Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6n01
         (690 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023635-1|AAH23635.1|  372|Homo sapiens lipoic acid synthetase ...   261   2e-69
BC062751-1|AAH62751.1|  142|Homo sapiens LIAS protein protein.        122   1e-27
BC010446-1|AAH10446.1|  342|Homo sapiens transmembrane protein 5...    30   8.9  
AF186264-1|AAF00529.1|  342|Homo sapiens brain specific membrane...    30   8.9  

>BC023635-1|AAH23635.1|  372|Homo sapiens lipoic acid synthetase
           protein.
          Length = 372

 Score =  261 bits (639), Expect = 2e-69
 Identities = 114/161 (70%), Positives = 132/161 (81%)
 Frame = +1

Query: 181 WDEYQGKLKREKGESERLRLPPWLKTTIPTGSKFNEIKQQLRSLKLSTVCEEARCPNIGE 360
           WDEY+G LKR+KGE  RLRLPPWLKT IP G  +N++K  LR+L L TVCEEARCPNIGE
Sbjct: 59  WDEYKGNLKRQKGE--RLRLPPWLKTEIPMGKNYNKLKNTLRNLNLHTVCEEARCPNIGE 116

Query: 361 CWSGGKHGASTATIMLMGDTCTRGCMFCSVKTSRNPPPLDPEEPRNTAHAINQWGVGYIV 540
           CW GG++  +TATIMLMGDTCTRGC FCSVKT+RNPPPLD  EP NTA AI +WG+ Y+V
Sbjct: 117 CWGGGEYATATATIMLMGDTCTRGCRFCSVKTARNPPPLDASEPYNTAKAIAEWGLDYVV 176

Query: 541 LTSVDRDDLPDGGSLHFAETVKEIKKLNKDILVECLVPDFR 663
           LTSVDRDD+PDGG+ H A+TV  +K+ N  ILVECL PDFR
Sbjct: 177 LTSVDRDDMPDGGAEHIAKTVSYLKERNPKILVECLTPDFR 217


>BC062751-1|AAH62751.1|  142|Homo sapiens LIAS protein protein.
          Length = 142

 Score =  122 bits (294), Expect = 1e-27
 Identities = 52/76 (68%), Positives = 62/76 (81%)
 Frame = +1

Query: 181 WDEYQGKLKREKGESERLRLPPWLKTTIPTGSKFNEIKQQLRSLKLSTVCEEARCPNIGE 360
           WDEY+G LKR+KGE  RLRLPPWLKT IP G  +N++K  LR+L L TVCEEARCPNIGE
Sbjct: 59  WDEYKGNLKRQKGE--RLRLPPWLKTEIPMGKNYNKLKNTLRNLNLHTVCEEARCPNIGE 116

Query: 361 CWSGGKHGASTATIML 408
           CW GG++  +TATIM+
Sbjct: 117 CWGGGEYATATATIMV 132


>BC010446-1|AAH10446.1|  342|Homo sapiens transmembrane protein
           59-like protein.
          Length = 342

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
 Frame = -2

Query: 584 SEPPSGKSSLSTEVSTIYPTPHWLIACAVFLXXXXXXXXGFLDVFT----EQNMQPLVQV 417
           SE P     LS  +S     P W++AC +FL            + T        QPL   
Sbjct: 247 SEEPQDNDFLSC-MSRRSGLPRWILACCLFLSVLVMLWLSCSTLVTAPGQHLKFQPLTLE 305

Query: 416 SPINMMVAVDAPCFPPLQHS 357
                M+  D P +PP  H+
Sbjct: 306 QHKGFMMEPDWPLYPPPSHA 325


>AF186264-1|AAF00529.1|  342|Homo sapiens brain specific
           membrane-anchored protein BSMAP protein.
          Length = 342

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
 Frame = -2

Query: 584 SEPPSGKSSLSTEVSTIYPTPHWLIACAVFLXXXXXXXXGFLDVFT----EQNMQPLVQV 417
           SE P     LS  +S     P W++AC +FL            + T        QPL   
Sbjct: 247 SEEPQDNDFLSC-MSRRSGLPRWILACCLFLSVLVMLWLSCSTLVTAPGQHLKFQPLTLE 305

Query: 416 SPINMMVAVDAPCFPPLQHS 357
                M+  D P +PP  H+
Sbjct: 306 QHKGFMMEPDWPLYPPPSHA 325


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,303,436
Number of Sequences: 237096
Number of extensions: 2372550
Number of successful extensions: 7917
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7904
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)