Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6m24
         (628 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    50   8e-08
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    50   8e-08
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    50   8e-08
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    50   8e-08
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    37   5e-04
AY146742-1|AAO12102.1|  154|Anopheles gambiae odorant-binding pr...    25   2.0  
AF437890-1|AAL84185.1|  154|Anopheles gambiae odorant binding pr...    25   2.0  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   3.4  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 49.6 bits (113), Expect = 8e-08
 Identities = 21/54 (38%), Positives = 31/54 (57%)
 Frame = +3

Query: 285 MTASIRFKGSLNVDLVEFKTNLIPFPRIHFPLVTFAPFVSPSRACHETMTTNQL 446
           +T  +RF G LN DL +   N++PFPR+HF +  FAP  S     +  +T  +L
Sbjct: 132 VTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 185


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 49.6 bits (113), Expect = 8e-08
 Identities = 21/54 (38%), Positives = 31/54 (57%)
 Frame = +3

Query: 285 MTASIRFKGSLNVDLVEFKTNLIPFPRIHFPLVTFAPFVSPSRACHETMTTNQL 446
           +T  +RF G LN DL +   N++PFPR+HF +  FAP  S     +  +T  +L
Sbjct: 132 VTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 185


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 49.6 bits (113), Expect = 8e-08
 Identities = 21/54 (38%), Positives = 31/54 (57%)
 Frame = +3

Query: 285 MTASIRFKGSLNVDLVEFKTNLIPFPRIHFPLVTFAPFVSPSRACHETMTTNQL 446
           +T  +RF G LN DL +   N++PFPR+HF +  FAP  S     +  +T  +L
Sbjct: 132 VTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 185


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 49.6 bits (113), Expect = 8e-08
 Identities = 21/54 (38%), Positives = 31/54 (57%)
 Frame = +3

Query: 285 MTASIRFKGSLNVDLVEFKTNLIPFPRIHFPLVTFAPFVSPSRACHETMTTNQL 446
           +T  +RF G LN DL +   N++PFPR+HF +  FAP  S     +  +T  +L
Sbjct: 132 VTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPEL 185


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 37.1 bits (82), Expect = 5e-04
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +2

Query: 59  MKEILHIHIGQAGVQAANACWE 124
           M+E + +H+GQAGVQ  N CW+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22


>AY146742-1|AAO12102.1|  154|Anopheles gambiae odorant-binding
           protein AgamOBP7 protein.
          Length = 154

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +2

Query: 206 SETGAGKFVPRVVMIDLEPT-PIG-CFLHDCFDKIQRFSERRSRRI*NKLNSISTD 367
           +E+GA +   R  +    PT P   C++H  FDKI    E   R + ++L  I  D
Sbjct: 50  AESGASEEQLRTCLDGTVPTAPAAKCYIHCLFDKIDVVDEATGRILLDRLLYIIPD 105


>AF437890-1|AAL84185.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +2

Query: 206 SETGAGKFVPRVVMIDLEPT-PIG-CFLHDCFDKIQRFSERRSRRI*NKLNSISTD 367
           +E+GA +   R  +    PT P   C++H  FDKI    E   R + ++L  I  D
Sbjct: 50  AESGASEEQLRTCLDGTVPTAPAAKCYIHCLFDKIDVVDEATGRILLDRLLYIIPD 105


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 510 ISCCLLFRGDVNPNDINATINHVKNSR 590
           +SC  +FR   NP   N T+ ++K  R
Sbjct: 321 LSCTPIFRSPPNPPWSNRTLRNLKKDR 347


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,167
Number of Sequences: 2352
Number of extensions: 13722
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)