Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6n12
         (531 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    29   2.1  
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      29   2.1  
AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical ...    29   2.7  
AC024801-4|AAF59648.4|  485|Caenorhabditis elegans Hypothetical ...    29   2.7  
U64837-2|AAB04836.3|  213|Caenorhabditis elegans Hypothetical pr...    28   4.8  
U50069-2|AAB37558.1|  328|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 234 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 329
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 234 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 329
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 234 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 329
           ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 66  NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.4 protein.
          Length = 451

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 12  YKXPEVEXXLRTFGNCLXGLVDLNVLKTEIEEAKPN 119
           ++ PE E  +RT G+   G++D+N  +   + A+PN
Sbjct: 61  FEKPEFEVEIRTNGHIYAGILDINGAEPGDKGAEPN 96


>AC024801-4|AAF59648.4|  485|Caenorhabditis elegans Hypothetical
           protein Y50D7A.3a protein.
          Length = 485

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 510 LRVSVWNTLRGISR-YRRSSHQLLRIFQQGSSYWRIPQWGSSVSNLKSM 367
           L V ++  L G +  Y R    +LR+ QQG   +R  QW +  +  K++
Sbjct: 226 LGVIMYTLLAGCAPFYHRKQLMMLRLIQQGKFEFRNEQWANITAEAKNL 274


>U64837-2|AAB04836.3|  213|Caenorhabditis elegans Hypothetical
           protein T27E4.5 protein.
          Length = 213

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +3

Query: 318 AEGGPECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEEC 491
           A   PE  ++KTE  KTC   L+ ++   +++     V+ C K D+   C+  ++++C
Sbjct: 132 ANHSPE-IERKTEEFKTCPSQLQMAYFCQKTSTARKTVKPC-KTDQ--DCMFSNVQKC 185


>U50069-2|AAB37558.1|  328|Caenorhabditis elegans Hypothetical
           protein C09B9.2 protein.
          Length = 328

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = +3

Query: 291 DGDRIALFIAEGGPECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTS 464
           DGD+++L  +     C      + K      +   P  E +N LS   +C K DEM S
Sbjct: 262 DGDKVSLSTSNTTQACIHVPNSSKKHKKRGSRSRSPHHEKSN-LSKYNRCQKQDEMLS 318


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,619,477
Number of Sequences: 27780
Number of extensions: 229539
Number of successful extensions: 708
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)