Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6m01
         (692 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003271-1|AAO25028.1|  489|Drosophila melanogaster LD17340p pro...    49   7e-06
AE014134-1094|AAS64645.1|  489|Drosophila melanogaster CG9526-PB...    49   7e-06
AE014134-1093|AAF52384.1|  489|Drosophila melanogaster CG9526-PA...    49   7e-06

>BT003271-1|AAO25028.1|  489|Drosophila melanogaster LD17340p
           protein.
          Length = 489

 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 13/214 (6%)
 Frame = +2

Query: 77  DIVYYSSLLVCISLGRNYRKISDIEMKRNYXXXXXXXXXXXXXXRYLYHAIIMVWGNIVI 256
           D++Y   LL CI  G   +KI+D   ++                 +  H  + +      
Sbjct: 5   DVIYVICLLGCIGAGSYVKKIADEGQRKLVSTGLGVLVVVIVSGLHSLHCFVSLALGTAA 64

Query: 257 IKCCERRYVHQMSLGFTWLDLLYIHCNVDDAVYAI-----WVHQTIALRLVGLAFELNSA 421
           +        H ++    +  L++    + D  + I      +   + L++ G+AFE  +A
Sbjct: 65  VLLVHPSKGHLVTFAVMFGYLVFFR--IFDFYFGIPGHTNMIQMILTLKVSGIAFEKTAA 122

Query: 422 --------DMTKLEQKPGPSSVKINIADVDSIHVEPYAVDIIAYAFFFVGLHKDSYYRWA 577
                   +  K +Q+       I I D D       A +I+ Y+F ++G+    YYR+ 
Sbjct: 123 WKRLQAHDEQKKNDQRDVHQESPIEITDYDVELQSLSAAEILHYSFNYIGVLTGPYYRYR 182

Query: 578 VFNDHFRNSLSSIGDCRTLTEQKLKKAFLSCIAY 679
            + D+F     +       T +KLK A   C  Y
Sbjct: 183 TYRDYFEMPFKTYAPTVEATLEKLKYAVFYCALY 216


>AE014134-1094|AAS64645.1|  489|Drosophila melanogaster CG9526-PB,
           isoform B protein.
          Length = 489

 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 13/214 (6%)
 Frame = +2

Query: 77  DIVYYSSLLVCISLGRNYRKISDIEMKRNYXXXXXXXXXXXXXXRYLYHAIIMVWGNIVI 256
           D++Y   LL CI  G   +KI+D   ++                 +  H  + +      
Sbjct: 5   DVIYVICLLGCIGAGSYVKKIADEGQRKLVSTGLGVLVVVIVSGLHSLHCFVSLALGTAA 64

Query: 257 IKCCERRYVHQMSLGFTWLDLLYIHCNVDDAVYAI-----WVHQTIALRLVGLAFELNSA 421
           +        H ++    +  L++    + D  + I      +   + L++ G+AFE  +A
Sbjct: 65  VLLVHPSKGHLVTFAVMFGYLVFFR--IFDFYFGIPGHTNMIQMILTLKVSGIAFEKTAA 122

Query: 422 --------DMTKLEQKPGPSSVKINIADVDSIHVEPYAVDIIAYAFFFVGLHKDSYYRWA 577
                   +  K +Q+       I I D D       A +I+ Y+F ++G+    YYR+ 
Sbjct: 123 WKRLQAHDEQKKNDQRDVHQESPIEITDYDVELQSLSAAEILHYSFNYIGVLTGPYYRYR 182

Query: 578 VFNDHFRNSLSSIGDCRTLTEQKLKKAFLSCIAY 679
            + D+F     +       T +KLK A   C  Y
Sbjct: 183 TYRDYFEMPFKTYAPTVEATLEKLKYAVFYCALY 216


>AE014134-1093|AAF52384.1|  489|Drosophila melanogaster CG9526-PA,
           isoform A protein.
          Length = 489

 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 13/214 (6%)
 Frame = +2

Query: 77  DIVYYSSLLVCISLGRNYRKISDIEMKRNYXXXXXXXXXXXXXXRYLYHAIIMVWGNIVI 256
           D++Y   LL CI  G   +KI+D   ++                 +  H  + +      
Sbjct: 5   DVIYVICLLGCIGAGSYVKKIADEGQRKLVSTGLGVLVVVIVSGLHSLHCFVSLALGTAA 64

Query: 257 IKCCERRYVHQMSLGFTWLDLLYIHCNVDDAVYAI-----WVHQTIALRLVGLAFELNSA 421
           +        H ++    +  L++    + D  + I      +   + L++ G+AFE  +A
Sbjct: 65  VLLVHPSKGHLVTFAVMFGYLVFFR--IFDFYFGIPGHTNMIQMILTLKVSGIAFEKTAA 122

Query: 422 --------DMTKLEQKPGPSSVKINIADVDSIHVEPYAVDIIAYAFFFVGLHKDSYYRWA 577
                   +  K +Q+       I I D D       A +I+ Y+F ++G+    YYR+ 
Sbjct: 123 WKRLQAHDEQKKNDQRDVHQESPIEITDYDVELQSLSAAEILHYSFNYIGVLTGPYYRYR 182

Query: 578 VFNDHFRNSLSSIGDCRTLTEQKLKKAFLSCIAY 679
            + D+F     +       T +KLK A   C  Y
Sbjct: 183 TYRDYFEMPFKTYAPTVEATLEKLKYAVFYCALY 216


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,969,786
Number of Sequences: 53049
Number of extensions: 566442
Number of successful extensions: 1298
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1298
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)