Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6l19
         (715 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81057-6|CAB02913.1|  221|Caenorhabditis elegans Hypothetical pr...   249   1e-66
D85499-1|BAA12821.1|  221|Caenorhabditis elegans manganese super...   249   1e-66
D12984-1|BAA02363.1|  221|Caenorhabditis elegans manganese super...   249   1e-66
X85790-1|CAA59790.1|  218|Caenorhabditis elegans mangenese super...   234   4e-62
X77021-1|CAA54319.1|  218|Caenorhabditis elegans manganese super...   234   4e-62
U42844-5|AAB53822.1|  218|Caenorhabditis elegans Sod (superoxide...   234   4e-62
Z81545-2|CAB04438.1|  212|Caenorhabditis elegans Hypothetical pr...    33   0.27 
U80447-8|AAB37812.3|  900|Caenorhabditis elegans Patched related...    29   4.4  
AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical...    29   4.4  
Z82288-5|CAB05324.1|  380|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z81555-3|CAB04513.1|  221|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AF026555-1|AAB97516.1|  221|Caenorhabditis elegans GATA transcri...    28   5.8  
AC006674-8|AAF39938.2|  131|Caenorhabditis elegans Hypothetical ...    28   5.8  

>Z81057-6|CAB02913.1|  221|Caenorhabditis elegans Hypothetical
           protein F10D11.1 protein.
          Length = 221

 Score =  249 bits (610), Expect = 1e-66
 Identities = 118/198 (59%), Positives = 139/198 (70%)
 Frame = +3

Query: 120 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLYV 299
           +  +S+ +  +  VA A R KH+LP+LPY+Y  LEPVIS EIM LHH KHHATY+NNL  
Sbjct: 6   VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64

Query: 300 XXXXXXXXXXXXDTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKTVPSCPFSQAVEKDF 479
                       +    + L  A+KFNGGGHINHSIFW NL      PS     A++ DF
Sbjct: 65  IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124

Query: 480 GSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVW 659
           GS DNL+ QLS ++VAVQGSGWGWLGY  + K L++ATC NQDPL+ATTGLVPLFGIDVW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184

Query: 660 EHAYYLQYKNVRADYVKA 713
           EHAYYLQYKNVR DYV A
Sbjct: 185 EHAYYLQYKNVRPDYVNA 202


>D85499-1|BAA12821.1|  221|Caenorhabditis elegans manganese
           superoxide dismutase protein.
          Length = 221

 Score =  249 bits (610), Expect = 1e-66
 Identities = 118/198 (59%), Positives = 139/198 (70%)
 Frame = +3

Query: 120 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLYV 299
           +  +S+ +  +  VA A R KH+LP+LPY+Y  LEPVIS EIM LHH KHHATY+NNL  
Sbjct: 6   VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64

Query: 300 XXXXXXXXXXXXDTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKTVPSCPFSQAVEKDF 479
                       +    + L  A+KFNGGGHINHSIFW NL      PS     A++ DF
Sbjct: 65  IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124

Query: 480 GSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVW 659
           GS DNL+ QLS ++VAVQGSGWGWLGY  + K L++ATC NQDPL+ATTGLVPLFGIDVW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184

Query: 660 EHAYYLQYKNVRADYVKA 713
           EHAYYLQYKNVR DYV A
Sbjct: 185 EHAYYLQYKNVRPDYVNA 202


>D12984-1|BAA02363.1|  221|Caenorhabditis elegans manganese
           superoxide dismutaseprecursor protein.
          Length = 221

 Score =  249 bits (610), Expect = 1e-66
 Identities = 118/198 (59%), Positives = 139/198 (70%)
 Frame = +3

Query: 120 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLYV 299
           +  +S+ +  +  VA A R KH+LP+LPY+Y  LEPVIS EIM LHH KHHATY+NNL  
Sbjct: 6   VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64

Query: 300 XXXXXXXXXXXXDTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKTVPSCPFSQAVEKDF 479
                       +    + L  A+KFNGGGHINHSIFW NL      PS     A++ DF
Sbjct: 65  IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124

Query: 480 GSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVW 659
           GS DNL+ QLS ++VAVQGSGWGWLGY  + K L++ATC NQDPL+ATTGLVPLFGIDVW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184

Query: 660 EHAYYLQYKNVRADYVKA 713
           EHAYYLQYKNVR DYV A
Sbjct: 185 EHAYYLQYKNVRPDYVNA 202


>X85790-1|CAA59790.1|  218|Caenorhabditis elegans mangenese
           superoxide dismutase protein.
          Length = 218

 Score =  234 bits (573), Expect = 4e-62
 Identities = 113/187 (60%), Positives = 131/187 (70%), Gaps = 2/187 (1%)
 Frame = +3

Query: 159 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLYVXXXXXXXXXXX 332
           VAG  A R KHTLP+LP++Y  LEPVIS EIM LHH KHHATY+NNL             
Sbjct: 16  VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75

Query: 333 XDTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKTVPSCPFSQAVEKDFGSWDNLKNQLS 512
            +    + L  A+KFNGGGHINHSIFW NL      PS      +++DFGS DNL+ +LS
Sbjct: 76  GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135

Query: 513 TASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNV 692
             ++AVQGSGWGWLGY K+ K L+IATC NQDPL+   G+VPLFGIDVWEHAYYLQYKNV
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQYKNV 192

