Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6m23
(336 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81540-9|CAD89742.1| 740|Caenorhabditis elegans Hypothetical pr... 33 0.039
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 33 0.039
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 32 0.089
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 32 0.12
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 32 0.12
AL132862-15|CAB60549.1| 703|Caenorhabditis elegans Hypothetical... 32 0.12
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 31 0.21
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 30 0.36
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 30 0.36
Z72509-5|CAA96649.1| 294|Caenorhabditis elegans Hypothetical pr... 29 0.63
AL032632-7|CAA21586.1| 313|Caenorhabditis elegans Hypothetical ... 29 0.83
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 0.83
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 0.83
Z73098-10|CAA97336.2| 391|Caenorhabditis elegans Hypothetical p... 29 1.1
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 1.1
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 1.1
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 29 1.1
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 29 1.1
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 1.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 1.4
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 1.4
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 1.4
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 28 1.4
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 28 1.9
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z80219-3|CAN86593.1| 221|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z68004-3|CAA91983.2| 380|Caenorhabditis elegans Hypothetical pr... 28 1.9
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 1.9
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 28 1.9
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 28 1.9
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 28 1.9
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 28 1.9
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 28 1.9
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 28 1.9
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical pr... 27 2.5
AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen prot... 27 2.5
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 27 3.3
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 27 3.3
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z29443-10|CAA82578.2| 315|Caenorhabditis elegans Hypothetical p... 27 4.4
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 4.4
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 4.4
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 4.4
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 4.4
U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protei... 27 4.4
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 4.4
AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical ... 27 4.4
AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen prot... 27 4.4
AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical ... 27 4.4
AB121091-1|BAD14918.1| 315|Caenorhabditis elegans T-box transcr... 27 4.4
Z81547-1|CAB04459.1| 354|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z68009-4|CAA92006.1| 152|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z29561-5|CAA82668.1| 395|Caenorhabditis elegans Hypothetical pr... 26 5.8
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 26 5.8
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 26 5.8
U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical pr... 26 5.8
AF067213-2|AAC16999.1| 225|Caenorhabditis elegans Hypothetical ... 26 5.8
AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen prot... 26 5.8
AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein. 26 5.8
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 26 7.7
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 26 7.7
U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protei... 26 7.7
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 26 7.7
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 26 7.7
AL032637-9|CAA21621.1| 108|Caenorhabditis elegans Hypothetical ... 26 7.7
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 26 7.7
>Z81540-9|CAD89742.1| 740|Caenorhabditis elegans Hypothetical
protein F46B3.17 protein.
Length = 740
Score = 33.5 bits (73), Expect = 0.039
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +1
Query: 82 GNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAG 234
G +G N G P GYG G + G+ GV GNV G V+ P G
Sbjct: 283 GPMGKNGQPGAPGGYGSPGKQGSM---GSRGVAGNVGQDGVVLLNTKGPKG 330
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 33.5 bits (73), Expect = 0.039
Identities = 24/68 (35%), Positives = 29/68 (42%)
Frame = +1
Query: 40 GNPGCACNVRQPYAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEG 219
GNPG A AG G P G P G GE G+ G C + P F+
Sbjct: 260 GNPGSAGASEPGPAGPAGDAGPDGAPGNAGAPGAPGEAGAPGSGGGCDHCP-PPRTNFQ- 317
Query: 220 TVPAGGLV 243
T+P+ GLV
Sbjct: 318 TIPSLGLV 325
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 32.3 bits (70), Expect = 0.089
Identities = 24/66 (36%), Positives = 24/66 (36%)
Frame = +1
Query: 82 GNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVANNC 261
GN G P G P GD A GE G G G G G A G S N
Sbjct: 124 GNAGPEGPSGAPGADGDAAGPGEAGPAGPAGPPGPDGQPGAPGPNGQPGAAGTTS-TNEP 182
Query: 262 GCNGPA 279
G GPA
Sbjct: 183 GSPGPA 188
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 31.9 bits (69), Expect = 0.12
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +1
Query: 73 PYAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVG 201
P G G AP GG + G + G P+GG G G P G
Sbjct: 109 PIGGGYG-GAPIGGGSYAGAGPIGGGAPIGGGAGYAGAAPAGG 150
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 31.9 bits (69), Expect = 0.12
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +1
Query: 40 GNPGCACNVRQPYAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVP 192
GNPG A AG G P G P G GE G+ G C + P
Sbjct: 250 GNPGSAGASEPGPAGPAGDAGPDGAPGNAGAPGAPGEAGAPGSGGGCDHCP 300
>AL132862-15|CAB60549.1| 703|Caenorhabditis elegans Hypothetical
protein Y73F8A.21 protein.
