Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6n01
(690 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0096 - 22777684-22777797,22778668-22779047,22779162-227793... 224 6e-59
05_06_0043 + 25143513-25143866,25144010-25144191,25144284-251443... 197 6e-51
01_06_0849 + 32433429-32433743,32433840-32434021,32434235-324343... 188 3e-48
08_01_0255 + 2089543-2089583,2089696-2090089,2090797-2090862,209... 30 1.5
12_01_1041 - 10711362-10711428,10711571-10712262,10712622-107127... 30 2.0
11_01_0143 + 1177220-1177462,1177727-1177855,1178114-1178170,117... 29 3.5
06_01_0360 + 2581774-2582288,2582414-2582609 29 3.5
03_06_0441 - 33961268-33961633 29 3.5
02_04_0404 + 22626709-22628601 28 6.1
03_06_0766 - 36106116-36106230,36106598-36106716,36106880-361069... 28 8.0
>04_04_0096 -
22777684-22777797,22778668-22779047,22779162-22779373,
22780119-22780561
Length = 382
Score = 224 bits (547), Expect = 6e-59
Identities = 97/141 (68%), Positives = 116/141 (82%)
Frame = +1
Query: 241 PPWLKTTIPTGSKFNEIKQQLRSLKLSTVCEEARCPNIGECWSGGKHGASTATIMLMGDT 420
P W+K TIP G+K+ IK +LR LKL TVCEEARCPN+GECWSGG+ G +TATIM++GDT
Sbjct: 83 PKWMKETIPGGAKYAGIKAKLRELKLHTVCEEARCPNLGECWSGGETGTATATIMILGDT 142
Query: 421 CTRGCMFCSVKTSRNPPPLDPEEPRNTAHAINQWGVGYIVLTSVDRDDLPDGGSLHFAET 600
CTRGC FC+VKTSR PPP DP+EP N A AI WG+ YIV+TSVDRDDLPD GS HFAET
Sbjct: 143 CTRGCRFCNVKTSRTPPPPDPDEPSNVAQAIASWGLEYIVITSVDRDDLPDQGSGHFAET 202
Query: 601 VKEIKKLNKDILVECLVPDFR 663
V+++K L ++L+E LVPDFR
Sbjct: 203 VQKLKVLKPEMLIEALVPDFR 223
>05_06_0043 +
25143513-25143866,25144010-25144191,25144284-25144374,
25144452-25144568,25144922-25144976,25145008-25145093,
25145190-25145300,25145564-25145608,25145695-25145740,
25146078-25146152,25146902-25146971,25147128-25147437,
25147778-25147851,25147996-25148151,25148416-25148539
Length = 631
Score = 197 bits (481), Expect = 6e-51
Identities = 92/155 (59%), Positives = 107/155 (69%), Gaps = 6/155 (3%)
Frame = +1
Query: 217 GESERLRLPPWLKTTIPTGSKFNEIKQQLRSLKLSTVCEEARCPNIGECWSGGK------ 378
G R P WL+ G K+ +++ L LKL+TVC EA+CPNIGECW GG
Sbjct: 71 GRDPAARKPAWLRQRAAQGEKYARLRESLGELKLNTVCVEAQCPNIGECWDGGGGAGGDG 130
Query: 379 HGASTATIMLMGDTCTRGCMFCSVKTSRNPPPLDPEEPRNTAHAINQWGVGYIVLTSVDR 558
G +TATIML+GDTCTRGC FC+VKTS PPP D EP TA A+ WGV Y+VLTSVDR
Sbjct: 131 DGIATATIMLLGDTCTRGCRFCAVKTSNKPPPPDALEPLRTAVAVASWGVDYVVLTSVDR 190
Query: 559 DDLPDGGSLHFAETVKEIKKLNKDILVECLVPDFR 663
DDLPDGGS HFA+TVK +K+L ILVECL DFR
Sbjct: 191 DDLPDGGSGHFAQTVKALKELKPGILVECLTSDFR 225
>01_06_0849 +
32433429-32433743,32433840-32434021,32434235-32434310,
32434413-32434570,32435567-32435738,32435817-32435927,
32436197-32436280
Length = 365
Score = 188 bits (459), Expect = 3e-48
Identities = 88/155 (56%), Positives = 107/155 (69%), Gaps = 6/155 (3%)
Frame = +1
Query: 217 GESERLRLPPWLKTTIPTGSKFNEIKQQLRSLKLSTVCEEARCPNIGECWSGGK------ 378
G ++ P WL+ G K+ +++ + LKL+TVC EA+CPNIGECW+GG
Sbjct: 58 GRDPEVKKPAWLRQRAAQGEKYARLRESIGELKLNTVCVEAQCPNIGECWNGGGGAGGEG 117
Query: 379 HGASTATIMLMGDTCTRGCMFCSVKTSRNPPPLDPEEPRNTAHAINQWGVGYIVLTSVDR 558
G +TATIM++GDTCTRGC FC+VKTS PPP DP EP NTA A+ WGV Y+VLTSVDR
Sbjct: 118 DGIATATIMVLGDTCTRGCRFCAVKTSNKPPPPDPLEPLNTALAVASWGVDYVVLTSVDR 177
