Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6n01
         (690 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46381-3|CAA86516.1|  354|Caenorhabditis elegans Hypothetical pr...   223   9e-59
Z73970-1|CAA98244.1|  254|Caenorhabditis elegans Hypothetical pr...    33   0.19 
U58757-4|AAC47922.3|  580|Caenorhabditis elegans Hypothetical pr...    31   0.78 
U39999-6|AAA81107.2|  198|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.     28   5.5  
U23179-7|AAC46721.1|  782|Caenorhabditis elegans Hypothetical pr...    27   9.6  
U00066-3|AAA50740.1|  177|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>Z46381-3|CAA86516.1|  354|Caenorhabditis elegans Hypothetical
           protein M01F1.3 protein.
          Length = 354

 Score =  223 bits (545), Expect = 9e-59
 Identities = 101/162 (62%), Positives = 128/162 (79%), Gaps = 3/162 (1%)
 Frame = +1

Query: 184 DEYQGKLKREKGESERLRLPPWLKTT--IPTGSK-FNEIKQQLRSLKLSTVCEEARCPNI 354
           ++Y+GKLK EKG+  RLRLPPWLK    +P+ ++  + +K+QL+ LKL+TVC+EARCPN+
Sbjct: 41  EKYEGKLKLEKGD-RRLRLPPWLKKEKILPSENENVSRLKKQLKHLKLATVCQEARCPNL 99

Query: 355 GECWSGGKHGASTATIMLMGDTCTRGCMFCSVKTSRNPPPLDPEEPRNTAHAINQWGVGY 534
           GECW G     +TATIMLMGDTCTRGC FCSVKT+R PPPLDP EP NT+ A+  WGV Y
Sbjct: 100 GECWGGSDDSLATATIMLMGDTCTRGCKFCSVKTARAPPPLDPMEPENTSTAVASWGVEY 159

Query: 535 IVLTSVDRDDLPDGGSLHFAETVKEIKKLNKDILVECLVPDF 660
           IVLTSVDRDDLPDGG+ H  +TV+ +K    ++L+ECL+PDF
Sbjct: 160 IVLTSVDRDDLPDGGADHLRKTVQLMKLKKPELLIECLLPDF 201


>Z73970-1|CAA98244.1|  254|Caenorhabditis elegans Hypothetical
           protein C29A12.1 protein.
          Length = 254

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 481 PEEPRNTAHAINQWGVGYIVLTSVDRDDLPDGG-SLHFAETVKEIKKLNKDILVECLVPD 657
           PE  RN      +W  G   LT    D+L D    +H AETV EI   +   ++ECLV  
Sbjct: 34  PENQRNLVAWAQKWMDGAGTLT----DELEDFSIRVHVAETVSEINPADNAPVMECLVDV 89

Query: 658 FRAVRGL 678
             A+  +
Sbjct: 90  VNAINSI 96


>U58757-4|AAC47922.3|  580|Caenorhabditis elegans Hypothetical
           protein C01B10.4 protein.
          Length = 580

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +1

Query: 181 WDEYQGKLKREKGESERLRLPPWLKTTIPTGSKFNEIKQQLRSLKLSTV 327
           W+E  G+  R +   E+     WLK  I    K  E K++L+ + L TV
Sbjct: 473 WNETTGERPRMRKYFEKEVTDYWLKEMIEFDQKVTETKKKLKQISLKTV 521


>U39999-6|AAA81107.2|  198|Caenorhabditis elegans Hypothetical
           protein F41G3.10 protein.
          Length = 198

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 313 KLSTVCEEARCPNIG--ECWSGGKHGASTATIMLMGDTCTRGCMFCS 447
           + ST C +   P  G  +C     +  ++A I LM   C R C +CS
Sbjct: 95  RTSTTCVDLTNPTTGVSDCTRMASYCNNSAYITLMRQQCPRTCGYCS 141


>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
          Length = 2684

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
 Frame = +1

Query: 157 TFGHRPKNWDEYQGKLKREKGESERLRLPPWLKTTIPTGS--KFNEIKQQLRSLKLSTVC 330
           T  H     ++Y+   +  +   E       +KTT P      FN  +  +   + S   
Sbjct: 29  TSSHEHDYTNDYEDPEEMARSRGEGFSNHLLIKTTPPPQPHPNFNSYEMSMSQQRRSQQH 88

Query: 331 EEARCPNIGECWSGGKH 381
           ++   P + +CW  G H
Sbjct: 89  QQPMAPPLSDCWGSGVH 105


>U23179-7|AAC46721.1|  782|Caenorhabditis elegans Hypothetical
           protein C27D6.1 protein.
          Length = 782

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +1

Query: 199 KLKREKGESERLR--LPPWLKTTIPTGSKFNEIKQ 297
           +L+REK E ER+R  +  W K  IP   K + +K+
Sbjct: 726 QLEREKKEGERIRSIIAKWEKRNIPKTEKSSPMKK 760


>U00066-3|AAA50740.1|  177|Caenorhabditis elegans Hypothetical
           protein R12B2.2 protein.
          Length = 177

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +1

Query: 184 DEYQGKLKREKGESERLRL 240
           DEY GKL  E  ES+RLR+
Sbjct: 65  DEYMGKLMVEDEESDRLRI 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,264,853
Number of Sequences: 27780
Number of extensions: 363293
Number of successful extensions: 1310
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)