Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6n01
         (690 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003750-1|AAO41414.1|  380|Drosophila melanogaster RH26374p pro...   280   1e-75
AY058557-1|AAL13786.1|  380|Drosophila melanogaster LD24887p pro...   280   1e-75
AE014296-3361|AAF51596.1|  380|Drosophila melanogaster CG5231-PA...   280   1e-75
AE014296-3362|AAN12131.1|  190|Drosophila melanogaster CG5231-PB...   225   4e-59
BT015954-1|AAV36839.1|  462|Drosophila melanogaster SD11903p pro...    33   0.48 
AY060456-1|AAL25495.1|  190|Drosophila melanogaster SD02661p pro...    33   0.48 
AE014134-2122|AAF53141.1|  462|Drosophila melanogaster CG5202-PA...    33   0.48 
L41867-1|AAA86427.1|  425|Drosophila melanogaster extra sex comb...    32   0.64 
AY069796-1|AAL39941.1|  425|Drosophila melanogaster SD03549p pro...    32   0.64 
AE014134-2101|AAF53124.1|  425|Drosophila melanogaster CG14941-P...    32   0.64 
U43582-1|AAC46969.1|  966|Drosophila melanogaster KSR protein.         30   3.4  
AE013599-2601|ABC66053.1|  190|Drosophila melanogaster CG34005-P...    29   6.0  
AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-P...    29   7.9  

>BT003750-1|AAO41414.1|  380|Drosophila melanogaster RH26374p
           protein.
          Length = 380

 Score =  280 bits (686), Expect = 1e-75
 Identities = 123/161 (76%), Positives = 135/161 (83%)
 Frame = +1

Query: 181 WDEYQGKLKREKGESERLRLPPWLKTTIPTGSKFNEIKQQLRSLKLSTVCEEARCPNIGE 360
           W++Y GKL+REKGE +RLRLPPWLKTTIP G  + +IK Q+R LKLSTVCEEARCPNIGE
Sbjct: 57  WEQYDGKLRREKGEEQRLRLPPWLKTTIPVGKNYAKIKAQMRELKLSTVCEEARCPNIGE 116

Query: 361 CWSGGKHGASTATIMLMGDTCTRGCMFCSVKTSRNPPPLDPEEPRNTAHAINQWGVGYIV 540
           CW GG+HG  TATIMLMGDTCTRGC FCSVKT+R PPPLD  EP NTA AI  WG+ YIV
Sbjct: 117 CWGGGEHGTQTATIMLMGDTCTRGCRFCSVKTARKPPPLDVNEPVNTATAIASWGLDYIV 176

Query: 541 LTSVDRDDLPDGGSLHFAETVKEIKKLNKDILVECLVPDFR 663
           LTSVDRDDLPDGGS H AETV+EIK  N +I VECLVPDFR
Sbjct: 177 LTSVDRDDLPDGGSEHIAETVREIKARNSNIFVECLVPDFR 217


>AY058557-1|AAL13786.1|  380|Drosophila melanogaster LD24887p
           protein.
          Length = 380

 Score =  280 bits (686), Expect = 1e-75
 Identities = 123/161 (76%), Positives = 135/161 (83%)
 Frame = +1

Query: 181 WDEYQGKLKREKGESERLRLPPWLKTTIPTGSKFNEIKQQLRSLKLSTVCEEARCPNIGE 360
           W++Y GKL+REKGE +RLRLPPWLKTTIP G  + +IK Q+R LKLSTVCEEARCPNIGE
Sbjct: 57  WEQYDGKLRREKGEEQRLRLPPWLKTTIPVGKNYAKIKAQMRELKLSTVCEEARCPNIGE 116

Query: 361 CWSGGKHGASTATIMLMGDTCTRGCMFCSVKTSRNPPPLDPEEPRNTAHAINQWGVGYIV 540
           CW GG+HG  TATIMLMGDTCTRGC FCSVKT+R PPPLD  EP NTA AI  WG+ YIV
Sbjct: 117 CWGGGEHGTQTATIMLMGDTCTRGCRFCSVKTARKPPPLDVNEPVNTATAIASWGLDYIV 176

Query: 541 LTSVDRDDLPDGGSLHFAETVKEIKKLNKDILVECLVPDFR 663
           LTSVDRDDLPDGGS H AETV+EIK  N +I VECLVPDFR
Sbjct: 177 LTSVDRDDLPDGGSEHIAETVREIKARNSNIFVECLVPDFR 217


>AE014296-3361|AAF51596.1|  380|Drosophila melanogaster CG5231-PA,
           isoform A protein.
          Length = 380

 Score =  280 bits (686), Expect = 1e-75
 Identities = 123/161 (76%), Positives = 135/161 (83%)
 Frame = +1

Query: 181 WDEYQGKLKREKGESERLRLPPWLKTTIPTGSKFNEIKQQLRSLKLSTVCEEARCPNIGE 360
           W++Y GKL+REKGE +RLRLPPWLKTTIP G  + +IK Q+R LKLSTVCEEARCPNIGE
Sbjct: 57  WEQYDGKLRREKGEEQRLRLPPWLKTTIPVGKNYAKIKAQMRELKLSTVCEEARCPNIGE 116

Query: 361 CWSGGKHGASTATIMLMGDTCTRGCMFCSVKTSRNPPPLDPEEPRNTAHAINQWGVGYIV 540
           CW GG+HG  TATIMLMGDTCTRGC FCSVKT+R PPPLD  EP NTA AI  WG+ YIV
Sbjct: 117 CWGGGEHGTQTATIMLMGDTCTRGCRFCSVKTARKPPPLDVNEPVNTATAIASWGLDYIV 176

