Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6l16
(673 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 346 8e-96
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 346 8e-96
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 346 8e-96
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 344 3e-95
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 320 6e-88
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 318 2e-87
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 318 2e-87
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 318 2e-87
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 318 3e-87
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 315 2e-86
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 315 2e-86
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 314 4e-86
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 294 3e-80
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 291 4e-79
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 275 2e-74
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 248 3e-66
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 169 1e-42
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 167 5e-42
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 166 1e-41
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 166 1e-41
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 166 1e-41
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 165 2e-41
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 140 8e-34
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 140 8e-34
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 87 8e-18
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 87 8e-18
AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical ... 30 1.3
Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical pr... 29 3.0
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 4.0
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 4.0
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 4.0
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 6.9
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 6.9
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 6.9
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 6.9
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 6.9
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 6.9
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 6.9
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 6.9
AC006722-1|AAK68420.1| 401|Caenorhabditis elegans Hypothetical ... 28 6.9
AC006645-6|AAF39847.1| 462|Caenorhabditis elegans Hypothetical ... 28 6.9
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 27 9.2
U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone... 27 9.2
AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear recep... 27 9.2
AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear recep... 27 9.2
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 346 bits (851), Expect = 8e-96
Identities = 156/192 (81%), Positives = 171/192 (89%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDGQMPSDK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAV +DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
R+R+LAD CTGLQGFL+ LLMERLSVDYGKK+KLEF+IYPAPQ+STA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 638 VVEPYNSILTTH 673
VVEPYNSILTTH
Sbjct: 181 VVEPYNSILTTH 192
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 346 bits (851), Expect = 8e-96
Identities = 156/192 (81%), Positives = 171/192 (89%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDGQMPSDK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAV +DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
R+R+LAD CTGLQGFL+ LLMERLSVDYGKK+KLEF+IYPAPQ+STA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 638 VVEPYNSILTTH 673
VVEPYNSILTTH
Sbjct: 181 VVEPYNSILTTH 192
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 346 bits (851), Expect = 8e-96
Identities = 156/192 (81%), Positives = 171/192 (89%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDGQMPSDK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAV +DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
R+R+LAD CTGLQGFL+ LLMERLSVDYGKK+KLEF+IYPAPQ+STA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 638 VVEPYNSILTTH 673
VVEPYNSILTTH
Sbjct: 181 VVEPYNSILTTH 192
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 344 bits (846), Expect = 3e-95
Identities = 155/191 (81%), Positives = 170/191 (89%)
Frame = +2
Query: 101 RECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKH 280
RE ISIH GQAGVQIGNACWELYCLEHGIQPDGQMPSDK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 281 VPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VPRAV +DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 461 VRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTAV 640
+R+LAD CTGLQGFL+ LLMERLSVDYGKK+KLEF+IYPAPQ+STAV
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
Query: 641 VEPYNSILTTH 673
VEPYNSILTTH
Sbjct: 181 VEPYNSILTTH 191
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 320 bits (786), Expect = 6e-88
Identities = 144/192 (75%), Positives = 165/192 (85%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MPSD+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPR++F+DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
R+R+LAD C+GLQGF + LLMERLSVDYGKKSKLEF+IYPAPQ+STA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 638 VVEPYNSILTTH 673
VVEPYNSILTTH
Sbjct: 179 VVEPYNSILTTH 190
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 318 bits (781), Expect = 2e-87
Identities = 143/192 (74%), Positives = 165/192 (85%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MP+ T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPR++F+DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
R+R+LAD C+GLQGF + LLMERLSVDYGKKSKLEF+IYPAPQ+STA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 638 VVEPYNSILTTH 673
VVEPYNSILTTH
Sbjct: 179 VVEPYNSILTTH 190
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 318 bits (781), Expect = 2e-87
Identities = 143/192 (74%), Positives = 164/192 (85%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MPSD+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPR++F+DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
R+R+LAD C+GLQGF + LLMERLSVDYGKKSKLEF+IYPAPQ+ TA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTA 178
Query: 638 VVEPYNSILTTH 673
