Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6k01
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   1.8  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   9.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.5  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 295 PSQRQVSQRVLVSIKPRAPPIKTL 366
           PS +  ++ V+V+  P+APP  T+
Sbjct: 181 PSTKPTNKPVVVTKPPQAPPFATV 204


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -2

Query: 348 RPWFDRYQ 325
           RPW++RYQ
Sbjct: 72  RPWWERYQ 79


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 23  CNTYFCFCSQHKIVCNILNEL 85
           CN Y  FC+++      LN+L
Sbjct: 542 CNFYRKFCARYSAATQDLNKL 562


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -2

Query: 348 RPWFDRYQ 325
           RPW++RYQ
Sbjct: 73  RPWWERYQ 80


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -2

Query: 348 RPWFDRYQ 325
           RPW++RYQ
Sbjct: 73  RPWWERYQ 80


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 139 FIFVFPCIFAKFTRLY 92
           ++FV   +F+KF +LY
Sbjct: 218 YVFVVIDVFSKFLKLY 233


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -3

Query: 155 LFSITFYFRLSLHICEIH 102
           ++ I ++     HICE+H
Sbjct: 103 VYKIGYWLHQICHICELH 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,612
Number of Sequences: 336
Number of extensions: 3356
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)