Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6j23
(252 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA bind... 94 8e-20
D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein. 94 8e-20
CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein. 94 8e-20
BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear r... 94 8e-20
BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear r... 94 8e-20
BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein. 94 8e-20
AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor pro... 94 8e-20
AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein. 94 8e-20
AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein. 94 8e-20
AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein. 94 8e-20
AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein. 94 8e-20
AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein. 94 8e-20
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 92 3e-19
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 92 3e-19
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 92 3e-19
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 92 3e-19
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 92 3e-19
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 92 3e-19
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 92 3e-19
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 92 3e-19
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 92 3e-19
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 92 3e-19
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 92 3e-19
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 92 3e-19
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 92 3e-19
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 92 3e-19
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 92 3e-19
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 92 3e-19
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 92 3e-19
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 92 3e-19
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 92 3e-19
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 92 3e-19
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 92 3e-19
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 87 1e-17
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 87 1e-17
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 70 2e-12
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 70 2e-12
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 66 1e-11
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 66 1e-11
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 66 3e-11
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 66 3e-11
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 65 3e-11
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 65 3e-11
BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear r... 65 3e-11
BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein. 65 3e-11
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 65 3e-11
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 65 3e-11
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 65 3e-11
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 65 3e-11
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 65 3e-11
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 65 3e-11
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 65 3e-11
BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for IM... 65 3e-11
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 65 3e-11
U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein. 65 4e-11
M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2 ... 65 4e-11
M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein. 65 4e-11
D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein. 65 4e-11
D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein. 65 4e-11
BC000506-1|AAH00506.3| 249|Homo sapiens HNRPA2B1 protein protein. 65 4e-11
BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear r... 64 1e-10
AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA seq... 64 1e-10
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 63 1e-10
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 63 1e-10
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 63 1e-10
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 63 1e-10
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 58 4e-09
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 58 4e-09
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 58 4e-09
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 58 4e-09
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 58 4e-09
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 58 4e-09
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 58 4e-09
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 58 4e-09
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 58 4e-09
U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous ribonucleop... 57 9e-09
CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein. 57 9e-09
BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear r... 57 9e-09
BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear r... 57 9e-09
BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear r... 57 9e-09
BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear r... 57 9e-09
BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear r... 57 9e-09
BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear r... 57 9e-09
BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear r... 57 9e-09
BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear r... 57 9e-09
BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear r... 57 9e-09
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 56 2e-08
AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion pro... 56 2e-08
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 56 2e-08
S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein. 53 1e-07
X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for ... 50 2e-06
AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein. 49 2e-06
AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein. 49 2e-06
AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein. 49 2e-06
X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRN... 48 4e-06
AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein. 46 3e-05
BC017560-1|AAH17560.1| 151|Homo sapiens MSI2 protein protein. 43 2e-04
AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA seq... 43 2e-04
AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens ... 40 0.001
BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like (Drosop... 40 0.002
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 40 0.002
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 40 0.002
AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens ... 40 0.002
AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein. 40 0.002
AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein. 40 0.002
BC047522-1|AAH47522.1| 402|Homo sapiens BRUNOL5 protein protein. 39 0.003
BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA bindi... 39 0.003
AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like f... 39 0.003
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 39 0.003
AB209067-1|BAD92304.1| 421|Homo sapiens bruno-like 5, RNA bindi... 39 0.003
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 38 0.004
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 38 0.004
BC004145-1|AAH04145.2| 291|Homo sapiens TNRC4 protein protein. 38 0.004
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 38 0.004
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 38 0.004
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 38 0.004
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 38 0.004
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 38 0.004
BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein. 38 0.006
AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein BRU... 38 0.006
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 36 0.018
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 36 0.018
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 36 0.018
U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 36 0.018
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 36 0.018
BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 36 0.018
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 36 0.018
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 36 0.018
AL136097-15|CAI16208.1| 227|Homo sapiens nucleolar protein 8 pr... 36 0.018
