Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6m15
(625 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 24 1.4
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 3.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 4.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 4.2
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 5.6
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 7.4
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 9.8
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 9.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 9.8
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 9.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.8
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 21 9.8
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/58 (20%), Positives = 28/58 (48%)
Frame = +1
Query: 451 REELQYDSGYEKRQRAFHHNDDMHISVKELWEAWLXSEVHNWTVEQTVEWLSESVDPS 624
R++ + Y+++ + N D+ +K + + WL + + ++ V L ES + S
Sbjct: 186 RKQFYFHQFYKQQPDLNYRNSDVREEMKNIMKFWLDKGIDGFRID-AVPHLFESANIS 242
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.6 bits (46), Expect = 3.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 417 SVGVIIELPVQKCDGLQSGMVL 352
SVG+ +E+P +C SG +L
Sbjct: 127 SVGIDLEMPSVECIVFNSGTIL 148
Score = 21.8 bits (44), Expect = 5.6
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +1
Query: 499 FHHNDDMHISVKELWE 546
+ H D H+ +K +WE
Sbjct: 76 YSHTVDFHVMLKLMWE 91
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 4.2
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 83 LFSRYPIVKCG*CISVIESSRCVSVSFCIGAYLFFICVKLTMPRGQKKMVEGGR 244
L + I + G + + S VS FC+ +FF C+ ++ G + +G R
Sbjct: 428 LIGLFCITEGGMYVFQLLDSYAVS-GFCLLFLMFFECIAISWAFGVNRFYDGIR 480
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 4.2
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 83 LFSRYPIVKCG*CISVIESSRCVSVSFCIGAYLFFICVKLTMPRGQKKMVEGGR 244
L + I + G + + S VS FC+ +FF C+ ++ G + +G R
Sbjct: 481 LIGLFCITEGGMYVFQLLDSYAVS-GFCLLFLMFFECIAISWAFGVNRFYDGIR 533
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -2
Query: 237 PSTIFFCPLGIVSFTQMKNKYAPIQNETDTH 145
PS F PL ++ T ++ ++ I + D H
Sbjct: 878 PSVRPFAPLLLLHLTPLQPRFYSISSSPDVH 908
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -3
Query: 353 CRHDASF*HASSNI*SFEAVKAGSVTKEPLRTTGP 249
CR DA S++ F + + EP R GP
Sbjct: 26 CRRDAEIQELRSHLDKFLQCASLKLAFEPRRNPGP 60
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +1
Query: 511 DDMHISVKELWEAWLXSEVHNWTVEQ 588
D++H++ +L E W+ S +T Q
Sbjct: 183 DELHLTEYKLVEKWVNSSEIFYTTSQ 208
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -2
Query: 261 DHWTPLLP 238
+HW PLLP
Sbjct: 500 EHWMPLLP 507
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 103 NRIPRKQYTHPKILKFNNTV 44
NR R++ PKI+ NN++
Sbjct: 69 NRTERERSKEPKIISNNNSL 88
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 103 NRIPRKQYTHPKILKFNNTV 44
NR R++ PKI+ NN++
Sbjct: 69 NRTERERSKEPKIISNNNSL 88
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 103 NRIPRKQYTHPKILKFNNTV 44
NR R++ PKI+ NN++
Sbjct: 69 NRTERERSKEPKIISNNNSL 88
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 103 NRIPRKQYTHPKILKFNNTV 44
NR R++ PKI+ NN++
Sbjct: 69 NRTERERSKEPKIISNNNSL 88
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 103 NRIPRKQYTHPKILKFNNTV 44
NR R++ PKI+ NN++
Sbjct: 69 NRTERERSKEPKIISNNNSL 88
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 103 NRIPRKQYTHPKILKFNNTV 44
NR R++ PKI+ NN++
Sbjct: 69 NRTERERSKEPKIISNNNSL 88
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 103 NRIPRKQYTHPKILKFNNTV 44
NR R++ PKI+ NN++
Sbjct: 69 NRTERERSKEPKIISNNNSL 88
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 103 NRIPRKQYTHPKILKFNNTV 44
NR R++ PKI+ NN++
Sbjct: 69 NRTERERSKEPKIISNNNSL 88
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 103 NRIPRKQYTHPKILKFNNTV 44
NR R++ PKI+ NN++
Sbjct: 69 NRTERERSKEPKIISNNNSL 88
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 103 NRIPRKQYTHPKILKFNNTV 44
NR R++ PKI+ NN++
Sbjct: 302 NRTERERSKEPKIISNNNSL 321
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 103 NRIPRKQYTHPKILKFNNTV 44
NR R++ PKI+ NN++
Sbjct: 302 NRTERERSKEPKIISNNNSL 321
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/37 (18%), Positives = 17/37 (45%)
Frame = +1
Query: 502 HHNDDMHISVKELWEAWLXSEVHNWTVEQTVEWLSES 612
HH H ++ +E W+ W+ ++ + + +S
Sbjct: 156 HHGMAYHRGHRKDYERWVQQGAFGWSWDEVMPYYLKS 192
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,385
Number of Sequences: 438
Number of extensions: 3836
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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