VVEPYNSILTTH
Sbjct: 179 VVEPYNSILTTH 190
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 318 bits (781), Expect = 2e-87
Identities = 143/192 (74%), Positives = 165/192 (85%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MP+ T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPR++F+DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
R+R+LAD C+GLQGF + LLMERLSVDYGKKSKLEF+IYPAPQ+STA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 638 VVEPYNSILTTH 673
VVEPYNSILTTH
Sbjct: 179 VVEPYNSILTTH 190
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 318 bits (780), Expect = 3e-87
Identities = 142/194 (73%), Positives = 163/194 (84%)
Frame = +2
Query: 92 NKMRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGA 271
N+ RE ISIH GQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET A
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 272 GKHVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 451
GKHVPRA+ +DLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 452 LDRVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQIS 631
+DRVR+L + C GLQGFL+ LLMERLSVDYGKKSKLEF IYPAPQ+S
Sbjct: 124 MDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVS 183
Query: 632 TAVVEPYNSILTTH 673
T++VEPYNSILTTH
Sbjct: 184 TSMVEPYNSILTTH 197
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 315 bits (773), Expect = 2e-86
Identities = 142/192 (73%), Positives = 163/192 (84%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MPS++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPR++F+DLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
R+R+LAD C+GLQGF + LLMERLSVDYGKKSKLEF+IYPAPQ+STA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 638 VVEPYNSILTTH 673
VVEPYNSILTTH
Sbjct: 179 VVEPYNSILTTH 190
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 315 bits (773), Expect = 2e-86
Identities = 142/192 (73%), Positives = 163/192 (84%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MPS++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPR++F+DLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
R+R+LAD C+GLQGF + LLMERLSVDYGKKSKLEF+IYPAPQ+STA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 638 VVEPYNSILTTH 673
VVEPYNSILTTH
Sbjct: 179 VVEPYNSILTTH 190
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 314 bits (771), Expect = 4e-86
Identities = 140/192 (72%), Positives = 163/192 (84%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE +SIH GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRA+F+DLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
RVR+L ++C LQGFLI L+MERLS+DYGKK+KLEF+IYPAPQIST+
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 638 VVEPYNSILTTH 673
+VEPYNS+LTTH
Sbjct: 181 MVEPYNSLLTTH 192
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 294 bits (722), Expect = 3e-80
Identities = 133/192 (69%), Positives = 154/192 (80%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGI PDG + G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPR++F+DLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
R+R+LA+ C GLQGF + +LMERLS +YGKKSKLEF+IYPAPQIST+
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTS 177
Query: 638 VVEPYNSILTTH 673
VVEPYNSILTTH
Sbjct: 178 VVEPYNSILTTH 189
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 291 bits (713), Expect = 4e-79
Identities = 132/191 (69%), Positives = 153/191 (80%)
Frame = +2
Query: 101 RECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKH 280
RE ISIH GQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 281 VPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VPR +F+DLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 461 VRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTAV 640
V++LA+ C GLQGF+I LLMERLS +YGKK KLEFAIYPAPQ+ST++
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 187
Query: 641 VEPYNSILTTH 673
VEPYNSIL TH
Sbjct: 188 VEPYNSILMTH 198
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 275 bits (674), Expect = 2e-74
Identities = 122/191 (63%), Positives = 148/191 (77%)
Frame = +2
Query: 101 RECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKH 280
REC+SIH GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 281 VPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VPRA+++DLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 461 VRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTAV 640
+RK + C GLQGFL+ LLMERLSV++GKKSKLEF++YPAPQ+ST+V
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
Query: 641 VEPYNSILTTH 673
VEPYNSILTTH
Sbjct: 185 VEPYNSILTTH 195
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 248 bits (607), Expect = 3e-66
Identities = 112/170 (65%), Positives = 134/170 (78%)
Frame = +2
Query: 164 LYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTVVDEVRTGT 343
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +F+DLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 344 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLADQCTGLQGFLIXXXXX 523
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DRV++LA+ C GLQGF+I
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 524 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTH 673
LLMERLS +YGKK KLEFAIYPAPQ+ST++VEPYNSIL TH
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTH 170
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 169 bits (412), Expect = 1e-42
Identities = 81/192 (42%), Positives = 115/192 (59%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + + AGQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
VRK A+ C LQGF + LL+ ++ +Y + F++ P+P++S
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 638 VVEPYNSILTTH 673
VVEPYN+ L+ H
Sbjct: 179 VVEPYNATLSVH 190
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 167 bits (407), Expect = 5e-42
Identities = 79/192 (41%), Positives = 116/192 (60%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + + AGQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
+RK A+ C LQGF + LL+ ++ +Y + F++ P+P++S
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 638 VVEPYNSILTTH 673
VVEPYN+ L+ H
Sbjct: 179 VVEPYNATLSVH 190
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 166 bits (404), Expect = 1e-41
Identities = 78/192 (40%), Positives = 116/192 (60%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + + AGQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
+RK A+ C LQGF + LL+ ++ ++ + F++ P+P++S
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDT 178
Query: 638 VVEPYNSILTTH 673
VVEPYN+ L+ H
Sbjct: 179 VVEPYNATLSVH 190