Length = 703
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 275 GPLH-PQLLATLTNPPAGTVPSNITYPTTGTFPQTPVLPP 159
GP H PQ +T+T P TVPS+ T T FP P PP
Sbjct: 560 GPSHLPQCGSTVTQRP--TVPSSTTSSTFYNFPPPPGYPP 597
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 31.1 bits (67), Expect = 0.21
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = -2
Query: 242 TNPPAGTVPSNITYP----TTGTFPQTPVLPPTGNSPDTAT 132
TNPP T P + P T+ T P PPT + P TA+
Sbjct: 263 TNPPTATSPKTSSQPVSSSTSSTSSPAPTNPPTTSRPTTAS 303
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 30.3 bits (65), Expect = 0.36
Identities = 20/62 (32%), Positives = 21/62 (33%)
Frame = +1
Query: 82 GNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVANNC 261
G G P GGP G G GN G GN G+ G GG A C
Sbjct: 226 GKAGPAGPAGGPGNNGSAGTPGPAGPAGNPGTPGNKGSDGHPGTPGA--PGGPGHDAAYC 283
Query: 262 GC 267
C
Sbjct: 284 AC 285
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 30.3 bits (65), Expect = 0.36
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +1
Query: 49 GCACNVRQPYAGNVGC-NAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTV 225
G C Q GN C N+ C P+G +V +G GG+ G C + V TV
Sbjct: 522 GFQCQFAQQCLGNSQCLNSICQCPSGSSNV--NGYCQ-GGSNGQCNSNQVYYNNQCYNTV 578
Query: 226 PAGGLVSVANNC 261
P G + C
Sbjct: 579 PIGSQCQITQQC 590
>Z72509-5|CAA96649.1| 294|Caenorhabditis elegans Hypothetical
protein F32G8.5 protein.
Length = 294
Score = 29.5 bits (63), Expect = 0.63
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = +1
Query: 82 GNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAG--GLVSVAN 255
G G N G P G+V G+ GN G G + G G+ G G V
Sbjct: 160 GRPGENGADGNPGAPGEVGAPGDQGGAGNQGAAGKPGLPGKNGQRGSGHPGPTGPVGETG 219
Query: 256 NCGCNG 273
N G NG
Sbjct: 220 NAGNNG 225
Score = 26.6 bits (56), Expect = 4.4
Identities = 29/89 (32%), Positives = 32/89 (35%), Gaps = 9/89 (10%)
Frame = +1
Query: 40 GNPGCACNVRQPY----AGNVGCNAPCG-----GPAGYGDVAVSGELPVGGNTGVCGNVP 192
GNPG V P AGN G G G G G +G + GN G G+
Sbjct: 169 GNPGAPGEVGAPGDQGGAGNQGAAGKPGLPGKNGQRGSGHPGPTGPVGETGNAGNNGHPG 228
Query: 193 VVGYVMFEGTVPAGGLVSVANNCGCNGPA 279
V G GT GL G GPA
Sbjct: 229 VDGENGKPGTRGEAGLQGKEGQTGPIGPA 257
>AL032632-7|CAA21586.1| 313|Caenorhabditis elegans Hypothetical
protein Y11D7A.11 protein.
Length = 313
Score = 29.1 bits (62), Expect = 0.83
Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Frame = +1
Query: 40 GNPGCACNVRQP-YAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFE 216
GNPG N +P G G N CG P G+ +GE G G G V + +
Sbjct: 178 GNPGPQGNSGRPGMDGMPGRNGRCGRPGEQGERGPNGEDGRPGRRGDDGMPGTVNEIPGQ 237
Query: 217 GTVPAGGLVSVANNCGCNGP 276
P GL G GP
Sbjct: 238 AGPP--GLRGAPGATGSQGP 255
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 0.83
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = +1
Query: 52 CACNVRQPYAGNVGCNAPC-GGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVP 228
C C R P G G + P GG GY G GG G G GY G
Sbjct: 311 CPCPPRTPAGGGGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAG--GYSGGGGGGG 368
Query: 229 AGGLVSVANNCGCNG 273
G N G G
Sbjct: 369 GGAAAGGGYNAGGGG 383
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.1 bits (62), Expect = 0.83
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2
Query: 254 LATLTNPPAGTVPSNITYPTTGTFPQTPVLPPTGNSP 144
LA PP TVPSNI TTG Q PT + P
Sbjct: 1429 LAPPVAPPTVTVPSNIAPSTTGHQSQQTRPTPTTHRP 1465
>Z73098-10|CAA97336.2| 391|Caenorhabditis elegans Hypothetical
protein T21C9.9 protein.
