Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6m09
         (178 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    19   3.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    19   4.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    19   4.7  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    19   6.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    18   8.1  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    18   8.1  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 160 ISFLLNHIHFVHINILY 110
           + +  N+IHF +  +LY
Sbjct: 152 VEYFQNYIHFFYQLLLY 168


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 84  VFFKYLTLHFWVRLEN 37
           ++FK+L+   W R  N
Sbjct: 583 IYFKWLSFLSWFRYGN 598


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 84  VFFKYLTLHFWVRLEN 37
           ++FK+L+   W R  N
Sbjct: 583 IYFKWLSFLSWFRYGN 598


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 15  VSFWKNNNFLILPKNVMLNI 74
           VSFW N N    P  V L +
Sbjct: 87  VSFWLNRN--ATPARVALGV 104


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +3

Query: 87  YTYFPFRE 110
           YTY PF E
Sbjct: 425 YTYLPFGE 432


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 18  SFWKNNNFLILPKNVM 65
           SFW    FL+L  +V+
Sbjct: 137 SFWAVTIFLVLAASVI 152


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,285
Number of Sequences: 336
Number of extensions: 875
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 38
effective length of database: 109,817
effective search space used:  2196340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)