Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6k01
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AF025450-7|AAN63434.2|  170|Caenorhabditis elegans Hypothetical ...    29   2.4  
AL110478-10|CAE17956.3|  758|Caenorhabditis elegans Hypothetical...    29   4.1  
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AL110478-6|CAE17957.2|  952|Caenorhabditis elegans Hypothetical ...    27   9.6  
AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical ...    27   9.6  

>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
           protein F41H10.3b protein.
          Length = 1005

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +1

Query: 289 KIPSQRQVSQRVLVSIKPRAPPI--KTLYITEK 381
           K+ +  + + RVL SIKP+ PPI  KT+Y  +K
Sbjct: 758 KVKTIAKTTARVLYSIKPQIPPIANKTVYPVKK 790


>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
           protein F41H10.3a protein.
          Length = 1140

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +1

Query: 289 KIPSQRQVSQRVLVSIKPRAPPI--KTLYITEK 381
           K+ +  + + RVL SIKP+ PPI  KT+Y  +K
Sbjct: 758 KVKTIAKTTARVLYSIKPQIPPIANKTVYPVKK 790


>AF025450-7|AAN63434.2|  170|Caenorhabditis elegans Hypothetical
           protein C41H7.2 protein.
          Length = 170

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -2

Query: 177 QLFRGKLLIFHYILFSSFPAYLRNSRVSMIVSSFKILQTILC*LQK 40
           Q FR ++L F +   + FP +L + ++   V + KI   I C  +K
Sbjct: 52  QQFRAQVLSFKFPQLTQFPQFLESLQMKTSVQTLKIFIIIFCNTRK 97


>AL110478-10|CAE17956.3|  758|Caenorhabditis elegans Hypothetical
           protein Y26D4A.13 protein.
          Length = 758

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = +2

Query: 284 KRKFRVNVKSLKEYWYLSNHGRHLLKHCISPRKAVFTVKNEQINPVQ 424
           K K  +++  +K+ + L    + LLKHC  P + +  +K ++IN ++
Sbjct: 482 KNKSNISIIKVKDVYCLKQDEK-LLKHCNPPDRFILRMKVDRINLIK 527


>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
           protein K02B12.5 protein.
          Length = 1204

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 21/75 (28%), Positives = 33/75 (44%)
 Frame = +1

Query: 121 RERRK*NVMENKQLTSKKLLSIHEERLIREFDYGLTAHSSSRPLTKPLLLDLEIQKKIPS 300
           R+RR  N  +N   TSK+     E           TAHS+ + L +P L+  +  ++  S
Sbjct: 714 RKRRNSNNSDNSSNTSKRKQRSEENIKPPNSTPPTTAHSNRKRLVQPSLITSKRVQRQNS 773

Query: 301 QRQVSQRVLVSIKPR 345
              ++     SI PR
Sbjct: 774 SSSLTSNPRNSISPR 788


>AL110478-6|CAE17957.2|  952|Caenorhabditis elegans Hypothetical
           protein Y26D4A.14 protein.
          Length = 952

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +2

Query: 278 KYKRKFRVNVKSLKEYWYLSNHGRHLLKHCISPRKAVFTVKNE 406
           + KR+   + ++  E+ YL N   +LL+H       +F  +NE
Sbjct: 445 RIKRELYSDFQAAGEFQYLENQSNNLLRHTTEVMCDIFNEQNE 487


>AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical
           protein Y40C7B.1 protein.
          Length = 916

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +2

Query: 278 KYKRKFRVNVKSLKEYWYLSNHGRHLLKHCISPRKAVFTVKNE 406
           + KR+   + ++  E+ YL N   +LL+H       +F  +NE
Sbjct: 444 RIKRELYSDFQAAGEFQYLENQSNNLLRHTTEVMCDIFNEQNE 486


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,192,837
Number of Sequences: 27780
Number of extensions: 316497
Number of successful extensions: 848
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)