Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6n01
         (690 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    26   0.29 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   2.1  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      23   2.7  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              22   4.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   4.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   4.8  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   4.8  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   6.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.4  

>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -2

Query: 644 HSTRMSLLSFL-ISLTVSAKCSEPPSGKSSLSTEVSTIYPTPHWLI 510
           H   + L SF+ I L + +KC    + + SL    + + P P ++I
Sbjct: 10  HLITVLLFSFVVILLIIPSKCEAVSNDRQSLEARSADLVPEPRYII 55


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 621 ELFDLFNCFGKMQRTSIW*VVSIN*GKYNIS-DTPLVDS 508
           E   L N  G+M+ T++  ++S++  +YN+    P +DS
Sbjct: 490 EFQSLNNAVGEMEATNVTNILSMDNTQYNLDLSLPQLDS 528


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -2

Query: 644 HSTRMSLLSFL-ISLTVSAKCSEPPSGKSSLSTEVSTIYPTPHWLI 510
           H   + L SF+ I L + +KC    +    L    + + P P ++I
Sbjct: 10  HLITVLLFSFVVILLIIPSKCEAVSNDMQPLEARSADLVPEPRYII 55


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 332 KKQGVLILENVGAEENTVHQLLPSC 406
           K QG+  +  +  +EN+V QL+  C
Sbjct: 80  KPQGIKAVMELLIDENSVKQLVSDC 104


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/35 (31%), Positives = 13/35 (37%)
 Frame = +1

Query: 181 WDEYQGKLKREKGESERLRLPPWLKTTIPTGSKFN 285
           WD Y         +S  L LP W     P G  F+
Sbjct: 172 WDYYYIYHTLVAEQSYGLTLPSWTNNIFPRGELFD 206


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/35 (31%), Positives = 13/35 (37%)
 Frame = +1

Query: 181 WDEYQGKLKREKGESERLRLPPWLKTTIPTGSKFN 285
           WD Y         +S  L LP W     P G  F+
Sbjct: 187 WDYYYIYHTLVAEQSYGLTLPSWTNNIFPRGELFD 221


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/35 (31%), Positives = 13/35 (37%)
 Frame = +1

Query: 181 WDEYQGKLKREKGESERLRLPPWLKTTIPTGSKFN 285
           WD Y         +S  L LP W     P G  F+
Sbjct: 75  WDYYYIYHTLVAEQSYGLTLPSWTNNIFPKGELFD 109


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/45 (22%), Positives = 19/45 (42%)
 Frame = -2

Query: 548 EVSTIYPTPHWLIACAVFLXXXXXXXXGFLDVFTEQNMQPLVQVS 414
           +VS I  +  W + C +FL            ++  +   PL +V+
Sbjct: 287 KVSYIKASEIWFLGCTIFLFAAMVEFAFVNTIYRRKKTVPLKKVN 331


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 166 HRPKNWDEYQGKLKREKGESERLRLPPWLKTTI 264
           HRP    + Q + ++++ E  RLR P  +K  +
Sbjct: 160 HRPYQQQQQQQQRQQQRQEERRLR-PDEIKVEV 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,364
Number of Sequences: 438
Number of extensions: 4061
Number of successful extensions: 29
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)