Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6k20
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75712-8|CAB00047.1| 319|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p... 32 0.39
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein. 32 0.39
AF101312-4|AAC69220.1| 358|Caenorhabditis elegans Hypothetical ... 32 0.39
AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts hom... 31 0.51
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 31 0.67
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 31 0.67
U29380-4|AAA68738.1| 646|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF045646-8|AAK29830.1| 541|Caenorhabditis elegans Udp-glucurono... 30 1.6
Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical pr... 29 2.7
EF472000-1|ABQ96385.1| 1142|Caenorhabditis elegans SMG-3 protein. 29 2.7
AC084197-22|AAK68590.2| 1142|Caenorhabditis elegans Suppressor w... 29 2.7
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81495-7|CAB04060.1| 444|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical pr... 28 6.3
U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein. 28 6.3
U10438-4|AAA19085.2| 344|Caenorhabditis elegans Hypothetical pr... 28 6.3
L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage stimul... 28 6.3
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 28 6.3
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 28 6.3
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 28 6.3
Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z75547-1|CAA99908.2| 621|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z46242-9|CAA86334.2| 491|Caenorhabditis elegans Hypothetical pr... 27 8.3
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 27 8.3
AY204168-1|AAO39172.1| 395|Caenorhabditis elegans nuclear recep... 27 8.3
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 27 8.3
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 27 8.3
>Z75712-8|CAB00047.1| 319|Caenorhabditis elegans Hypothetical
protein K04G2.10 protein.
Length = 319
Score = 33.1 bits (72), Expect = 0.17
Identities = 24/97 (24%), Positives = 43/97 (44%)
Frame = +1
Query: 160 WKSTRRLRVKKREEKIWDEFVKEQDIVHSVCEDDPYQFXXXXXXXXXXXXMKSELQKMKN 339
WK + ++ EK+ D + +QD+V + E+D Q MK ++KM+
Sbjct: 215 WKDAIEQKWSEKYEKLRDYALDQQDMVKYMEENDDRQKESIEKYKRKIGSMKKVIEKMEF 274
Query: 340 EQLLEELEAFQSDDAQQYMVEDDVHAPQHVEEVHHIS 450
E L + E D + VE V++ + E ++S
Sbjct: 275 EMALLQSELEMKDSS---CVEKSVNSEEKQENKENLS 308
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 32.3 bits (70), Expect = 0.29
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +1
Query: 319 ELQKMKNEQLLEELEAFQSDDAQQYMVEDDVH--APQHVEEVHHISYNEDDEGDDGVFHI 492
EL+K+K +Q ++E + DD +DDV APQ +++ D +
Sbjct: 189 ELRKLKKQQKTAKVEVVEDDDDDDDEDDDDVEAPAPQEPSRKQKAHNQREEKKDKNKKYQ 248
Query: 493 FDSEKDEVSGQEDNQIDSTGSPCTVRENKDDAQSS 597
E+ ++ +D++ D + KDD +
Sbjct: 249 PVKEEPDLDDDDDDEDDDDDDGDDDDDEKDDGNDA 283
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 32.3 bits (70), Expect = 0.29
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +1
Query: 319 ELQKMKNEQLLEELEAFQSDDAQQYMVEDDVH--APQHVEEVHHISYNEDDEGDDGVFHI 492
EL+K+K +Q ++E + DD +DDV APQ +++ D +
Sbjct: 189 ELRKLKKQQKTAKVEVVEDDDDDDDEDDDDVEAPAPQEPSRKQKAHNQREEKKDKNKKYQ 248
Query: 493 FDSEKDEVSGQEDNQIDSTGSPCTVRENKDDAQSS 597
E+ ++ +D++ D + KDD +
Sbjct: 249 PVKEEPDLDDDDDDEDDDDDDGDDDDDEKDDGNDA 283
>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 31.9 bits (69), Expect = 0.39
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +1
Query: 400 EDDVHAPQHVEEVHHISYNEDDEGDDGVFHIFDSEKDEVSGQEDNQIDSTGSPCTVRENK 579
EDD VE+ + + +DD+G+DG+ + E++E+ ED D G +R K
Sbjct: 197 EDDARDVFGVEDFNLDEFYDDDDGEDGL----EDEEEEII--ED---DGEGGEIKIRRKK 247
Query: 580 DDAQSST 600
D + ST
Sbjct: 248 DTTKKST 254
>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 31.9 bits (69), Expect = 0.39
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +1
Query: 400 EDDVHAPQHVEEVHHISYNEDDEGDDGVFHIFDSEKDEVSGQEDNQIDSTGSPCTVRENK 579
EDD VE+ + + +DD+G+DG+ + E++E+ ED D G +R K
Sbjct: 197 EDDARDVFGVEDFNLDEFYDDDDGEDGL----EDEEEEII--ED---DGEGGEIKIRRKK 247
Query: 580 DDAQSST 600
D + ST
Sbjct: 248 DTTKKST 254
>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
Length = 1521
Score = 31.9 bits (69), Expect = 0.39
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +1
Query: 400 EDDVHAPQHVEEVHHISYNEDDEGDDGVFHIFDSEKDEVSGQEDNQIDSTGSPCTVRENK 579
EDD VE+ + + +DD+G+DG+ + E++E+ ED D G +R K
Sbjct: 197 EDDARDVFGVEDFNLDEFYDDDDGEDGL----EDEEEEII--ED---DGEGGEIKIRRKK 247
Query: 580 DDAQSST 600
D + ST
Sbjct: 248 DTTKKST 254
>AF101312-4|AAC69220.1| 358|Caenorhabditis elegans Hypothetical
protein F56E10.1 protein.
