Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6m15
(625 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ812088-1|ABG89384.1| 530|Caenorhabditis elegans mammalian str... 83 1e-16
AC024823-3|AAP40515.1| 395|Caenorhabditis elegans Hypothetical ... 83 1e-16
AC024823-2|AAF59596.3| 530|Caenorhabditis elegans Hypothetical ... 83 1e-16
AC024823-1|AAL32257.1| 510|Caenorhabditis elegans Hypothetical ... 83 1e-16
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z48009-10|CAA88082.1| 331|Caenorhabditis elegans Hypothetical p... 29 3.6
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 28 4.7
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 28 4.7
Z66524-8|CAH10782.1| 753|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z66523-10|CAH04723.1| 753|Caenorhabditis elegans Hypothetical p... 27 8.2
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 27 8.2
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 27 8.2
AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical... 27 8.2
AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical ... 27 8.2
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 27 8.2
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 27 8.2
>DQ812088-1|ABG89384.1| 530|Caenorhabditis elegans mammalian
stromal interaction molecule-1 protein.
Length = 530
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/90 (41%), Positives = 54/90 (60%)
Frame = +1
Query: 349 LQDHAGLEAITLLHRQLDDDANGNVDLSESDDFLREELQYDSGYEKRQRAFHHNDDMHIS 528
++D G EAI +HR +DDD +G++D +ES F++E++Q R+ H DD I+
Sbjct: 38 IRDKLGYEAIRDIHRDMDDDHSGSIDRNESTGFMKEDMQMRGSERTRRENKFHGDDDAIT 97
Query: 529 VKELWEAWLXSEVHNWTVEQTVEWLSESVD 618
V +LWEAW S WT E+ VEWL V+
Sbjct: 98 VDDLWEAWFESIERTWTNERLVEWLINDVN 127
>AC024823-3|AAP40515.1| 395|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1c protein.
Length = 395
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/90 (41%), Positives = 54/90 (60%)
Frame = +1
Query: 349 LQDHAGLEAITLLHRQLDDDANGNVDLSESDDFLREELQYDSGYEKRQRAFHHNDDMHIS 528
++D G EAI +HR +DDD +G++D +ES F++E++Q R+ H DD I+
Sbjct: 38 IRDKLGYEAIRDIHRDMDDDHSGSIDRNESTGFMKEDMQMRGSERTRRENKFHGDDDAIT 97
Query: 529 VKELWEAWLXSEVHNWTVEQTVEWLSESVD 618
V +LWEAW S WT E+ VEWL V+
Sbjct: 98 VDDLWEAWFESIERTWTNERLVEWLINDVN 127
>AC024823-2|AAF59596.3| 530|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1a protein.
Length = 530
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/90 (41%), Positives = 54/90 (60%)
Frame = +1
Query: 349 LQDHAGLEAITLLHRQLDDDANGNVDLSESDDFLREELQYDSGYEKRQRAFHHNDDMHIS 528
++D G EAI +HR +DDD +G++D +ES F++E++Q R+ H DD I+
Sbjct: 38 IRDKLGYEAIRDIHRDMDDDHSGSIDRNESTGFMKEDMQMRGSERTRRENKFHGDDDAIT 97
Query: 529 VKELWEAWLXSEVHNWTVEQTVEWLSESVD 618
V +LWEAW S WT E+ VEWL V+
Sbjct: 98 VDDLWEAWFESIERTWTNERLVEWLINDVN 127
>AC024823-1|AAL32257.1| 510|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1b protein.
Length = 510
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/90 (41%), Positives = 54/90 (60%)
Frame = +1
Query: 349 LQDHAGLEAITLLHRQLDDDANGNVDLSESDDFLREELQYDSGYEKRQRAFHHNDDMHIS 528
++D G EAI +HR +DDD +G++D +ES F++E++Q R+ H DD I+
Sbjct: 38 IRDKLGYEAIRDIHRDMDDDHSGSIDRNESTGFMKEDMQMRGSERTRRENKFHGDDDAIT 97
Query: 529 VKELWEAWLXSEVHNWTVEQTVEWLSESVD 618
V +LWEAW S WT E+ VEWL V+
Sbjct: 98 VDDLWEAWFESIERTWTNERLVEWLINDVN 127
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical protein
C06E1.10 protein.
