Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6k19
         (640 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    24   1.4  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   1.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   5.8  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   7.6  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   7.6  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   7.6  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -3

Query: 581 FEKFSQFHR-FYVYEFSLPILTNVCSFRQKSVDNIDNRILKHV 456
           F K+    R F++  F L  LTN C    K  D+   R L H+
Sbjct: 372 FSKYDAKKRNFFITMFDLDFLTNAC----KKKDDKPKRRLPHI 410


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 349 CAGY*RFSALHSTFKDAN 402
           C GY + + +H  +KD N
Sbjct: 70  CIGYYKLNKIHDAYKDLN 87


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 38  LNVFFIYISLFQPRFIYKMIGAYSS 112
           + + F+Y+  + P  +  MIGA+ +
Sbjct: 277 ITICFLYVLSWTPYGVMSMIGAFGN 301


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 156 GIGNGMKMLCSSCSQVIAR 212
           G+  G ++L  SCS  IAR
Sbjct: 423 GVLMGQRLLTMSCSDKIAR 441


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 473 YCQYYLQTSDEMSKRSLELEAKIRTHRSDEIERIF 577
           +C+ ++Q   +   RS   +   R+ R D I RIF
Sbjct: 388 HCELHMQPRKKNCCRSWLSKFPTRSKRIDVISRIF 422


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 473 YCQYYLQTSDEMSKRSLELEAKIRTHRSDEIERIF 577
           +C+ ++Q   +   RS   +   R+ R D I RIF
Sbjct: 388 HCELHMQPRKKNCCRSWLSKFPTRSKRIDVISRIF 422


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,273
Number of Sequences: 438
Number of extensions: 2303
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)