Length = 358
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +1
Query: 445 ISYNEDDEGDDGVFHIF----DSEKDEVSGQEDNQIDSTGSPCTVRENKDDAQSSTDS 606
I NEDDE DG + D+E ++ +G E+++ + S E+ D+ +S DS
Sbjct: 15 IELNEDDESSDGENSVIILDSDTEPEDGAGGEEDEDNGEDSEEEDEEDSDEEESEDDS 72
>AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts
homolog) family protein 6 protein.
Length = 1186
Score = 31.5 bits (68), Expect = 0.51
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 448 SYNEDDEGDDGVFHIFDSEKDEVSGQEDNQIDSTGSPCTVRENKDDAQSST 600
S EDD+GD+ F + ++E+ E S ++++ D S C V E+ + ST
Sbjct: 82 SEGEDDDGDED-FEMKEAEEHESS--DESEADENASDCEVVESPESTPQST 129
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/94 (18%), Positives = 43/94 (45%)
Frame = +1
Query: 331 MKNEQLLEELEAFQSDDAQQYMVEDDVHAPQHVEEVHHISYNEDDEGDDGVFHIFDSEKD 510
M + E + +F+ + ++ + HAP ++ + ++++E DD D +++
Sbjct: 535 MSKKPAPELISSFKEPTSSDSLLRKEAHAPNELK----LDDSDEEEDDDDEDEEEDEDEE 590
Query: 511 EVSGQEDNQIDSTGSPCTVRENKDDAQSSTDSPE 612
E E+++ + E+ +D +S +S E
Sbjct: 591 EEDEDEEDEEEEENESEEEEEDDEDEESEEESDE 624
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 337 NEQLLEELEAFQSDDAQQYMVEDDVHAPQHVEEVHHISYNE-DDEGDDGVFHIFDSEKDE 513
NE L++ + + DD + ++D EE NE ++E +D + E DE
Sbjct: 565 NELKLDDSDEEEDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEEDDEDEESEEESDE 624
Query: 514 VSGQEDNQIDS 546
+E+ + DS
Sbjct: 625 EDEEEEEEDDS 635
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/94 (18%), Positives = 43/94 (45%)
Frame = +1
Query: 331 MKNEQLLEELEAFQSDDAQQYMVEDDVHAPQHVEEVHHISYNEDDEGDDGVFHIFDSEKD 510
M + E + +F+ + ++ + HAP ++ + ++++E DD D +++
Sbjct: 545 MSKKPAPELISSFKEPTSSDSLLRKEAHAPNELK----LDDSDEEEDDDDEDEEEDEDEE 600
Query: 511 EVSGQEDNQIDSTGSPCTVRENKDDAQSSTDSPE 612
E E+++ + E+ +D +S +S E
Sbjct: 601 EEDEDEEDEEEEENESEEEEEDDEDEESEEESDE 634
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 337 NEQLLEELEAFQSDDAQQYMVEDDVHAPQHVEEVHHISYNE-DDEGDDGVFHIFDSEKDE 513
NE L++ + + DD + ++D EE NE ++E +D + E DE
Sbjct: 575 NELKLDDSDEEEDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEEDDEDEESEEESDE 634
Query: 514 VSGQEDNQIDS 546
+E+ + DS
Sbjct: 635 EDEEEEEEDDS 645
>U29380-4|AAA68738.1| 646|Caenorhabditis elegans Hypothetical
protein ZK546.5 protein.