Query: 559 DDLPDGGSLHFAETVKEIKKLNKDILVECLVPDFR 663
DDLPDGGS HFA+T +L ILVECL DFR
Sbjct: 178 DDLPDGGSSHFAQT-----ELKPGILVECLTSDFR 207
>08_01_0255 +
2089543-2089583,2089696-2090089,2090797-2090862,
2091067-2091189,2091605-2091685,2091765-2091857,
2092103-2092178,2092255-2092334,2092433-2092504,
2092937-2092996,2093177-2093273,2093498-2093561,
2093706-2093765,2093942-2094035
Length = 466
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 199 CLDIHPNFLDDVQMFGDFILFNCVAN 122
C +IH N++D + GDF+L V N
Sbjct: 321 CAEIHSNYVDCTKWLGDFVLSKSVEN 346
>12_01_1041 -
10711362-10711428,10711571-10712262,10712622-10712777,
10712885-10713957,10714422-10714524,10714694-10714876,
10715007-10715099,10715379-10715564,10716530-10716793
Length = 938
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 190 YQGKLKREKGESERLRLP--PWLKTTIPTG 273
Y+ ++ EKG ER RLP PW T PTG
Sbjct: 691 YKERILSEKGRRERERLPDRPWKIKTNPTG 720
>11_01_0143 +
1177220-1177462,1177727-1177855,1178114-1178170,
1178369-1178601,1178880-1178971,1179116-1179330,
1180153-1180161
Length = 325
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 256 TTIPTGSKFNEIKQQ-LRSLKLSTVCEEARCPNIGECWSGG 375
TT P G+ +++ +++ ++ LK++ CE C + W+GG
Sbjct: 264 TTAPQGADYHKCREEVVKLLKVNAPCETKNC-SFNGVWNGG 303
>06_01_0360 + 2581774-2582288,2582414-2582609
Length = 236
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 457 SRNPPPLDPEEPRNTAHAINQWGVGYIVLTSVDRDDLP 570
S PPP E R++A A + GVG +++ S D +P
Sbjct: 38 SEQPPPTQQMERRSSAAAAAEEGVGVVLVGSGDPGRIP 75
>03_06_0441 - 33961268-33961633
Length = 121
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 196 GKLKREKGESERLRLPPWLKTTIPTGSKFNEI 291
G+ +RE E ERLRL W + P G + + +
Sbjct: 70 GERRREAEEGERLRLERWWRVATPLGFESDNV 101
>02_04_0404 + 22626709-22628601
Length = 630
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -2
Query: 656 SGTRHSTRMSLLSFLISLTVSAKCSEPPSGKSSLSTEVSTIYPTP 522
+G +S R +SFL+ T A P G++ L+ +++ P+P
Sbjct: 125 AGGENSGRKRKVSFLLERTDDAPMEMAPDGRTRLAARSASLSPSP 169
>03_06_0766 - 36106116-36106230,36106598-36106716,36106880-36106960,
36107062-36107118,36107350-36107373,36107810-36107909,
36107983-36108053,36108132-36108236,36108674-36108847,
36109406-36109555,36109701-36109871,36109968-36110024,
36110107-36110142,36110165-36110357,36110439-36110578,
36110960-36111166,36111442-36111498,36111711-36111809,
36112289-36112408,36112865-36113032,36113450-36113510,
36113611-36113720,36114132-36114263,36114344-36114511,
36115118-36115182,36115242-36115372,36115450-36115487,
36116272-36116373,36116480-36116537,36117479-36117580,
36117695-36117909,36118158-36118307,36118699-36118858,
36118984-36119042,36119287-36119443,36119536-36119681,
36121376-36121648,36122889-36122891
Length = 1457
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 199 KLKREKGESERLRLPPWLKTTIPTGSKFNEIKQQLRSLK 315
++K++ GE++ +R W K S+ NE+K ++SL+
Sbjct: 939 EMKQKFGETDNVR-DEWCKKATDAESQINELKSMMQSLQ 976
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,326,013
Number of Sequences: 37544
Number of extensions: 418385
Number of successful extensions: 1211
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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