Length = 391
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 247 RSPILQPALYPRTSHIPLQARSRRRQCCHPRAIHPTRP 134
R P Q A YP+ P Q+ + Q +PR I P P
Sbjct: 67 RQPYYQTASYPQYQQGPAQSLQQMYQLPNPRYIQPQAP 104
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 28.7 bits (61), Expect = 1.1
Identities = 21/78 (26%), Positives = 29/78 (37%)
Frame = +1
Query: 40 GNPGCACNVRQPYAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEG 219
G PG + P G G + G P G G+ G +G+ G +VG+ G
Sbjct: 650 GGPGYSGEAGAP--GQNGMDGYPGAPGDQGYPGSPGQDGYPGPSGIPGEDGLVGFPGLRG 707
Query: 220 TVPAGGLVSVANNCGCNG 273
GL + CG G
Sbjct: 708 EHGDNGLPGLEGECGEEG 725
Score = 26.6 bits (56), Expect = 4.4
Identities = 21/66 (31%), Positives = 24/66 (36%)
Frame = +1
Query: 79 AGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVANN 258
AG G G P YG+ GE +GG G G G E P G +
Sbjct: 302 AGQRGKRGKDGVPGNYGEKGSQGEQGLGGTPGYPGTKGGAG----EPGYP--GRPGFEGD 355
Query: 259 CGCNGP 276
CG GP
Sbjct: 356 CGPEGP 361
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 28.7 bits (61), Expect = 1.1
Identities = 21/78 (26%), Positives = 29/78 (37%)
Frame = +1
Query: 40 GNPGCACNVRQPYAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEG 219
G PG + P G G + G P G G+ G +G+ G +VG+ G
Sbjct: 907 GGPGYSGEAGAP--GQNGMDGYPGAPGDQGYPGSPGQDGYPGPSGIPGEDGLVGFPGLRG 964
Query: 220 TVPAGGLVSVANNCGCNG 273
GL + CG G
Sbjct: 965 EHGDNGLPGLEGECGEEG 982
Score = 26.6 bits (56), Expect = 4.4
Identities = 21/66 (31%), Positives = 24/66 (36%)
Frame = +1
Query: 79 AGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVANN 258
AG G G P YG+ GE +GG G G G E P G +
Sbjct: 302 AGQRGKRGKDGVPGNYGEKGSQGEQGLGGTPGYPGTKGGAG----EPGYP--GRPGFEGD 355
Query: 259 CGCNGP 276
CG GP
Sbjct: 356 CGPEGP 361
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 28.7 bits (61), Expect = 1.1
Identities = 21/78 (26%), Positives = 29/78 (37%)
Frame = +1
Query: 40 GNPGCACNVRQPYAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEG 219
G PG + P G G + G P G G+ G +G+ G +VG+ G
Sbjct: 906 GGPGYSGEAGAP--GQNGMDGYPGAPGDQGYPGSPGQDGYPGPSGIPGEDGLVGFPGLRG 963
Query: 220 TVPAGGLVSVANNCGCNG 273
GL + CG G
Sbjct: 964 EHGDNGLPGLEGECGEEG 981
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 76 YAGNVGCNAPCGGPAGYGDVAVSG 147
Y GN G NAP GG GY V G
Sbjct: 3 YHGNGGYNAPYGGHGGYAPPPVHG 26
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 76 YAGNVGCNAPCGGPAGYGDVAVSG 147
Y GN G NAP GG GY V G
Sbjct: 3 YYGNGGYNAPYGGHGGYAPPPVHG 26
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -1
Query: 249 HAHQSSSRHCTLEHHISHYRHVPADASVATHGQF-TRHGH 133
H H H HH H H A A HG+ T HGH
Sbjct: 455 HGHHGEHHHAPA-HHGHHGEHHHAPAHHGHHGEHGTHHGH 493
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 249 HAHQSSSRHCTLEHHISHYRHVPADASVATHGQF-TRHGH 133
H H S H + HH H H A A HG+ T HGH
Sbjct: 491 HGHHGS--HHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGH 528
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = -1
Query: 252 GHAHQSSSRHCTLE-HHISHYRHVPADASVATHGQF-TRHGH 133
G H+ ++ H HH H H S A HG+ T HGH
Sbjct: 387 GEHHEHAAHHDEHGVHHRHHGEHHGTHHSPAHHGEHGTHHGH 428
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -1
Query: 249 HAHQSSSRHCTLEHHISHYRHVPADASVATHGQFTRHGH 133
H H H HH H H S A HG H H
Sbjct: 426 HGHHGEHHHAPA-HHGHHESHGHGHHSPAHHGHHGEHHH 463
Score = 25.8 bits (54), Expect = 7.7
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -1
Query: 252 GHAHQSSSRHCTLEHHISHYRHVPADASVATHGQFTRHGH 133
G H + + H H +H+ H + S A HG H H
Sbjct: 472 GEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHH 511
