Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6m15
(625 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1583 - 27898375-27898436,27898455-27898539,27898621-278987... 31 0.56
06_01_0116 - 907995-908813,909002-909286 29 4.0
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 29 4.0
03_01_0094 + 749906-750204,751238-751357,751452-751521,751701-75... 29 4.0
07_03_0714 + 20885468-20885473,20885625-20885715,20886469-208865... 28 5.2
06_03_1454 - 30261240-30261470,30261896-30262615,30262700-302628... 28 5.2
05_01_0312 + 2460434-2460892 28 5.2
04_04_1107 - 30954647-30954769,30955052-30955141,30955309-309556... 28 5.2
03_02_0634 + 9986742-9987512 28 5.2
02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916 28 5.2
10_08_0640 + 19512591-19512856,19513428-19513550,19513660-195137... 28 6.9
10_02_0074 - 4965688-4966638,4966877-4966906,4968656-4968927,496... 28 6.9
07_03_0363 + 17225472-17226778,17226910-17226917,17227313-172274... 28 6.9
05_03_0291 - 11791116-11791724 28 6.9
03_02_0565 - 9484045-9484335,9484621-9484686,9484790-9484867,948... 28 6.9
02_01_0271 - 1799939-1800676 28 6.9
10_02_0175 - 6207485-6207898 27 9.2
06_03_0355 + 19822110-19824491 27 9.2
03_06_0415 - 33775143-33775305,33775438-33775565,33775654-337757... 27 9.2
>07_03_1583 -
27898375-27898436,27898455-27898539,27898621-27898768,
27899009-27899028,27899135-27899236,27899743-27899812,
27899956-27900012,27902324-27902484,27902742-27902761,
27902997-27903069,27903077-27903169,27903456-27903496,
27903597-27903858
Length = 397
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +3
Query: 444 FPPRRVAVRQRLREATEGVPPQ*RYAHICQGTMGGVAXIGGSQLDGGANGRMVIRIRGSF 623
F PR A R+R R + P + A + GG+ G ++ G NG +V I SF
Sbjct: 197 FSPRE-ARRERERVTLDNAPKRWESAALFSLAFGGLCYFGSQRVIGAVNGFLVFSILASF 255
>06_01_0116 - 907995-908813,909002-909286
Length = 367
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -1
Query: 406 HHRAAGAKV*W---PPIRHGLVGTTHHSDTPPVIS 311
HHRA GA + PP+ L+ HH PPV++
Sbjct: 34 HHRAGGAASGYGSRPPLASLLLSRHHHHHQPPVLA 68
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 328 CQNDASCLQDHAGLEAITLLHRQLDDDANGNVDLSES 438
C N S + D AG++ + LDDD G + L+ S
Sbjct: 361 CCNQVSAVTDQAGVQVSGVTTGDLDDDEGGGLALNAS 397
>03_01_0094 +
749906-750204,751238-751357,751452-751521,751701-751811,
752036-752119,752720-752770,752934-752963,753064-753126,
753234-753299,753400-753516,753956-753991,754387-754506,
754644-754814,754983-755076,755394-755503
Length = 513
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 211 ERTEKDGGRREKWGPVVRSGSFVTDPAFTASNDQILLEACQNDA 342
ER +D W V++ + DP ++S D +L EAC+ A
Sbjct: 146 ERNPEDPDAYYNWALVLQESADNVDPDSSSSKDSLLEEACKKYA 189
>07_03_0714 +
20885468-20885473,20885625-20885715,20886469-20886537,
20887142-20887251,20887694-20887786
Length = 122
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +1
Query: 454 EELQYDSGYEKRQRAFHHNDDMHISVKELWE 546
E+L+ D+GY+ R A ++ D +++K+ W+
Sbjct: 11 EDLEKDTGYKLRVLAQNYPDTPGLAIKDFWQ 41
>06_03_1454 -
30261240-30261470,30261896-30262615,30262700-30262843,
30262953-30263204,30263542-30263751
Length = 518
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 400 DDDANGNVDLSESDDFLREELQYDSGYEKRQRAFHHNDDM 519
DDD + + D + +D L + D YE++ A H+ D+
Sbjct: 479 DDDDDDDDDDDDEEDGLSVSINEDMSYEEKDAASDHDSDV 518
>05_01_0312 + 2460434-2460892
Length = 152
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +1
Query: 187 HLCKADDAERTEKDGGRREKWGP---VVRSGSFVTDPAFT 297
H K +AER + G WGP VVRS +FVT T
Sbjct: 70 HKVKLGEAERVTEVSGTLGPWGPHACVVRSLAFVTSAGKT 109
>04_04_1107 -
30954647-30954769,30955052-30955141,30955309-30955617,
30955732-30955842,30955945-30956379,30956452-30956610,
30957044-30957994,30959016-30959483
Length = 881
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 367 LEAITLLHRQLDDDANGNVDLSESDDFLREELQYDSGYEKRQRAFHHNDD 516
++ +TL H A G+V +S + Q+ E+RQ A HH+DD
Sbjct: 815 IDLVTLQHAPGSSAAGGDVQQDQSKHQDESDKQH---VERRQSARHHDDD 861
