BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6k19
(640 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 26 0.88
CR954257-9|CAJ14160.1| 573|Anopheles gambiae putative esterase ... 25 2.0
DQ974174-1|ABJ52814.1| 391|Anopheles gambiae serpin 18 protein. 24 3.5
AY496420-1|AAS80137.1| 447|Anopheles gambiae bacteria responsiv... 23 6.2
AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein. 23 6.2
AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein. 23 6.2
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 8.2
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 26.2 bits (55), Expect = 0.88
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 164 EWDENVMQLVFTSDRPRRESSYESTLQTTFGPVEFKD 274
EW N+ + F D + STL+ TF P E K+
Sbjct: 1342 EWSFNLADVQFERDNHYLKLPASSTLKATFTPTEPKN 1378
>CR954257-9|CAJ14160.1| 573|Anopheles gambiae putative esterase
protein.
Length = 573
Score = 25.0 bits (52), Expect = 2.0
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 26 DTVYLNVFFIYISLFQPRFIYKMIGAYSSNYDNDENF--ESLFED 154
D +YLN++ + +P ++ G YS N N +F E L +D
Sbjct: 114 DCLYLNIYTQQLVGLRPVMVWIHGGGYSINSGNSVDFGPEKLVQD 158
>DQ974174-1|ABJ52814.1| 391|Anopheles gambiae serpin 18 protein.
Length = 391
Score = 24.2 bits (50), Expect = 3.5
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +2
Query: 218 ESSYESTLQTTFGPVEFKDNLDLLDELRFRKLFQRKTVETD 340
E + T QTT PV+ D D+ L +QR E +
Sbjct: 123 ERLFHRTFQTTVEPVDLTD--DIPSALAVNSFYQRANTEIE 161
>AY496420-1|AAS80137.1| 447|Anopheles gambiae bacteria responsive
protein 1 protein.
Length = 447
Score = 23.4 bits (48), Expect = 6.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 261 TGPKVVCKVDS*EDSRRGRSLVNTSCI 181
TGPKV+C D R G V S I
Sbjct: 29 TGPKVLCYYDGSNALREGLGKVTVSDI 55
>AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 23.4 bits (48), Expect = 6.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2
Query: 546 VRIFASNSNERLLISSEVC 490
VRIF SNER+LI+ E C
Sbjct: 182 VRIF---SNERILITQEYC 197
>AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein.
Length = 215
Score = 23.4 bits (48), Expect = 6.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2
Query: 546 VRIFASNSNERLLISSEVC 490
VRIF SNER+LI+ E C
Sbjct: 188 VRIF---SNERILITQEYC 203
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.0 bits (47), Expect = 8.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 420 STFFIYEQHTDSYVL*YSIVNII 488
+T YEQH SYV ++ NII
Sbjct: 3086 NTITCYEQHGLSYVFPHNTSNII 3108
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,292
Number of Sequences: 2352
Number of extensions: 9551
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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