Score = 25.8 bits (54), Expect = 7.7
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -1
Query: 252 GHAHQSSSRHCTLEHHISHYRHVPADASVATHGQFTRHGH 133
G H + + H H +H+ H + S A HG H H
Sbjct: 530 GEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHH 569
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 1.4
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 82 GNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVANNC 261
G GC CGG G G P GG G G G P GG
Sbjct: 30 GGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCG-GGGG 88
Query: 262 GCNG 273
GC G
Sbjct: 89 GCGG 92
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 1.4
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 82 GNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVANNC 261
G GC CGG G G P GG G G G P GG
Sbjct: 30 GGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCG-GGGG 88
Query: 262 GCNG 273
GC G
Sbjct: 89 GCGG 92
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 1.4
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = -2
Query: 257 LLATLTNP--PAGT--VPSNITYPTTGTFPQTPVLPPTGNSPDTATS 129
LL TLT P P T VPS+ T PTT T T +P TS
Sbjct: 571 LLTTLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTS 617
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 224 TVPSNITYPTTGTFPQTPV-LPPTGNSP 144
T S ++ PTT T P TP +P T N+P
Sbjct: 473 TTVSTMSPPTTVTVPTTPTPVPTTTNTP 500
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 1.4
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = -2
Query: 257 LLATLTNP--PAGT--VPSNITYPTTGTFPQTPVLPPTGNSPDTATS 129
LL TLT P P T VPS+ T PTT T T +P TS
Sbjct: 627 LLTTLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTS 673
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 224 TVPSNITYPTTGTFPQTPV-LPPTGNSP 144
T S ++ PTT T P TP +P T N+P
Sbjct: 473 TTVSTMSPPTTVTVPTTPTPVPTTTNTP 500
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -2
Query: 266 HPQLLATLTNPPAGTVPSNITYPTTGTFPQTPVLPPTGNSPDTATS 129
H L +TLT+ T PS + +T T TP+ T +P+T ++
Sbjct: 42 HTMLPSTLTSVDMET-PSTLVLSSTPTSSSTPIKETTTTAPETTST 86
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 229 PALYPRTSHIPLQARSRRRQC-CHPRAIHPTRPHRRSQLDHHTGHCTPHFQHMADER 62
P+L PRT+ I + RRR+ ++P + HR L H P H AD R
Sbjct: 18 PSLLPRTAPIKKTRKHRRRRSGSFTGGVYPRKGHRNRSLLGHA--IPPPNVHSADWR 72
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 229 PALYPRTSHIPLQARSRRRQC-CHPRAIHPTRPHRRSQLDHHTGHCTPHFQHMADER 62
P+L PRT+ I + RRR+ ++P + HR L H P H AD R
Sbjct: 58 PSLLPRTAPIKKTRKHRRRRSGSFTGGVYPRKGHRNRSLLGHA--IPPPNVHSADWR 112
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 229 PALYPRTSHIPLQARSRRRQC-CHPRAIHPTRPHRRSQLDHHTGHCTPHFQHMADER 62
P+L PRT+ I + RRR+ ++P + HR L H P H AD R
Sbjct: 119 PSLLPRTAPIKKTRKHRRRRSGSFTGGVYPRKGHRNRSLLGHA--IPPPNVHSADWR 173
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 229 PALYPRTSHIPLQARSRRRQC-CHPRAIHPTRPHRRSQLDHHTGHCTPHFQHMADER 62
P+L PRT+ I + RRR+ ++P + HR L H P H AD R
Sbjct: 18 PSLLPRTAPIKKTRKHRRRRSGSFTGGVYPRKGHRNRSLLGHA--IPPPNVHSADWR 72
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 229 PALYPRTSHIPLQARSRRRQC-CHPRAIHPTRPHRRSQLDHHTGHCTPHFQHMADER 62
P+L PRT+ I + RRR+ ++P + HR L H P H AD R
Sbjct: 58 PSLLPRTAPIKKTRKHRRRRSGSFTGGVYPRKGHRNRSLLGHA--IPPPNVHSADWR 112
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 229 PALYPRTSHIPLQARSRRRQC-CHPRAIHPTRPHRRSQLDHHTGHCTPHFQHMADER 62
P+L PRT+ I + RRR+ ++P + HR L H P H AD R
Sbjct: 119 PSLLPRTAPIKKTRKHRRRRSGSFTGGVYPRKGHRNRSLLGHA--IPPPNVHSADWR 173
>Z80219-3|CAN86593.1| 221|Caenorhabditis elegans Hypothetical
protein T01H8.5b protein.