Length = 1148
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 538 LWEAWLXSEVHNWTVEQTVEWLSESV 615
L E WL +E NW +E+ +EW+ ESV
Sbjct: 1099 LKEQWLKNE--NWLLEEYLEWVPESV 1122
>Z48009-10|CAA88082.1| 331|Caenorhabditis elegans Hypothetical
protein AH6.14 protein.
Length = 331
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 119 CISVIESSRCVSVSFCIGAYLFFICVKLT 205
C S+IE R S +F I Y+ +C+ +T
Sbjct: 6 CASIIEQQRLRSSNFVIAQYIDLLCIVIT 34
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +1
Query: 226 DGGRREKWGPVVRSGSFVTD----PAFTASNDQILLEACQNDASCL 351
DG R + ++ +G FVTD P+FT +D LL + +CL
Sbjct: 146 DGNHRHEIDHILANGKFVTDTTVLPSFTNGSDHRLLRCNLHFNNCL 191
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +1
Query: 226 DGGRREKWGPVVRSGSFVTD----PAFTASNDQILLEACQNDASCL 351
DG R + ++ +G FVTD P+FT +D LL + +CL
Sbjct: 317 DGNHRHEIDHILANGKFVTDTTVLPSFTNGSDHRLLRCNLHFNNCL 362
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +1
Query: 226 DGGRREKWGPVVRSGSFVTD----PAFTASNDQILLEACQNDASCL 351
DG R + ++ +G FVTD P+FT +D LL + +CL
Sbjct: 56 DGNHRHEIDHILANGKFVTDTTVLPSFTNGSDHRLLRCNLHFNNCL 101
>Z66524-8|CAH10782.1| 753|Caenorhabditis elegans Hypothetical
protein T13H5.1b protein.
Length = 753
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +1
Query: 454 EELQYDSGYEKRQRAFHHNDDMHISVKELWEAWLXSEVHNWTVEQTVEWLSESVD 618
EE+Q +K+ RA +HIS+ W+ +H T ++ + +V+
Sbjct: 26 EEIQLKESKKKKNRASRCLLRIHISILNSLSKWIDRNIHERTASRSTQNFVNTVE 80
>Z66523-10|CAH04723.1| 753|Caenorhabditis elegans Hypothetical
protein T13H5.1b protein.
Length = 753
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +1
Query: 454 EELQYDSGYEKRQRAFHHNDDMHISVKELWEAWLXSEVHNWTVEQTVEWLSESVD 618
EE+Q +K+ RA +HIS+ W+ +H T ++ + +V+
Sbjct: 26 EEIQLKESKKKKNRASRCLLRIHISILNSLSKWIDRNIHERTASRSTQNFVNTVE 80
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -1
Query: 487 ASRSRCRTATLRGGNHRSRSSPRFRWRHHR 398
A RSR R+ RGG RSRS R R R
Sbjct: 30 ARRSRSRSRDRRGGRSRSRSPSRRRTSRDR 59
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -1
Query: 487 ASRSRCRTATLRGGNHRSRSSPRFRWRHHR 398
A RSR R+ RGG RSRS R R R
Sbjct: 58 ARRSRSRSRDRRGGRSRSRSPSRRRTSRDR 87
>AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical
protein T08B2.5d protein.
Length = 163
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -1
Query: 487 ASRSRCRTATLRGGNHRSRSSPRFRWRHHR 398
A RSR R+ RGG RSRS R R R
Sbjct: 116 ARRSRSRSRDRRGGRSRSRSPSRRRTSRDR 145
>AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical
protein T08B2.5e protein.
Length = 184
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -1
Query: 487 ASRSRCRTATLRGGNHRSRSSPRFRWRHHR 398
A RSR R+ RGG RSRS R R R
Sbjct: 137 ARRSRSRSRDRRGGRSRSRSPSRRRTSRDR 166
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -1
Query: 487 ASRSRCRTATLRGGNHRSRSSPRFRWRHHR 398
A RSR R+ RGG RSRS R R R
Sbjct: 116 ARRSRSRSRDRRGGRSRSRSPSRRRTSRDR 145
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -1
Query: 487 ASRSRCRTATLRGGNHRSRSSPRFRWRHHR 398
A RSR R+ RGG RSRS R R R
Sbjct: 117 ARRSRSRSRDRRGGRSRSRSPSRRRTSRDR 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,055,465
Number of Sequences: 27780
Number of extensions: 319124
Number of successful extensions: 895
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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