Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6k15
         (658 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0458 + 3630218-3630274,3630383-3630507,3630635-3630710,363...    32   0.35 
01_01_0406 + 3059996-3060047,3060804-3060867,3060979-3061054,306...    32   0.35 
08_02_0377 + 16481232-16481361,16482501-16482547,16482634-164827...    29   4.3  
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297...    28   7.5  
12_02_0510 + 19846834-19848100,19848114-19848391                       27   9.9  
12_02_0506 - 19794383-19794670,19795066-19795140,19795337-197987...    27   9.9  
01_06_0891 - 32752825-32752932,32753085-32753176,32753293-327534...    27   9.9  

>05_01_0458 +
           3630218-3630274,3630383-3630507,3630635-3630710,
           3630884-3630985,3631075-3631290,3632217-3632297,
           3633152-3633235,3633405-3633509,3634338-3634516,
           3634681-3634765,3634889-3635090,3635165-3635234,
           3635353-3635422,3635745-3635834,3636020-3636088,
           3636520-3636618,3636804-3636914
          Length = 606

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +3

Query: 486 ILEELKNLFEVAITNAYPDLENPPIALTLSGNNPKFGDYXCNSAMAIAQLLKAN 647
           + ++L  L   ++    P++E  P+    +    KFGDY CN+AM +   +K +
Sbjct: 24  VKQQLSKLVIASLRTTVPEVEVDPMVEVCTA---KFGDYQCNNAMGLWSRIKGS 74


>01_01_0406 +
           3059996-3060047,3060804-3060867,3060979-3061054,
           3061142-3061243,3061327-3061542,3061615-3061695,
           3062219-3062287,3062789-3062961,3063098-3063182,
           3063290-3063491,3063577-3063646,3063956-3064025,
           3064138-3064227,3064321-3064389,3064566-3064664,
           3064814-3064924
          Length = 542

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +3

Query: 516 VAITNAYPDLENPPIALTLSGNNPKFGDYXCNSAMAIAQLLKAN 647
           V+     PDL+  P+   L  + P FGDY CN+AM++   ++ +
Sbjct: 12  VSALRLVPDLDVEPM---LEVSKPGFGDYQCNNAMSVFSRIRGS 52


>08_02_0377 +
           16481232-16481361,16482501-16482547,16482634-16482711,
           16482826-16482896,16483005-16483086
          Length = 135

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
 Frame = +3

Query: 291 DLSYVGNPELDKLLTENEKLKHRLAILENAIKVETXXXXXXXXXXXXRTLPMLVT--DTK 464
           DLS    PELDK   + EK K +L  LE    +E             + L  L +  D  
Sbjct: 6   DLSQYIGPELDKKKAKLEKAKSKLLELEKKADIE-ENTRVTAVESVMQALVFLDSEHDVN 64

Query: 465 SVESNFCILEELKNLFEVAITNAYPDLENPPIALTLSGNNPK 590
            + S++C + E+     +      P L + P+ +  S N P+
Sbjct: 65  MIVSDYC-MPEMTGYDLLMEVKKSPRLVHLPVIIASSDNIPE 105


>05_06_0240 -
           26629218-26629323,26629412-26629490,26629656-26629761,
           26629844-26629947,26630069-26630168,26630256-26630351,
           26630464-26630541,26630603-26630671,26630766-26630846,
           26630879-26630935,26631016-26631105,26631192-26631278,
           26631690-26631794,26631899-26631994,26632222-26632397,
           26632847-26633006,26633151-26633600
          Length = 679

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 315 ELDKLLTENEKLKHRLAILENAIK 386
           ELDK++T NE  K  + I++NA+K
Sbjct: 560 ELDKIITANEDEKIGVQIIKNALK 583


>12_02_0510 + 19846834-19848100,19848114-19848391
          Length = 514

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 294 LSYVGNPELDKLLTENEKLKHRL 362
           +SYV N  LD+L  ENE LK +L
Sbjct: 26  ISYVVNKALDRLPLENEDLKTKL 48


>12_02_0506 -
           19794383-19794670,19795066-19795140,19795337-19798704,
           19799503-19799671,19799758-19799850
          Length = 1330

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 294 LSYVGNPELDKLLTENEKLKHRL 362
           +SYV N  LD+L  ENE LK +L
Sbjct: 117 ISYVVNKALDRLPLENEDLKTKL 139


>01_06_0891 -
           32752825-32752932,32753085-32753176,32753293-32753408,
           32754055-32755969,32756037-32756171,32756549-32756870
          Length = 895

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +1

Query: 19  SSKTSENKPNHKKSIKKVANNQPTETYASNNNK*TRIN**KSQNTSAKTVNYSC 180
           +SK S+N+    K       N+P+ET AS   K  R++  +  NTSA  V  +C
Sbjct: 585 TSKGSDNETTSSKCAAPQDENKPSETMASIFAK--RLDALRHANTSAVHVAITC 636


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,428,828
Number of Sequences: 37544
Number of extensions: 221662
Number of successful extensions: 473
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)