Length = 646
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 400 EDDVHAPQHVEEVHHISYNEDDEGDDGVFHI 492
EDD +HVE+V H E+ EGD+GV I
Sbjct: 610 EDDTLEEEHVEDVDH-QIIENVEGDEGVIEI 639
>AF045646-8|AAK29830.1| 541|Caenorhabditis elegans
Udp-glucuronosyltransferase protein52 protein.
Length = 541
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 127 KYIEGEELERTW-KSTRRLRVKKREEKIWDEFVKEQDIVHSVCE 255
KY G + E W K+ L K E+ W+E DIV +CE
Sbjct: 85 KYTYGFQEESPWNKAPHLLNPFKGRERTWNEHTYYMDIVTDLCE 128
>Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical
protein F56G4.4 protein.
Length = 470
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +1
Query: 106 DNAANELKYIEGEELERTWKSTRRLRVKKR--EEKIWDEFVKEQDIVHSVCEDDPYQFXX 279
D N+ K + EE + W+ RR + +R +E+ E +++D+ ++D +F
Sbjct: 278 DKPNNKFKKLTKEEKKAQWEERRRQKDTERAEDEERRREAEEDEDVSDEESDEDEEEFEI 337
Query: 280 XXXXXXXXXXMKSELQKMKNEQLLEELE 363
++ E+L E+LE
Sbjct: 338 IGTPEREALVLREHSSTPPPEELQEQLE 365
>EF472000-1|ABQ96385.1| 1142|Caenorhabditis elegans SMG-3 protein.
Length = 1142
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 457 EDDEGDDGVFHIFDSEKDEVSGQEDNQIDSTGSPCTVRENKDDAQSSTD 603
EDDE D+ DSE DE +ED Q S +E D+ Q D
Sbjct: 928 EDDEEDEDENR--DSELDEDDSEEDRQKIENFSNAVTKEEDDEFQRELD 974
>AC084197-22|AAK68590.2| 1142|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 3 protein.
Length = 1142
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 457 EDDEGDDGVFHIFDSEKDEVSGQEDNQIDSTGSPCTVRENKDDAQSSTD 603
EDDE D+ DSE DE +ED Q S +E D+ Q D
Sbjct: 928 EDDEEDEDENR--DSELDEDDSEEDRQKIENFSNAVTKEEDDEFQRELD 974
>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical
protein F16B12.6 protein.
Length = 1392
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 406 DVHAPQHVEEVHHISYNEDDEGDDGVFHIFDSEKDEVSGQEDNQIDS 546
D+H+ VE+ SY+ DDG+ + D K+ + QED+Q+++
Sbjct: 666 DMHSHMMVEQD---SYDMIPVDDDGIVDVVDVHKEMLVQQEDDQMEN 709
>Z81495-7|CAB04060.1| 444|Caenorhabditis elegans Hypothetical
protein F08G2.7 protein.
Length = 444
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 445 ISYNEDDEGDDGVFHIFDSEKDEVSGQEDNQIDST---GSPCTVRENKDDAQSS 597
IS + FH D ++DE D +I+S GS T++ +++ A+ S
Sbjct: 356 ISQQNPQQSSSSFFHDDDEDQDETKNFRDEEIESPRCHGSTSTLKNDEEAAELS 409
>Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical
protein F28C6.6 protein.
Length = 735
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 178 LRVKKREEKIWDEFVKEQDIVHSVCEDDPYQF 273
L+V+KR + ++E K+Q + HS+ D Y+F
Sbjct: 490 LKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKF 521
>U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 178 LRVKKREEKIWDEFVKEQDIVHSVCEDDPYQF 273
L+V+KR + ++E K+Q + HS+ D Y+F
Sbjct: 485 LKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKF 516
>U10438-4|AAA19085.2| 344|Caenorhabditis elegans Hypothetical
protein B0280.7 protein.
Length = 344
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3
Query: 460 LHCN*YGELLLRVVERA 410
LHCN YG L +VVERA
Sbjct: 126 LHCNLYGGALKKVVERA 142
>L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage
stimulation factor protein.