>03_02_0634 + 9986742-9987512
Length = 256
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 143 RCVS-VSFCIGAYLFFICVKLTMPRGQKKMVEGGRSGVQWS 262
RCVS V +C+ + F + L +PRG + G V WS
Sbjct: 177 RCVSLVGYCMLPMVIFSAISLFLPRGGGLIFGVGMGFVLWS 217
>02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916
Length = 722
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +1
Query: 403 DDANGNVDLSESDDFLREELQYDSGYE--KRQRAFHHNDDMHISVKE 537
D N N L E L + D+ Y K +A+ ND +H+ VKE
Sbjct: 571 DMENRNAQLEEKVRELEALMDKDNNYRGGKDTKAYKENDGLHLHVKE 617
>10_08_0640 +
19512591-19512856,19513428-19513550,19513660-19513729,
19513846-19513956,19514224-19514307,19515205-19515255,
19515844-19515873,19516002-19516064,19516164-19516229,
19516369-19516485,19516579-19516614,19516938-19517057,
19517188-19517358,19517578-19517688
Length = 472
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 211 ERTEKDGGRREKWGPVVRSGSFVTDPAFTASNDQILLEACQNDA 342
ER D W V++ + DP ++S D +L EAC+ A
Sbjct: 136 ERNHDDPDAYYNWALVLQESADNVDPNSSSSKDALLEEACKKYA 179
>10_02_0074 -
4965688-4966638,4966877-4966906,4968656-4968927,
4969092-4969329
Length = 496
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 319 LEACQNDASCLQDHAGL-EAITLLHRQLDDDANGNVDLSESDDFLREELQYDSGYE 483
L+ C +D + D+AG+ LL LDDD + L EL+Y +GY+
Sbjct: 340 LDQC-HDTNFAWDNAGIYPGNNLLDGNLDDDTQDQFGNQSTLGALTGELEYGTGYQ 394
>07_03_0363 +
17225472-17226778,17226910-17226917,17227313-17227488,
17227822-17227882,17227955-17228053,17228155-17228249,
17228411-17228482,17228668-17228735,17228934-17229390,
17229486-17229596
Length = 817
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 493 SVASRSRCRTATLRGGNHRSRSSPRFRWRHHRAAGAK 383
++ S R R A RGG+ S+ PRFR R G++
Sbjct: 402 ALGSVQRKRMARSRGGSQASQREPRFRSRMRDGEGSQ 438
>05_03_0291 - 11791116-11791724
Length = 202
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 542 GRRGLXRRFTIGRWSKRSNGYQNPWIL 622
G RG RR + GRW +R+NG W++
Sbjct: 127 GGRGRWRRRS-GRWRRRTNGVGGEWMV 152
>03_02_0565 -
9484045-9484335,9484621-9484686,9484790-9484867,
9485005-9485157,9485271-9485356,9485445-9485551,
9485685-9485752,9485890-9485912,9487627-9487732,
9487772-9487899,9487989-9488065,9488126-9488131,
9488206-9488264
Length = 415
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/77 (27%), Positives = 31/77 (40%)
Frame = -3
Query: 419 FPLASSSSCRCKSVMASNPAWSCRHDASF*HASSNI*SFEAVKAGSVTKEPLRTTGPHFS 240
+P SSSS + + + SC H SF A + + + G T LR G +
Sbjct: 325 YPGTSSSSASSQQQVVFSVLESCSHVMSFFTAIATVLWLQDAGGGGGTATELRRRGLCVA 384
Query: 239 RLPPSFSVLSASSALHR 189
L P+ L+A R
Sbjct: 385 ALSPAVVSLAAEGGRRR 401
>02_01_0271 - 1799939-1800676
Length = 245
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -1
Query: 505 GGTPSVASRS-RCRTATLRGGNHRSRSSPRFRWRHHRAA 392
GG S +SR R R GG RS +F + HH AA
Sbjct: 121 GGESSSSSRRWRLRDLVGAGGRSRSDGKDKFAFLHHHAA 159
>10_02_0175 - 6207485-6207898
Length = 137
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -1
Query: 514 RH-CGGTPSVASRSRCRTATLRGGNHRSRSSPRFRWRHHRAAGAK 383
RH CGG R R AT R +R RWR R G +
Sbjct: 31 RHGCGGGRKRRRRRRAEAATARWRAAAARRGEWRRWRQRRRGGGR 75
>06_03_0355 + 19822110-19824491
Length = 793
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 424 DLSESDDFLREELQYDSGYEKRQRAFH 504
+L++ DD +R E+ YD G+ + + H
Sbjct: 344 NLNKGDDEIRNEVSYDDGFSGKMGSLH 370
>03_06_0415 -
33775143-33775305,33775438-33775565,33775654-33775761,
33775809-33775909,33776265-33776805,33777290-33777847
Length = 532
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 406 DANGNVDLSESDDFLREELQYDSGYEKRQRAFHHND 513
D + L +SDDF+ EE + D ++ A H+D
Sbjct: 293 DGRKKLKLVDSDDFIEEEPEMDEPKKRLSEADSHSD 328
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,038,926
Number of Sequences: 37544
Number of extensions: 393162
Number of successful extensions: 1267
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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