Length = 221
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 229 PALYPRTSHIPLQARSRRRQC-CHPRAIHPTRPHRRSQLDHHTGHCTPHFQHMADER 62
P+L PRT+ I + RRR+ ++P + HR L H P H AD R
Sbjct: 119 PSLLPRTAPIKKTRKHRRRRSGSFTGGVYPRKGHRNRSLLGHA--IPPPNVHSADWR 173
>Z68004-3|CAA91983.2| 380|Caenorhabditis elegans Hypothetical
protein F47B10.3 protein.
Length = 380
Score = 27.9 bits (59), Expect = 1.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 254 LATLTNPPAGTVPSNITYPTTGTFPQTPVLP 162
++T++NPP T P+N P P P P
Sbjct: 305 ISTISNPPIVTYPNNSVVPYNPVTPLYPYFP 335
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/54 (27%), Positives = 19/54 (35%)
Frame = -2
Query: 233 PAGTVPSNITYPTTGTFPQTPVLPPTGNSPDTATSXXXXXXXXXXXXPTFPAYG 72
P + PS+ P+T P T V PP P P +P YG
Sbjct: 684 PTSSTPSDTPAPSTSVPPPTSVQPPQPQQPPQGPPGPPGPQQHPGPYPGYPGYG 737
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 64 VRQPYAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVG 201
+ Q G+V G + G + +G +P G TGV G VVG
Sbjct: 796 IPQNNGGDVNTGGTGSGTSNGGPIGDTGTVPTGSGTGV-GQAAVVG 840
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 278 AGPLH-PQLLATLTNPPAGTVPSNITYPTTGTFPQTPVLP 162
AGP+ PQLL + PS+ T + G+ PQ+P +P
Sbjct: 420 AGPIPTPQLLEMIHQEDCSIRPSSPTSVSHGSRPQSPAVP 459
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 278 AGPLH-PQLLATLTNPPAGTVPSNITYPTTGTFPQTPVLP 162
AGP+ PQLL + PS+ T + G+ PQ+P +P
Sbjct: 420 AGPIPTPQLLEMIHQEDCSIRPSSPTSVSHGSRPQSPAVP 459
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 229 PALYPRTSHIPLQARSRRRQC-CHPRAIHPTRPHRRSQLDHHTGHCTPHFQHMADER 62
P+L PRT+ I + RRR+ ++P + HR L H P H AD R
Sbjct: 58 PSLLPRTAPIKKTRKHRRRRSGSFTGGVYPRKGHRNRSLLGHA--IPPPNVHSADWR 112
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 27.9 bits (59), Expect = 1.9
Identities = 22/64 (34%), Positives = 26/64 (40%)
Frame = +1
Query: 82 GNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVANNC 261
G GC CGG G G G LP G + + NVP + + P GG C
Sbjct: 24 GGGGCGGGCGGGCGGG--GGGGCLPTLGCSVISFNVPTL-KLPPPPPPPCGG------GC 74
Query: 262 GCNG 273
GC G
Sbjct: 75 GCGG 78
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 27.9 bits (59), Expect = 1.9
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +1
Query: 79 AGNVGCNAPCGGPAGYGDV---AVSGEL-PVGGNTGVCGNVPVVGYVMFEGTVPAGG 237
AG +G A GG AG G + A G P+GG G G P G +G GG
Sbjct: 126 AGPIGGGAQ-GGYAGAGPIGGGAQGGYAGPIGGGAGYQGGAPAQGAGYQQGPAVGGG 181
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 27.5 bits (58), Expect = 2.5
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +1
Query: 40 GNPGCACNVRQPYAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVP 192
GN G A + AG G P G P G G+ G+ G C + P
Sbjct: 254 GNAGQAGYAQPGPAGPPGDAGPDGAPGNPGQPGAPGDAGAPGSGGGCDHCP 304
>Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical protein
C05D12.2 protein.
Length = 1052
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -1
Query: 210 HHISHY-RHVPADASVATHGQFTRHG 136
H I HY +H+PAD+SV G + G
Sbjct: 942 HRIFHYYQHLPADSSVCQGGNVDKFG 967
>AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen protein
107, isoform a protein.
