Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6k15
         (658 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12964-14|AAU05575.1|  692|Caenorhabditis elegans Arginyl aa-trn...    54   9e-08
U12964-13|AAA91224.2|  713|Caenorhabditis elegans Arginyl aa-trn...    54   9e-08
Z78018-4|CAB01448.1|  522|Caenorhabditis elegans Hypothetical pr...    35   0.044
Z81054-2|CAB02880.3|  223|Caenorhabditis elegans Hypothetical pr...    31   0.72 
AC006610-3|AAK85449.1|  264|Caenorhabditis elegans Hypothetical ...    29   2.9  
AC006804-5|AAF60754.1|  213|Caenorhabditis elegans Hypothetical ...    28   5.1  
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p...    27   8.9  
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>U12964-14|AAU05575.1|  692|Caenorhabditis elegans Arginyl aa-trna
           synthetase protein1, isoform b protein.
          Length = 692

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 28/56 (50%), Positives = 36/56 (64%)
 Frame = +3

Query: 486 ILEELKNLFEVAITNAYPDLENPPIALTLSGNNPKFGDYXCNSAMAIAQLLKANNV 653
           I   L++LF+ AI +A+P L+ P   L     NP+FGDY CNSAM IA  LKAN +
Sbjct: 129 IFGRLQSLFKKAIEDAFPGLDVP--LLLAETPNPQFGDYQCNSAMPIAAKLKANKI 182


>U12964-13|AAA91224.2|  713|Caenorhabditis elegans Arginyl aa-trna
           synthetase protein1, isoform a protein.
          Length = 713

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 28/56 (50%), Positives = 36/56 (64%)
 Frame = +3

Query: 486 ILEELKNLFEVAITNAYPDLENPPIALTLSGNNPKFGDYXCNSAMAIAQLLKANNV 653
           I   L++LF+ AI +A+P L+ P   L     NP+FGDY CNSAM IA  LKAN +
Sbjct: 129 IFGRLQSLFKKAIEDAFPGLDVP--LLLAETPNPQFGDYQCNSAMPIAAKLKANKI 182


>Z78018-4|CAB01448.1|  522|Caenorhabditis elegans Hypothetical
           protein W07G4.4 protein.
          Length = 522

 Score = 35.1 bits (77), Expect = 0.044
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -1

Query: 490 NMQKLLSTDLVSVTSIGNVRFLASFLIAAEDSVSTFMAFSRIA 362
           ++Q LLST +V  TSI +  F A  L+ ++D+V  F A  +++
Sbjct: 2   SLQSLLSTKIVRATSIADAAFDAVVLVGSQDNVQQFGAIQQVS 44


>Z81054-2|CAB02880.3|  223|Caenorhabditis elegans Hypothetical
           protein F01D4.5a protein.
          Length = 223

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +1

Query: 13  LESSKTSENK--PNHKKSIKKVANNQPTETYASNNNK*TRIN 132
           LES+  S +K  P  ++ +KK   N+  E Y  N N  T+IN
Sbjct: 6   LESTSNSVHKSPPKKRRRVKKKKRNEEDEEYEENKNMATQIN 47


>AC006610-3|AAK85449.1|  264|Caenorhabditis elegans Hypothetical
           protein C30F12.3 protein.
          Length = 264

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = -3

Query: 167 TVLALVFCDFYQFIRVHLLLLEAYVSVGWLFATFLIDFLWFGLFSE 30
           TVL  +F    +F+  +LLL  A +++G +   F + F++ GLF +
Sbjct: 110 TVLWAIFAQRAEFLVPYLLLQGAGLAIGLI---FFVSFMYIGLFGD 152


>AC006804-5|AAF60754.1|  213|Caenorhabditis elegans Hypothetical
           protein Y53G8B.1 protein.
          Length = 213

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 510 FEVAITNAYPDLENPPIALTLSGNNPKFGDYXC 608
           F +A +N  P L+N PI L L+   P +GD+ C
Sbjct: 100 FHIA-SNIQP-LQNKPIYLMLNEKEPGYGDFWC 130


>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
           protein F02E9.4b protein.
          Length = 1507

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +2

Query: 29  LQKINRTIKNLLKRWQITNQLKHMLPIIINELV*IDKNHKTLVLKL*TIVATYKND 196
           L+K  R +   LK     NQL H++ ++IN    +D   + L+ +L  I+ T  +D
Sbjct: 687 LKKSYRILYERLKSRTTPNQLSHLM-VLINAYANLDITREQLISELPKIMGTSGSD 741


>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
           protein F02E9.4a protein.
          Length = 1505

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +2

Query: 29  LQKINRTIKNLLKRWQITNQLKHMLPIIINELV*IDKNHKTLVLKL*TIVATYKND 196
           L+K  R +   LK     NQL H++ ++IN    +D   + L+ +L  I+ T  +D
Sbjct: 687 LKKSYRILYERLKSRTTPNQLSHLM-VLINAYANLDITREQLISELPKIMGTSGSD 741


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,175,691
Number of Sequences: 27780
Number of extensions: 214476
Number of successful extensions: 642
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)