Query: 693 RADYVKA 713
           R DYV A
Sbjct: 193 RPDYVHA 199


>X77021-1|CAA54319.1|  218|Caenorhabditis elegans manganese
           superoxide dismutase protein.
          Length = 218

 Score =  234 bits (573), Expect = 4e-62
 Identities = 113/187 (60%), Positives = 131/187 (70%), Gaps = 2/187 (1%)
 Frame = +3

Query: 159 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLYVXXXXXXXXXXX 332
           VAG  A R KHTLP+LP++Y  LEPVIS EIM LHH KHHATY+NNL             
Sbjct: 16  VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75

Query: 333 XDTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKTVPSCPFSQAVEKDFGSWDNLKNQLS 512
            +    + L  A+KFNGGGHINHSIFW NL      PS      +++DFGS DNL+ +LS
Sbjct: 76  GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135

Query: 513 TASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNV 692
             ++AVQGSGWGWLGY K+ K L+IATC NQDPL+   G+VPLFGIDVWEHAYYLQYKNV
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQYKNV 192

Query: 693 RADYVKA 713
           R DYV A
Sbjct: 193 RPDYVHA 199


>U42844-5|AAB53822.1|  218|Caenorhabditis elegans Sod (superoxide
           dismutase) protein3 protein.
          Length = 218

 Score =  234 bits (573), Expect = 4e-62
 Identities = 113/187 (60%), Positives = 131/187 (70%), Gaps = 2/187 (1%)
 Frame = +3

Query: 159 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLYVXXXXXXXXXXX 332
           VAG  A R KHTLP+LP++Y  LEPVIS EIM LHH KHHATY+NNL             
Sbjct: 16  VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75

Query: 333 XDTNTILNLLSAIKFNGGGHINHSIFWLNLTPCKTVPSCPFSQAVEKDFGSWDNLKNQLS 512
            +    + L  A+KFNGGGHINHSIFW NL      PS      +++DFGS DNL+ +LS
Sbjct: 76  GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135

Query: 513 TASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNV 692
             ++AVQGSGWGWLGY K+ K L+IATC NQDPL+   G+VPLFGIDVWEHAYYLQYKNV
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQYKNV 192

Query: 693 RADYVKA 713
           R DYV A
Sbjct: 193 RPDYVHA 199


>Z81545-2|CAB04438.1|  212|Caenorhabditis elegans Hypothetical
           protein F49H6.2 protein.
          Length = 212

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +2

Query: 500 ESTVDSFCGSTGLRLGLAWLQQTNEEIANSYMPEPGSSAGHHWIGPALRNRCMGA 664
           + T DS C S G  L     Q+  + +ANS++   G+S+   WIG      CM +
Sbjct: 90  QPTADSLCSSEGAVLSSIQSQEELDYMANSFIALNGASSA-FWIGAERTAACMSS 143


>U80447-8|AAB37812.3|  900|Caenorhabditis elegans Patched related
           family protein 10 protein.
          Length = 900

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 357 LLSAIKFNGGGHINHSIFWLNLTPCKTVPSC 449
           L  A+ ++    +N  +FWL   P K +PSC
Sbjct: 445 LRPAVTYSSTSPLNVKLFWLGSQPQKPLPSC 475


>AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical
           protein Y47D3A.29 protein.
          Length = 1428

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = -2

Query: 552 ANPSLSPVLPQKLSTVDSLSYPRIQSLFQQLVKMDRRVLSYTE 424
           A+P  SPV  +K++ V++ + P IQ + ++ VKM+   L   E
Sbjct: 237 ASPVTSPVKTEKMAEVEAPTAPAIQKI-EETVKMETEHLEEVE 278


>Z82288-5|CAB05324.1|  380|Caenorhabditis elegans Hypothetical
           protein ZK896.7 protein.
          Length = 380

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 503 STVDSFCGSTGLRLGLAWLQQTNEEIANSYMPEPGSSAGHHWIG 634
           +T   +C S G  L       T+  +A+S   E GS+ G  WIG
Sbjct: 45  NTAKEYCDSHGYSLATVDNAITSNFLASSAATEFGSNNGQFWIG 88


>Z81555-3|CAB04513.1|  221|Caenorhabditis elegans Hypothetical
           protein F58E10.2 protein.
          Length = 221

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 597 QNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADY 704
           Q+ DP Q +T + P+FG     + Y  QY  +  DY
Sbjct: 72  QSYDPAQQSTPVHPMFGSLDMMNCYSQQYPQIGQDY 107


>AF026555-1|AAB97516.1|  221|Caenorhabditis elegans GATA
           transcription factor END-1 protein.
          Length = 221

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 597 QNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADY 704
           Q+ DP Q +T + P+FG     + Y  QY  +  DY
Sbjct: 72  QSYDPAQQSTPVHPMFGSLDMMNCYSQQYPQIGQDY 107


>AC006674-8|AAF39938.2|  131|Caenorhabditis elegans Hypothetical
           protein K12H6.9 protein.
          Length = 131

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = +1

Query: 166 VLLARSILCQSFRTSTMHWSRSLAVKS*VFITANITRLISTIYTLLKR 309
           +LLA ++ C +     + W+    ++S + + A  T  +ST+Y+L+ R
Sbjct: 6   LLLALTVFCAA---DALDWTALFGIQSKLILQAKKTNSLSTLYSLIPR 50


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,284,676
Number of Sequences: 27780
Number of extensions: 338561
Number of successful extensions: 846
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)