Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6k02
         (533 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.24 
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   5.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.8  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   9.0  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 25.8 bits (54), Expect = 0.24
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 396  SDSDMTASPRSTSGATTPELSVPLIRS-FHQLSLNST 289
            + SD + +PRST+G   P  S+  + S F  LS N+T
Sbjct: 938  ASSDRSGTPRSTNGDRKPGGSLGALSSMFDSLSGNNT 974


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +3

Query: 360 LYYAATLSCHCRSFTFTDYSNIFSFCYSVKTTELPAIG 473
           +YY +    HC   + +  +  +  C+S ++T L + G
Sbjct: 85  VYYESRAHIHCSVKSESSQAAKYGGCFSGESTVLTSTG 122


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 471 LLQVAQSSLQSNKMKKYCY 415
           LL+  +S  +  K K+YCY
Sbjct: 97  LLKNLESCAKIKKTKRYCY 115


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 374 DAVMSLSEFYVHRL*QYF 427
           D ++ +S F +HR  QYF
Sbjct: 373 DTMVMISMFAIHRDPQYF 390


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,237
Number of Sequences: 336
Number of extensions: 1844
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)