Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6l20
         (716 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical ...    31   0.82 
AF039049-10|AAB94247.1|  548|Caenorhabditis elegans Cytochrome p...    30   1.4  
Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z84574-7|CAB06544.3|  928|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z84574-1|CAE54890.1|  577|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z48055-8|CAA88133.2|  379|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical ...    29   2.5  
AL022593-3|CAA18635.3|  928|Caenorhabditis elegans Hypothetical ...    29   2.5  

>AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical
           protein VW02B12L.3 protein.
          Length = 299

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +2

Query: 389 EFLEYCYSYYNFDAFMASSKFCGLVKNFGQYQEKLKVETFSKPTAEFSKVIAS 547
           EFL++ Y +YN +      ++  +   FG+    LK  T S+P A  ++ +A+
Sbjct: 105 EFLQWFYKFYNANLTTEPEEYDAVGARFGEDLPALKGSTGSRPVAAPARPVAA 157


>AF039049-10|AAB94247.1|  548|Caenorhabditis elegans Cytochrome p450
           family protein 35B1 protein.
          Length = 548

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
 Frame = +2

Query: 416 YNFDAFMASSKFCGLVKNFGQYQEK-----LKVETFSKPTAEFSKVIASEMKPNEKCHKN 580
           + F+ F+   KFC   +   +Y+EK       V+ F K  + F +   +E+  +    K 
Sbjct: 156 WGFELFLVQKKFCRTFRRIFKYREKFLNSQFPVQNFEKSVSSFRRFSCAEIDADAVNGKT 215

Query: 581 IVIT 592
           IV T
Sbjct: 216 IVHT 219


>Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 236 CYEQIKKSVLEWQAWLSKINQKNKWHHINSP 328
           C+ ++K    E   W   + ++ +WH+ NSP
Sbjct: 462 CFTELKLKESELAEWEKDLTEREQWHNQNSP 492


>Z84574-7|CAB06544.3|  928|Caenorhabditis elegans Hypothetical
           protein F33E2.2a protein.
          Length = 928

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 236 CYEQIKKSVLEWQAWLSKINQKNKWHHINSP 328
           C+ ++K    E   W   + ++ +WH+ NSP
Sbjct: 462 CFTELKLKESELAEWEKDLTEREQWHNQNSP 492


>Z84574-1|CAE54890.1|  577|Caenorhabditis elegans Hypothetical
           protein F33E2.2c protein.
          Length = 577

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 236 CYEQIKKSVLEWQAWLSKINQKNKWHHINSP 328
           C+ ++K    E   W   + ++ +WH+ NSP
Sbjct: 462 CFTELKLKESELAEWEKDLTEREQWHNQNSP 492


>Z48055-8|CAA88133.2|  379|Caenorhabditis elegans Hypothetical
           protein T07A5.1 protein.
          Length = 379

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/38 (31%), Positives = 25/38 (65%)
 Frame = +2

Query: 329 IVWKEMLMKGSKPVYIGGASEFLEYCYSYYNFDAFMAS 442
           +++K++   GS   ++GGAS  ++Y Y+Y  +D + A+
Sbjct: 281 LMYKDVHKNGSVINWVGGASNDIKYKYTYPAYDPWCAA 318


>AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 236 CYEQIKKSVLEWQAWLSKINQKNKWHHINSP 328
           C+ ++K    E   W   + ++ +WH+ NSP
Sbjct: 462 CFTELKLKESELAEWEKDLTEREQWHNQNSP 492


>AL022593-3|CAA18635.3|  928|Caenorhabditis elegans Hypothetical
           protein F33E2.2a protein.
          Length = 928

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 236 CYEQIKKSVLEWQAWLSKINQKNKWHHINSP 328
           C+ ++K    E   W   + ++ +WH+ NSP
Sbjct: 462 CFTELKLKESELAEWEKDLTEREQWHNQNSP 492


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,696,411
Number of Sequences: 27780
Number of extensions: 362627
Number of successful extensions: 971
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)