Length = 256
Score = 27.5 bits (58), Expect = 2.5
Identities = 23/78 (29%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Frame = +1
Query: 49 GCA-CNVRQPYAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTV 225
GC C +P G G + P G P G G G G G G +G
Sbjct: 130 GCIKCPAGEP--GPAGPDGPAGAPGADGQPGAPGNAGQDGAPGAAGEQGDAGAAGQDGEA 187
Query: 226 PAGGLVSVANNCGCNGPA 279
A G N G GPA
Sbjct: 188 GAPG------NAGSEGPA 199
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +1
Query: 82 GNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCG 183
GN G P G P G+ G+ G G+ G
Sbjct: 191 GNAGSEGPAGAPGKDGEAGAPGQDGEAGGEGIPG 224
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +2
Query: 101 PRVVVQLATAMWPCR-VNCPWVATLASAGTC 190
P VV + W C+ C W +TL+ G C
Sbjct: 529 PAPVVDAGSKKWECQSCFCSWDSTLSECGAC 559
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 251 ATLTNPPAGTVPSNITYPTTGTFPQTPVLPPTGN 150
A+ TNP AG+ S+ P + P P PTG+
Sbjct: 153 ASATNPSAGSSASSTPTPYPSSQPTMPTPYPTGS 186
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 82 GNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCG 183
G GC CGG G G G GG G CG
Sbjct: 125 GGGGCGGGCGGGGG-GGCGGGGGGGCGGGGGGCG 157
>Z29443-10|CAA82578.2| 315|Caenorhabditis elegans Hypothetical
protein T07C4.2 protein.
Length = 315
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
Frame = -2
Query: 272 PLHPQLLATLTNPPAGTVPSNITYP------TTGTFPQTPVLPPTG 153
PL P++L T+ PP P + P TG FP P P G
Sbjct: 236 PLMPRILPTMIPPPPAINPLFYSLPYFSHLAATGNFPPVPFQFPFG 281
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = +1
Query: 76 YAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVAN 255
Y GN G + G P G+ +SG G G GN G+ G GG+ +
Sbjct: 276 YPGNGGLSGQPGLPGMKGEKGLSGPAGPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPG 335
Query: 256 NCG 264
G
Sbjct: 336 QKG 338
Score = 25.8 bits (54), Expect = 7.7
Identities = 23/87 (26%), Positives = 30/87 (34%), Gaps = 7/87 (8%)
Frame = +1
Query: 40 GNPGCACNVRQPYAGNVGCNAPCGGPAGYGD-------VAVSGELPVGGNTGVCGNVPVV 198
GNPG + G++G P G P + G+L G G G
Sbjct: 215 GNPGIGSIGPKGDPGDIGAMGPAGPPGPIASTMSKGTIIGPKGDLGEKGEKGEPGEGGQR 274
Query: 199 GYVMFEGTVPAGGLVSVANNCGCNGPA 279
GY G GL + G +GPA
Sbjct: 275 GYPGNGGLSGQPGLPGMKGEKGLSGPA 301
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = +1
Query: 76 YAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVAN 255
Y GN G + G P G+ +SG G G GN G+ G GG+ +
Sbjct: 275 YPGNGGLSGQPGLPGMKGEKGLSGPAGPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPG 334
Query: 256 NCG 264
G
Sbjct: 335 QKG 337
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = +1
Query: 76 YAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVAN 255
Y GN G + G P G+ +SG G G GN G+ G GG+ +
Sbjct: 275 YPGNGGLSGQPGLPGMKGEKGLSGPAGPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPG 334
Query: 256 NCG 264
G
Sbjct: 335 QKG 337
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = +1
Query: 76 YAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVAN 255
Y GN G + G P G+ +SG G G GN G+ G GG+ +
Sbjct: 276 YPGNGGLSGQPGLPGMKGEKGLSGPAGPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPG 335
Query: 256 NCG 264
G
Sbjct: 336 QKG 338
Score = 25.8 bits (54), Expect = 7.7
Identities = 23/87 (26%), Positives = 30/87 (34%), Gaps = 7/87 (8%)
Frame = +1
Query: 40 GNPGCACNVRQPYAGNVGCNAPCGGPAGYGD-------VAVSGELPVGGNTGVCGNVPVV 198
GNPG + G++G P G P + G+L G G G
Sbjct: 215 GNPGIGSIGPKGDPGDIGAMGPAGPPGPIASTMSKGTIIGPKGDLGEKGEKGEPGEGGQR 274
Query: 199 GYVMFEGTVPAGGLVSVANNCGCNGPA 279
GY G GL + G +GPA
Sbjct: 275 GYPGNGGLSGQPGLPGMKGEKGLSGPA 301
>U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protein
174 protein.