Length = 735
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 178 LRVKKREEKIWDEFVKEQDIVHSVCEDDPYQF 273
L+V+KR + ++E K+Q + HS+ D Y+F
Sbjct: 490 LKVEKRRKTAYEEAQKDQTMNHSMLVIDRYKF 521
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 27.9 bits (59), Expect = 6.3
Identities = 7/30 (23%), Positives = 25/30 (83%)
Frame = +1
Query: 145 ELERTWKSTRRLRVKKREEKIWDEFVKEQD 234
ELE+ K+ ++++++++EEK++++ + +++
Sbjct: 418 ELEKLVKNGKKVKIEEKEEKVYEDLIDKRN 447
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 27.9 bits (59), Expect = 6.3
Identities = 7/30 (23%), Positives = 25/30 (83%)
Frame = +1
Query: 145 ELERTWKSTRRLRVKKREEKIWDEFVKEQD 234
ELE+ K+ ++++++++EEK++++ + +++
Sbjct: 418 ELEKLVKNGKKVKIEEKEEKVYEDLIDKRN 447
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 27.9 bits (59), Expect = 6.3
Identities = 7/30 (23%), Positives = 25/30 (83%)
Frame = +1
Query: 145 ELERTWKSTRRLRVKKREEKIWDEFVKEQD 234
ELE+ K+ ++++++++EEK++++ + +++
Sbjct: 418 ELEKLVKNGKKVKIEEKEEKVYEDLIDKRN 447
>Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical
protein R11D1.1b protein.
Length = 622
Score = 27.5 bits (58), Expect = 8.3
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 322 LQKMKNEQLLEELEAFQSDDAQQYMVEDDVHAPQHVEEVHHISYNEDDEGDDGV-FHIFD 498
LQ+ E L LE + D + ++E+ + + E S +EDD GDDG D
Sbjct: 516 LQRAGEEHLARMLE--EHDGVENDLLEELFNMRRRFREE---SSDEDDSGDDGENGDEND 570
Query: 499 SEKDEVSGQEDNQIDSTGS 555
+E D + N S S
Sbjct: 571 NENDNIESSSSNSDSSDAS 589
>Z75547-1|CAA99908.2| 621|Caenorhabditis elegans Hypothetical
protein R11D1.1a protein.
Length = 621
Score = 27.5 bits (58), Expect = 8.3
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 322 LQKMKNEQLLEELEAFQSDDAQQYMVEDDVHAPQHVEEVHHISYNEDDEGDDGV-FHIFD 498
LQ+ E L LE + D + ++E+ + + E S +EDD GDDG D
Sbjct: 515 LQRAGEEHLARMLE--EHDGVENDLLEELFNMRRRFREE---SSDEDDSGDDGENGDEND 569
Query: 499 SEKDEVSGQEDNQIDSTGS 555
+E D + N S S
Sbjct: 570 NENDNIESSSSNSDSSDAS 588
>Z46242-9|CAA86334.2| 491|Caenorhabditis elegans Hypothetical
protein F35G12.12 protein.
Length = 491
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 316 SELQKMKNEQLLEELEAFQSDDAQQYMVEDDVHA 417
+E K ++LE+L Q + AQQ EDDV A
Sbjct: 20 AERSSKKGWEILEKLAKMQIEAAQQMETEDDVAA 53
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 469 GDDGVFHIFDSEKDEVSG--QEDNQIDSTGSPCTVRENKDDAQSSTDSPE 612
G+DG +KDE D+ D T P V + +D +TD PE
Sbjct: 32 GEDGEIMEITEQKDESDDVVMLDDDDDDTPEPILVIDMDEDEDVTTDGPE 81
>AY204168-1|AAO39172.1| 395|Caenorhabditis elegans nuclear receptor
NHR-10 protein.
Length = 395
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +1
Query: 94 FMPEDNAANELKYIEGEELERTWKSTRRLRVKKREEKIWDEFVK 225
F P D+ + + + +G +RT + TR L K++ ++ D+ +K
Sbjct: 242 FNPPDHGLDTIVFPDGAYFDRTPEPTRPLGFNKKKYQMLDQLLK 285
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 469 GDDGVFHIFDSEKDEVSG--QEDNQIDSTGSPCTVRENKDDAQSSTDSPE 612
G+DG +KDE D+ D T P V + +D +TD PE
Sbjct: 32 GEDGEIMEITEQKDESDDVVMLDDDDDDTPEPILVIDMDEDEDVTTDGPE 81
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 469 GDDGVFHIFDSEKDEVSG--QEDNQIDSTGSPCTVRENKDDAQSSTDSPE 612
G+DG +KDE D+ D T P V + +D +TD PE
Sbjct: 32 GEDGEIMEITEQKDESDDVVMLDDDDDDTPEPILVIDMDEDEDVTTDGPE 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.134 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,016,006
Number of Sequences: 27780
Number of extensions: 226165
Number of successful extensions: 1226
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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