Query: 541 LTSVDRDDLPDGGSLHFAETVKEIKKLNKDILVECLVPDFR 663
           LTSVDRDDLPDGGS H AETV+EIK  N +I VECLVPDFR
Sbjct: 177 LTSVDRDDLPDGGSEHIAETVREIKARNSNIFVECLVPDFR 217


>AE014296-3362|AAN12131.1|  190|Drosophila melanogaster CG5231-PB,
           isoform B protein.
          Length = 190

 Score =  225 bits (550), Expect = 4e-59
 Identities = 97/127 (76%), Positives = 107/127 (84%)
 Frame = +1

Query: 181 WDEYQGKLKREKGESERLRLPPWLKTTIPTGSKFNEIKQQLRSLKLSTVCEEARCPNIGE 360
           W++Y GKL+REKGE +RLRLPPWLKTTIP G  + +IK Q+R LKLSTVCEEARCPNIGE
Sbjct: 57  WEQYDGKLRREKGEEQRLRLPPWLKTTIPVGKNYAKIKAQMRELKLSTVCEEARCPNIGE 116

Query: 361 CWSGGKHGASTATIMLMGDTCTRGCMFCSVKTSRNPPPLDPEEPRNTAHAINQWGVGYIV 540
           CW GG+HG  TATIMLMGDTCTRGC FCSVKT+R PPPLD  EP NTA AI  WG+ YIV
Sbjct: 117 CWGGGEHGTQTATIMLMGDTCTRGCRFCSVKTARKPPPLDVNEPVNTATAIASWGLDYIV 176

Query: 541 LTSVDRD 561
           LTSVDRD
Sbjct: 177 LTSVDRD 183


>BT015954-1|AAV36839.1|  462|Drosophila melanogaster SD11903p
           protein.
          Length = 462

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 214 FPFSACLDIHPNFLDDVQMFGDFILFNCVAN 122
           FP  +  DIH N++D VQ FGDF+      N
Sbjct: 317 FPDFSTRDIHRNYVDCVQWFGDFVFSKSCEN 347


>AY060456-1|AAL25495.1|  190|Drosophila melanogaster SD02661p
           protein.
          Length = 190

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 214 FPFSACLDIHPNFLDDVQMFGDFILFNCVAN 122
           FP  +  DIH N++D VQ FGDF+      N
Sbjct: 45  FPDFSTRDIHRNYVDCVQWFGDFVFSKSCEN 75


>AE014134-2122|AAF53141.1|  462|Drosophila melanogaster CG5202-PA,
           isoform A protein.
          Length = 462

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 214 FPFSACLDIHPNFLDDVQMFGDFILFNCVAN 122
           FP  +  DIH N++D VQ FGDF+      N
Sbjct: 317 FPDFSTRDIHRNYVDCVQWFGDFVFSKSCEN 347


>L41867-1|AAA86427.1|  425|Drosophila melanogaster extra sex combs
           protein.
          Length = 425

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 214 FPFSACLDIHPNFLDDVQMFGDFILFNCVAN 122
           FP  +  DIH N++D VQ FG+F+L     N
Sbjct: 276 FPDFSTRDIHRNYVDCVQWFGNFVLSKSCEN 306


>AY069796-1|AAL39941.1|  425|Drosophila melanogaster SD03549p
           protein.
          Length = 425

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 214 FPFSACLDIHPNFLDDVQMFGDFILFNCVAN 122
           FP  +  DIH N++D VQ FG+F+L     N
Sbjct: 276 FPDFSTRDIHRNYVDCVQWFGNFVLSKSCEN 306


>AE014134-2101|AAF53124.1|  425|Drosophila melanogaster CG14941-PA
           protein.
          Length = 425

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 214 FPFSACLDIHPNFLDDVQMFGDFILFNCVAN 122
           FP  +  DIH N++D VQ FG+F+L     N
Sbjct: 276 FPDFSTRDIHRNYVDCVQWFGNFVLSKSCEN 306


>U43582-1|AAC46969.1|  966|Drosophila melanogaster KSR protein.
          Length = 966

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
 Frame = +1

Query: 313 KLSTVCEEARCPNIGECWSGGKHGASTATIMLMGDTCTRGCMFCSVKTSRNPPPLDPEEP 492
           KLST   + R P   EC    K   S  T+ L G   T       V+        D  + 
Sbjct: 605 KLSTAGVDKRTPFTSECTDTHKSNDSDKTVSLSGSASTDSDR-TPVRVDSTEDG-DSGQW 662

Query: 493 RNTAHAINQWGVGYIVLTSVDRDDLPDGGSLHFA--ETVKEIKKLNKDILV-ECLVPDFR 663
           R  + ++ +W + Y  L  ++R      G++H A       +K LN+D L  E ++  FR
Sbjct: 663 RQNSISLKEWDIPYGDLLLLERIGQGRFGTVHRALWHGDVAVKLLNEDYLQDEHMLETFR 722

Query: 664 A 666
           +
Sbjct: 723 S 723


>AE013599-2601|ABC66053.1|  190|Drosophila melanogaster CG34005-PA
           protein.
          Length = 190

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -1

Query: 630 VLVELFDLFNCFGKMQRTSIW*VVSIN*GKYNISDTPLV 514
           VL E  D FNCF KM +  +  V SI+   +N ++  L+
Sbjct: 111 VLTEAVDFFNCFAKMAKLQLANVYSIS---FNATEQALI 146


>AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-PA
           protein.
          Length = 9196

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 638 TRMSLLSFLISLTVSAKCSEPPSGKSSLSTE 546
           T+ SL S L+++T S++   PP GKS L  E
Sbjct: 506 TQKSLTSELVTMTDSSEYKFPPEGKSILGKE 536


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,905,247
Number of Sequences: 53049
Number of extensions: 701899
Number of successful extensions: 1990
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)