Length = 314
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 46 PGCACNVRQPYA--GNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEG 219
P + V+ P G G + P G G G +G GN G G + G + E
Sbjct: 177 PAGSAGVKGPSGNPGAPGTDGPAGNKGGQGPPGNAGAPGANGNPGNAGTPGIPGKTI-EV 235
Query: 220 TVPAG 234
PAG
Sbjct: 236 PAPAG 240
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = +1
Query: 76 YAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVAN 255
Y GN G + G P G+ +SG G G GN G+ G GG+ +
Sbjct: 312 YPGNGGLSGQPGLPGMKGEKGLSGPAGPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPG 371
Query: 256 NCG 264
G
Sbjct: 372 QKG 374
>AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical
protein Y54E5A.4 protein.
Length = 538
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +1
Query: 100 APCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPA-GGL 240
+P GG G + P GG G P G +F T PA GGL
Sbjct: 85 SPSGGLFGAKTATTAAPAPTGGLFGASTAAPATG-SLFGSTAPATGGL 131
>AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen protein
107, isoform b protein.
Length = 294
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +1
Query: 82 GNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCG 183
GN G P G P G+ G+ G G+ G
Sbjct: 229 GNAGSEGPAGAPGKDGEAGAPGQDGEAGGEGIPG 262
>AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical
protein R05G9R.1 protein.
Length = 789
Score = 26.6 bits (56), Expect = 4.4
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 248 TLTNPPAGTVPS-NITYPTTGTFPQTPVLPPT 156
T T PP+ T+P ITYPTT + V PP+
Sbjct: 385 TETPPPSSTLPPPTITYPTT-YLSTSSVRPPS 415
>AB121091-1|BAD14918.1| 315|Caenorhabditis elegans T-box
transcription factor TBX-8 protein.
Length = 315
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
Frame = -2
Query: 272 PLHPQLLATLTNPPAGTVPSNITYP------TTGTFPQTPVLPPTG 153
PL P++L T+ PP P + P TG FP P P G
Sbjct: 236 PLMPRILPTMIPPPPAINPLFYSLPYFSHLAATGNFPPVPFQFPFG 281
>Z81547-1|CAB04459.1| 354|Caenorhabditis elegans Hypothetical
protein F53F8.1 protein.
Length = 354
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 291 EKLIRRTVASAVVGHAHQSSSRHCTLEHHISHY 193
E++ V S+ G+ HQS ++ +HH HY
Sbjct: 54 EEMYSSIVPSSSNGYYHQSQYQNAHHQHHQQHY 86
>Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical
protein T23D8.1 protein.
Length = 568
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +3
Query: 66 SSAICWKCGVQCPVWWSSWL-RRCGRV 143
++AI W V P W WL RC R+
Sbjct: 462 NAAIMWYQAVNMPAWLEGWLHHRCVRL 488
>Z68009-4|CAA92006.1| 152|Caenorhabditis elegans Hypothetical
protein R09A8.4 protein.
Length = 152
Score = 26.2 bits (55), Expect = 5.8
Identities = 19/65 (29%), Positives = 23/65 (35%)
Frame = +1
Query: 82 GNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVANNC 261
G +G G GD+ + GE G G G V G G GLV
Sbjct: 34 GEIGREGSPGAQGAPGDMGMMGEAGKEGEKGAPGREGVRGEKGPSGPPGLPGLVGPKGFS 93
Query: 262 GCNGP 276
G +GP
Sbjct: 94 GNSGP 98
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 26.2 bits (55), Expect = 5.8
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 40 GNPGCACNVRQP-YAGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCG 183
G PG QP + G G P G GD G++ GN G G
Sbjct: 147 GAPGPQGPNGQPGHPGQGGSQGPAGPRGPAGDAGAPGQVGAPGNPGQAG 195
>Z29561-5|CAA82668.1| 395|Caenorhabditis elegans Hypothetical
protein R10E12.2 protein.
Length = 395
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 267 ASAVVGHAHQSSSRHCTLEHHISHYRHVPADASVATHGQFTRHGH 133
AS++ G + H HH H + A S H +TR G+
Sbjct: 302 ASSLHGSGGSHQNPHMYNSHHHQHQQQQNAHPSEMYHSTYTRDGY 346
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 224 TVPSNITYPTTGTFPQTPV-LPPTGNSP 144
T S ++ PTT T P TP +P T N+P
Sbjct: 473 TTVSTMSPPTTVTVPTTPTPVPTTTNTP 500
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -1
Query: 243 HQSSSRHCTLEHHISHYRHVPADASVATHGQFTRHGHIA 127
HQ H HH H H P A+H Q +HG A
Sbjct: 772 HQQMPHHQPHLHHAHHPVH-PHRGPRASHSQHLQHGQYA 809
>U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical
protein F40H6.2 protein.
