Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6k07
         (731 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   1.4  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    25   3.2  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    24   5.6  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   5.6  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    23   9.7  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   9.7  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 271 RAMYSRTATMQSHCYFEH 218
           RA Y+R+  +++HC F+H
Sbjct: 530 RATYTRSDNLRTHCKFKH 547


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -3

Query: 387 YLQKTSYFLNVTTFV 343
           Y Q TSYFL +T FV
Sbjct: 134 YFQLTSYFLYITIFV 148


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -1

Query: 101 KLRTLLKEYTLFPFSF-NEHFARTVFWFRLAAFS 3
           K+R LL  +      F  EH A ++FW+    FS
Sbjct: 38  KVRKLLPHHVEARIRFAEEHLAASIFWWSKIIFS 71


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +1

Query: 496 SNYIRLYINLKTISTCSSYLLGRHRV*TMVGTDSNVNMDRQNASG 630
           ++YI   + +K     S +  GR  +   +  + N+N+DR  A G
Sbjct: 846 NDYIGSLVQVKNALVSSDHHHGRSTMSAGMPLNLNLNLDRSEAGG 890


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 83  LIVSLICYLLYLIHPYWIL 139
           ++V+  C  ++L  PYWI+
Sbjct: 311 MLVNFDCSAMWLKEPYWIV 329


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 83  LIVSLICYLLYLIHPYWIL 139
           ++V+  C  ++L  PYWI+
Sbjct: 342 MLVNFDCSAMWLKEPYWIV 360


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,526
Number of Sequences: 2352
Number of extensions: 16725
Number of successful extensions: 53
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)