Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6k19
         (640 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1130 - 27826384-27827039,27827800-27828031,27828120-278284...    29   3.1  
12_02_1085 - 25935688-25935948,25936589-25936657,25937244-259373...    29   4.1  
10_01_0330 + 3614562-3614574,3614676-3615118,3617700-3617825,361...    27   9.5  
09_02_0348 - 7616686-7616802,7616888-7617176,7617259-7617429,761...    27   9.5  
01_01_0393 + 3025813-3026399,3026493-3027081                           27   9.5  

>06_03_1130 - 27826384-27827039,27827800-27828031,27828120-27828491,
            27829243-27829449,27829611-27829704,27829806-27829870,
            27829946-27830398,27830467-27830760,27830837-27831295,
            27831367-27831588,27831755-27831968,27832039-27832494,
            27833280-27833389,27833468-27833644,27833758-27833979,
            27834048-27834167,27834274-27834383,27834552-27834607,
            27835252-27835440,27835602-27835775,27836066-27836281,
            27837066-27837106,27837971-27837986,27838330-27838415,
            27838737-27838910,27839093-27839149,27839720-27840064,
            27840175-27840216,27840377-27840496,27840575-27840724,
            27840830-27841534,27841609-27841954,27842978-27843080,
            27844817-27844860,27845905-27846101,27846322-27846344,
            27846802-27847122,27847406-27847579,27847843-27848047,
            27848817-27848880,27850097-27850278,27850291-27850350,
            27850688-27850748,27851249-27851313,27851491-27851569,
            27851656-27852021,27852442-27852790,27852887-27852989,
            27853103-27853373,27854296-27854405,27854515-27854652
          Length = 3364

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +2

Query: 380  TAPLKMLISAPATVNVLHLRATHRFLRALIFYCQYYLQTSDEMSKR 517
            T+P+K+++     +N+  L + +RF   ++     YLQ+  + S R
Sbjct: 1887 TSPIKVILPTSCHINISFLPSYYRFTSVILVCIFRYLQSCQDSSAR 1932


>12_02_1085 -
           25935688-25935948,25936589-25936657,25937244-25937315,
           25937693-25937791,25937927-25938007,25938099-25938586,
           25938728-25938857,25939994-25940239
          Length = 481

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
 Frame = +2

Query: 74  PRFIYKMIGA-------YSSNYDNDENFESLFEDGHWEWDENVMQLVFTSDRPRRESSY 229
           P F+  M+GA       YSS Y    N E + ED    W +  +     SD P+R  S+
Sbjct: 406 PSFMVNMVGADRMSQRSYSSRYPFSLNAEMIPEDEFELWLQQALASGVFSDSPKRRKSW 464


>10_01_0330 +
           3614562-3614574,3614676-3615118,3617700-3617825,
           3618379-3618786,3618871-3619311,3619399-3619779
          Length = 603

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 473 YCQYYLQTSDEMSKRSLELEAKIRTHRSDEIERIFQINLEDLR 601
           Y   Y + +   +++   LEAKIR     E+   F  NLE +R
Sbjct: 380 YAWQYKKWTSNKAEKDARLEAKIRASIRAELTSEFDENLESMR 422


>09_02_0348 -
           7616686-7616802,7616888-7617176,7617259-7617429,
           7617508-7617680,7617789-7618394,7618482-7618793,
           7619007-7619032,7619077-7619191
          Length = 602

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 473 YCQYYLQTSDEMSKRSLELEAKIRTHRSDEIERIFQINLEDLR 601
           Y   Y + + + +K+   LEAKIR     E+   F   LE +R
Sbjct: 54  YAWQYKKRTSKKAKKDARLEAKIRASIRAELTSEFDEKLESMR 96


>01_01_0393 + 3025813-3026399,3026493-3027081
          Length = 391

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 425 VLHLRATHRFLRALIFYCQYYLQTSDE 505
           + H  A+H   R + F C  +L+T DE
Sbjct: 79  ISHSAASHAMARGVFFLCAVHLRTQDE 105


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,396,287
Number of Sequences: 37544
Number of extensions: 206760
Number of successful extensions: 498
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)