Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6k16
         (677 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0781 + 23105554-23106855,23107191-23107511,23107581-231076...    30   2.0  
02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,290...    28   7.9  

>12_02_0781 +
           23105554-23106855,23107191-23107511,23107581-23107667,
           23107907-23108302,23108327-23108500,23108600-23108764,
           23108857-23109151,23109319-23109446,23109681-23109986,
           23110531-23110591,23110676-23110915,23111251-23111372
          Length = 1198

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 578 N*YINFQFFCFFTWPFHYI 634
           N YIN    CFFTWP  +I
Sbjct: 785 NAYINLGVLCFFTWPILFI 803


>02_01_0399 -
           2905026-2905406,2905522-2905630,2905809-2907475,
           2907650-2907790,2907870-2908043,2908577-2908851,
           2909592-2909755,2910409-2910536,2910628-2910734,
           2911747-2911880,2912266-2912441,2912530-2914257,
           2915084-2915239,2915328-2915486,2915581-2915751,
           2915931-2916047,2916417-2916473,2916565-2916680,
           2916790-2916916,2917862-2917945
          Length = 2056

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -1

Query: 338 GKPKFQNFELE*CSLEVSVCKY 273
           G P F++ E+E C L++S+ +Y
Sbjct: 300 GSPNFESHEVESCDLQLSIAQY 321


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,847,939
Number of Sequences: 37544
Number of extensions: 223265
Number of successful extensions: 343
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)