Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6k01
(691 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8TEM4 Cluster: FLJ00169 protein; n=36; Amniota|Rep: FL... 35 1.6
UniRef50_P32770 Cluster: Asparagine-rich protein; n=2; Saccharom... 35 1.6
UniRef50_Q7RC59 Cluster: Putative uncharacterized protein PY0592... 35 2.2
UniRef50_Q550Q7 Cluster: Putative uncharacterized protein; n=2; ... 33 5.0
UniRef50_Q23RB9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_Q5U2M8 Cluster: Mediator of DNA damage checkpoint prote... 33 6.6
UniRef50_Q01G27 Cluster: Chromosome 01 contig 1, DNA sequence; n... 33 8.7
>UniRef50_Q8TEM4 Cluster: FLJ00169 protein; n=36; Amniota|Rep:
FLJ00169 protein - Homo sapiens (Human)
Length = 432
Score = 35.1 bits (77), Expect = 1.6
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = +1
Query: 256 KPLLLDLEIQKKIPSQRQVSQRVLVSIKPRAPPIKTLYITEKSRFHCKKRTDKSGSRLAI 435
KPL + +P+ Q R S P P + ITE+S+ ++RT S S +
Sbjct: 220 KPLRKRSPCSRSVPAPGQSRGRRFTSSPPGLPASPSPCITERSKQKARRRTRSSSSSSSS 279
Query: 436 GDHSSFTSDLSQSDVHVTGLSKNHENSKFYKDR 534
SS +S S S G K + YKD+
Sbjct: 280 SSSSSSSSSSSSSSSSSDGRKKRGK----YKDK 308
>UniRef50_P32770 Cluster: Asparagine-rich protein; n=2;
Saccharomyces cerevisiae|Rep: Asparagine-rich protein -
Saccharomyces cerevisiae (Baker's yeast)
Length = 719
Score = 35.1 bits (77), Expect = 1.6
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +1
Query: 415 SGSRLAIGDHSSFTSDLSQSDVHVTGLSKNHEN-SKFYKDRXXXXXXXXXXXXRNLKNGN 591
SGS + I DH S ++++ + + ++ N+ N + +R N N N
Sbjct: 467 SGSPIIIADHFSGNNNIAPNYRYNNNINNNNNNINNMTNNRYNINNNINGNGNGNGNNSN 526
Query: 592 SECKVRDLNNNSHEKCFIFTNIGLNMNDNSTN 687
+ + +NN+H I +N N N+N+ N
Sbjct: 527 NNNNHNNNHNNNHHNGSINSNSNTNNNNNNNN 558
>UniRef50_Q7RC59 Cluster: Putative uncharacterized protein PY05925;
n=10; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05925 - Plasmodium yoelii yoelii
Length = 1985
Score = 34.7 bits (76), Expect = 2.2
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 574 NLKNGNSECKVRDLNNNSHEKCFIFTNIGLN-MNDNSTNV 690
N N N + KV L NN++ F+ TNI N NDN+T +
Sbjct: 1718 NTSNKNMDRKVHTLKNNTNSTNFVTTNINTNHNNDNNTKI 1757
>UniRef50_Q550Q7 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 235
Score = 33.5 bits (73), Expect = 5.0
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 10/183 (5%)
Frame = +1
Query: 160 LTSKKLLSIHEERLIREFDYGLTAHSSSRPLTKPLLLDLEIQKKIPSQRQVSQR-VLVSI 336
+ +K LL + + + + GLT S S L P + K P+ ++ + VL +
Sbjct: 2 IVNKDLLELEKNSNKTKINNGLTEPSVSPFLITPQ----QAPKTKPNFFKMEESSVLNRV 57
Query: 337 KPRAPPIKTLYITEKSRFHCKKRTD----KSGSR-----LAIGDHSSFTSDLSQSDVHVT 489
K P +K I K + K+ + K G LA+G +LS++++ +T
Sbjct: 58 KDFLPKLKEANIDLKKKIENKEDVNIENIKEGDEYIQMNLALGI-LEHKEELSENNIKIT 116
Query: 490 GLSKNHENSKFYKDRXXXXXXXXXXXXRNLKNGNSECKVRDLNNNSHEKCFIFTNIGLNM 669
+KN+ N+ + N N N++ K R NN+++ C N N
Sbjct: 117 SNNKNNNNNN--NNNTNTPILEINKENENENNNNNDNKKRKQPNNANKTCTDNNNKNNNK 174
Query: 670 NDN 678
N+N
Sbjct: 175 NNN 177
>UniRef50_Q23RB9 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 6052
Score = 33.5 bits (73), Expect = 5.0
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 175 LLSIHEERLIREFDYGLTAHSSSRPLTKPLLLDLEIQK-KIPSQRQVSQ 318
++ IH++ + + D +T S +PL KP +++ ++QK K +QRQ +Q
Sbjct: 998 VVKIHDQSVQTDQDDQVTPRQSQKPLNKPEIIERDLQKEKNLNQRQTNQ 1046
>UniRef50_Q5U2M8 Cluster: Mediator of DNA damage checkpoint protein 1;
n=4; Rattus norvegicus|Rep: Mediator of DNA damage
checkpoint protein 1 - Rattus norvegicus (Rat)
Length = 1279
Score = 33.1 bits (72), Expect = 6.6
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 229 AHSSSRPLTKPLLLDLEIQKKIPSQRQVSQRVLVSIKPRAPPIKTLYITEKSRFHCKKRT 408
AHS+S + +P+L E Q +++ V+ ++ PRA P+ + + S ++ T
Sbjct: 923 AHSTSVNMPEPVLTGPEAQPLTSAEQSVTS----NLNPRAQPLTLEPVPQTSHQRRRRAT 978
Query: 409 DKSGSRLA-IGDHSSFT 456
K GSR A +G S T
Sbjct: 979 GKQGSRTAPVGPKSYST 995
>UniRef50_Q01G27 Cluster: Chromosome 01 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 01 contig 1, DNA
sequence - Ostreococcus tauri
Length = 285
Score = 32.7 bits (71), Expect = 8.7
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +1
Query: 211 FDYGLTAHSSSRPLTKPLLLDLEIQKKIPSQRQVSQRVLVSIKPRAPPI 357
F +G T + +PL K L+ + KK +++ + ++ L+S KP+A P+
Sbjct: 77 FSFGTTKPTVKKPLVKKPLVKKPMAKKPMAKKPMVKKPLLSTKPKAKPM 125
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,551,506
Number of Sequences: 1657284
Number of extensions: 12623100
Number of successful extensions: 39266
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38073
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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