Length = 997
Score = 26.2 bits (55), Expect = 5.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 224 TVPSNITYPTTGTFPQTPVLPP 159
T+P T P+ T P TP PP
Sbjct: 613 TIPEEPTKPSQSTSPSTPSTPP 634
>AF067213-2|AAC16999.1| 225|Caenorhabditis elegans Hypothetical
protein T25B2.1 protein.
Length = 225
Score = 26.2 bits (55), Expect = 5.8
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 157 VGGNTGVCGNVPVVGYVMFEGTVPAGGLVSVANNCG-CNGPAY*F 288
+GG T VC VG + G +P G AN C C P Y F
Sbjct: 8 LGGVTDVCATAAEVGIMYTLGLIP-GYSYGDANTCSICVEPFYGF 51
>AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen protein
54 protein.
Length = 281
Score = 26.2 bits (55), Expect = 5.8
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Frame = +1
Query: 40 GNPGCACNVRQPYA----GNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGN 186
G PG QP A GN G G GD +GE+ V G G GN
Sbjct: 144 GAPGAPGPDGQPGAPGSNGNPGSAGEQGSEGEPGDAGATGEIGVAGAPGKNGN 196
>AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein.
Length = 568
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +3
Query: 66 SSAICWKCGVQCPVWWSSWL-RRCGRV 143
++AI W V P W WL RC R+
Sbjct: 462 NAAIMWYQAVNMPAWLEGWLHHRCVRL 488
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 79 AGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGN 186
AGN G + G P G G GN G GN
Sbjct: 121 AGNPGADGDAGSPGEAGGAGPPGPPGPDGNPGAPGN 156
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 25.8 bits (54), Expect = 7.7
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Frame = +1
Query: 40 GNPGCACNVRQPYAGNVGCNAPCG-----GPAGYGDVAVSGELPVGGNTGVCG 183
G PG N Y G VG P G GPAG+ + G G G G
Sbjct: 204 GAPGQPGNDAHGYGGGVGAPGPAGPRGAPGPAGHPGSSGGGRPGPAGPKGAPG 256
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2
Query: 248 TLTNPPAGTVPSNITYPTTGTFPQTPVLPPTGNSPDTAT 132
T T P T P+ T TT T P T T + T T
Sbjct: 237 TTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTT 275
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 79 AGNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGN 186
AGN G + G P G G GN G GN
Sbjct: 121 AGNPGADGDAGSPGEAGGAGPPGPPGPDGNPGAPGN 156
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -2
Query: 248 TLTNPPAGTVPSNITYPTTGTFPQTPVLPPTGNSPDTATS 129
T+T TV S T P+T T T SP T T+
Sbjct: 537 TVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTTT 576
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -2
Query: 248 TLTNPPAGTVPSNITYPTTGTFPQTPVLPPTGNSPDTATS 129
T+T TV S T P+T T T SP T T+
Sbjct: 378 TVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTTT 417
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -2
Query: 248 TLTNPPAGTVPSNITYPTTGTFPQTPVLPPTGNSPDTATS 129
T+T TV S T P+T T T SP T T+
Sbjct: 418 TVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTTT 457
>U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protein
171 protein.
Length = 307
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +1
Query: 82 GNVGCNAPCGGPAGYGDVAVSGELPVGGNTGVCGNVPVVG 201
GN G + G P G G +GG G GN V G
Sbjct: 181 GNPGFDGQPGAPGNNGFAGGPGAPGLGGKDGQSGNAGVPG 220
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -2
Query: 248 TLTNPPAGTVPSNITYPTTGTFPQT-PVLPPTGNSPDTATS 129
T T P T + +TY T T T P PT T T+
Sbjct: 298 TTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEPEPTTTA 338
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -2
Query: 248 TLTNPPAGTVPSNITYPTTGTFPQT-PVLPPTGNSPDTATS 129
T T P T + +TY T T T P PT T T+
Sbjct: 280 TTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEPEPTTTA 320
>AL032637-9|CAA21621.1| 108|Caenorhabditis elegans Hypothetical
protein Y43F8C.9 protein.
Length = 108
Score = 25.8 bits (54), Expect = 7.7
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -2
Query: 242 TNPPAGTVPSNITYPTTGTFPQTPVLPPT-----GNSPDTATS 129
T+PP T + T TT T P PPT SP++A+S
Sbjct: 46 TDPPTTTTTTTTTTTTTTTTTPPPPPPPTIQKSAAVSPESASS 88
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 242 TNPPAGTVPSNITYPTTGTFPQTPVLPPTGNSPDTATS 129
++PP T P+ PTT PQ P SP +T+
Sbjct: 217 SSPPTTTTPTTTLKPTTS--PQKPDSTEEATSPSQSTT 252
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,717,437
Number of Sequences: 27780
Number of extensions: 208469
Number of successful extensions: 1110
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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