Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6m15
         (625 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse t...    27   0.64 
AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    25   1.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   2.6  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   6.0  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   7.9  

>AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 469 RTATLRGGNHRSRSSPRFRWR 407
           RT ++R G H SRS P F WR
Sbjct: 108 RTYSVRMGPHLSRSIPCFFWR 128


>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = -1

Query: 340 HHSDTPPVISDHXXXXXXXXXXKNHFGPLDPTSPAFHHLFLSSRHRQLYTDEE 182
           H+   P + + H            +F P  P   A  H+    RHR ++T+E+
Sbjct: 146 HNYLQPDLFAAHLHQQVGLVACNGNFRPRYPFLNADSHIKRKRRHRTIFTEEQ 198


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 394  QLDDDANGNVDLSESDDFLREELQY 468
            Q+DDD + N     SDD  REE+QY
Sbjct: 1206 QVDDDFDDNY----SDDDAREEMQY 1226


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 484  SRSRCRTATLRGGNHRSRS 428
            SRSR R+ + +G   RSRS
Sbjct: 1103 SRSRSRSGSAKGSRSRSRS 1121


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 211 ERTEKDGGRREKW 249
           E+ E+DG R EKW
Sbjct: 913 EKLEEDGKRMEKW 925


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,390
Number of Sequences: 2352
Number of extensions: 14357
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)