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 166 bits (404), Expect = 1e-41
Identities = 81/192 (42%), Positives = 115/192 (59%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + I AGQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
VRK A+ LQGF + LL+ ++ +Y + F++ P+P++S
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 638 VVEPYNSILTTH 673
VVEPYN+ L+ H
Sbjct: 179 VVEPYNATLSVH 190
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 166 bits (404), Expect = 1e-41
Identities = 81/192 (42%), Positives = 115/192 (59%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + I AGQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
VRK A+ LQGF + LL+ ++ +Y + F++ P+P++S
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 638 VVEPYNSILTTH 673
VVEPYN+ L+ H
Sbjct: 179 VVEPYNATLSVH 190
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 165 bits (402), Expect = 2e-41
Identities = 80/192 (41%), Positives = 112/192 (58%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + I AGQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRA +DLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
VRK A+ C LQGF + LL+ ++ +Y + + F++ P+P++S
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDT 178
Query: 638 VVEPYNSILTTH 673
VVEPYN+ L+ H
Sbjct: 179 VVEPYNATLSVH 190
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 140 bits (339), Expect = 8e-34
Identities = 70/190 (36%), Positives = 107/190 (56%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
M+E I++ GQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRA+ +DL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
+R+ A+ L+GF + LL+ +L +Y K+ +I P+ ++S
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 638 VVEPYNSILT 667
VVEPYN+IL+
Sbjct: 179 VVEPYNAILS 188
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 140 bits (339), Expect = 8e-34
Identities = 70/190 (36%), Positives = 107/190 (56%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
M+E I++ GQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRA+ +DL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 637
+R+ A+ L+GF + LL+ +L +Y K+ +I P+ ++S
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 638 VVEPYNSILT 667
VVEPYN+IL+
Sbjct: 179 VVEPYNAILS 188
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 87.4 bits (207), Expect = 8e-18
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Frame = +2
Query: 110 ISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPR 289
+++H GQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 290 AVFIDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 460
AV +DLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 461 VRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQIST-A 637
+ + A+ L G L LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 638 VVEPYNSILT 667
VV PYN +L+
Sbjct: 184 VVHPYNWVLS 193
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 87.4 bits (207), Expect = 8e-18
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Frame = +2
Query: 110 ISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPR 289
+++H GQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 290 AVFIDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 460
AV +DLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 461 VRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQIST-A 637
+ + A+ L G L LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 638 VVEPYNSILT 667
VV PYN +L+
Sbjct: 184 VVHPYNWVLS 193
>AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical
protein Y32F6A.3 protein.
Length = 655
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = -2
Query: 273 PAPVSLKNVLKESSPPPTVLSEGICPSGWMPCSRQYSSQHALPICTPAWPAWIDMHS 103
P PV L + + + PT +C W P + H +PI TPA+P H+
Sbjct: 273 PHPVVLNEMNNDRNDIPT-----LCELVWDPRRKNTDRFHVMPIITPAFPEQNSTHN 324
>Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical
protein M05B5.3 protein.
Length = 403
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 576 STERRSIRSDAKPDPVPPPN 517
S R SI SDA P+P PPP+
Sbjct: 213 SETRVSIESDAPPNPAPPPS 232
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 140 QIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTV 319
QI +C CL +G++P G P + G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 320 VDE 328
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 140 QIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTV 319
QI +C CL +G++P G P + G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 320 VDE 328
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 140 QIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTV 319
QI +C CL +G++P G P + G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 320 VDE 328
DE
Sbjct: 116 ADE 118
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>AC006722-1|AAK68420.1| 401|Caenorhabditis elegans Hypothetical
protein Y19D10A.7 protein.
Length = 401
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 180 CSRQYSSQHALPICTPAWPAWIDMHSRI-LFYFNINSSNYTNFYFEKTLLQLDCRPNLK 7
CS + + + I P + W D H+ I L N+ S +N YF + ++L PNLK
Sbjct: 116 CSTKSRLKPPVDIIEPQF-MWGDNHNMINLGLVNLTSIGCSNIYFLRNTVRLLNLPNLK 173
>AC006645-6|AAF39847.1| 462|Caenorhabditis elegans Hypothetical
protein F56A4.9 protein.
Length = 462
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 180 CSRQYSSQHALPICTPAWPAWIDMHSRI-LFYFNINSSNYTNFYFEKTLLQLDCRPNLK 7
CS + + + I P + W D H+ I L N+ S +N YF + ++L PNLK
Sbjct: 116 CSTKSRLKPPVDIIEPQF-MWGDNHNMINLGLVNLTSIGCSNIYFLRNTVRLLNLPNLK 173
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 173 LEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLE 310
L H Q D +P++ VGGG +F+ + +HV + F D E
Sbjct: 29 LNHLGQVDN-IPNNSAVGGGGAAFHHLHTSAATPRHVATSEFYDDE 73
>U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 44 protein.
Length = 428
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 248 TFFSETGAGKHVPRAVFIDLEPTVVD 325
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 428
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 248 TFFSETGAGKHVPRAVFIDLEPTVVD 325
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 423
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 248 TFFSETGAGKHVPRAVFIDLEPTVVD 325
T ++ TG+GK++ F DL P + D
Sbjct: 131 TTYTSTGSGKNIEYITFFDLTPIIKD 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,943,497
Number of Sequences: 27780
Number of extensions: 345588
Number of successful extensions: 1041
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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