Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6k11
         (709 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0342 + 2451314-2451345,2451536-2451730,2452548-2452587           29   2.7  
04_04_1193 + 31634043-31634349,31634685-31634847,31635048-316366...    28   6.3  

>02_01_0342 + 2451314-2451345,2451536-2451730,2452548-2452587
          Length = 88

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 9/33 (27%), Positives = 22/33 (66%)
 Frame = -2

Query: 705 KHKILLKIRNIIFYQYFLTSSLYTSICDLVLTF 607
           ++K  LK+ +++F+QY     ++++ C  ++TF
Sbjct: 11  RYKYHLKVLHVLFFQYMHRLEIFSNFCSSLVTF 43


>04_04_1193 + 31634043-31634349,31634685-31634847,31635048-31636622,
            31636653-31637541,31639401-31641266
          Length = 1599

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -3

Query: 455  HGRWVNL--KHRFSLRDFGMRSCWTQDGIIVIKTTNGTRHKVTAMEELS 315
            +G+W++L  +H   L+   + SCW   G+ + +  NG  + ++A E  S
Sbjct: 1147 NGKWLSLMLQHAEVLQKLSITSCWQIRGLSIGEEENGHPNLMSATEASS 1195


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,230,433
Number of Sequences: 37544
Number of extensions: 331838
Number of successful extensions: 718
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)