AL136097-14|CAI16209.1| 205|Homo sapiens nucleolar protein 8 pr... 36 0.018
AL136097-13|CAC12712.1| 427|Homo sapiens nucleolar protein 8 pr... 36 0.018
AK001049-1|BAA91479.1| 427|Homo sapiens protein ( Homo sapiens ... 36 0.018
AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 36 0.018
AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 36 0.018
AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 36 0.018
AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 36 0.018
AB109030-1|BAC99315.1| 1167|Homo sapiens Nop132 protein. 36 0.018
AB105104-1|BAD12268.1| 1167|Homo sapiens nucleolar protein 8 pro... 36 0.018
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 36 0.024
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 36 0.024
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 36 0.024
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 36 0.024
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 36 0.024
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 36 0.024
AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b, sub... 36 0.024
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 36 0.024
AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b, sub... 36 0.024
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 36 0.024
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 36 0.024
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 36 0.024
AF026564-1|AAC16916.1| 318|Homo sapiens RNA binding protein pro... 36 0.024
U77476-1|AAB84361.1| 295|Homo sapiens DAZLA protein protein. 36 0.031
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 36 0.031
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 36 0.031
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 36 0.031
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 36 0.031
AY675556-1|AAV91783.1| 474|Homo sapiens myocyte enhancer factor... 36 0.031
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 36 0.031
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 36 0.031
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 36 0.031
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 36 0.031
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 36 0.031
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 36 0.031
AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein. 36 0.031
U66726-1|AAB39935.1| 295|Homo sapiens germline specific RNA bin... 35 0.041
U66078-1|AAB63596.1| 295|Homo sapiens DAZLA protein. 35 0.041
U65918-1|AAC50813.1| 295|Homo sapiens RNA binding protein protein. 35 0.041
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 35 0.041
EF055888-1|ABK58591.1| 80|Homo sapiens DAZL protein. 35 0.041
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 35 0.041
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 35 0.041
BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein. 35 0.041
BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein. 35 0.041
BC027595-1|AAH27595.1| 295|Homo sapiens deleted in azoospermia-... 35 0.041
BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for IM... 35 0.041
BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein. 35 0.041
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 35 0.041
AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein. 35 0.041
AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein. 35 0.041
AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein. 35 0.041
AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein... 35 0.041
AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein... 35 0.041
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 35 0.041
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 35 0.041
AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein. 35 0.041
AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein. 35 0.041
AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding, ... 35 0.041
AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein. 35 0.041
AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding, ... 35 0.041
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 35 0.055
BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein. 35 0.055
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 35 0.055
BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein. 35 0.055
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 35 0.055
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 35 0.055
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 35 0.055
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 34 0.072
BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein. 34 0.072
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 34 0.072
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 34 0.072
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 34 0.072
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 34 0.072
AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar t... 34 0.072
AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar t... 34 0.072
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 34 0.072
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 34 0.072
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 34 0.072
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 34 0.072
AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens ... 34 0.072
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 34 0.072
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 34 0.072
BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA bindi... 34 0.096
BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA bindi... 34 0.096
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 33 0.13
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 33 0.13
BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating prote... 33 0.13
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 33 0.13
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 33 0.13
AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens ... 33 0.13
AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein iso... 33 0.13
AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding pro... 33 0.13
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 33 0.13
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 33 0.13
AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein. 33 0.13
U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein. 33 0.17
BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1... 33 0.17
AF141345-1|AAG49448.1| 213|Homo sapiens LYST-interacting protei... 33 0.17
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 33 0.22
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 33 0.22
BX538213-1|CAD98072.1| 729|Homo sapiens hypothetical protein pr... 33 0.22
BC117150-1|AAI17151.1| 729|Homo sapiens cytoplasmic polyadenyla... 33 0.22
BC036899-1|AAH36899.1| 322|Homo sapiens CPEB4 protein protein. 33 0.22
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 33 0.22
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 33 0.22
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 33 0.22
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 33 0.22
AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens ... 33 0.22
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 33 0.22
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 33 0.22
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 33 0.22
AB051460-1|BAB21764.1| 712|Homo sapiens KIAA1673 protein protein. 33 0.22
X75315-1|CAA53064.1| 230|Homo sapiens SEB4B protein. 32 0.29
BC105925-1|AAI05926.1| 562|Homo sapiens CPEB2 protein protein. 32 0.29
BC103942-1|AAI03943.1| 575|Homo sapiens CPEB2 protein protein. 32 0.29
BC103941-1|AAI03942.1| 568|Homo sapiens CPEB2 protein protein. 32 0.29
BC103940-1|AAI03941.1| 589|Homo sapiens cytoplasmic polyadenyla... 32 0.29
BC103939-1|AAI03940.2| 548|Homo sapiens CPEB2 protein protein. 32 0.29
BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. 32 0.29
BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein. 32 0.29
BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein. 32 0.29
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 32 0.29
BC062316-1|AAH62316.1| 957|Homo sapiens RBM15 protein protein. 32 0.29
BC047479-1|AAH47479.1| 959|Homo sapiens RBM15 protein protein. 32 0.29
BC036444-1|AAH36444.1| 697|Homo sapiens cytoplasmic polyadenyla... 32 0.29
BC006397-1|AAH06397.2| 957|Homo sapiens RBM15 protein protein. 32 0.29
AY255519-1|AAP41553.1| 559|Homo sapiens cytoplasmic polyadenyla... 32 0.29
AY247744-1|AAP37585.1| 589|Homo sapiens cytoplasmic polyadenyla... 32 0.29
AL365398-3|CAI14105.1| 684|Homo sapiens cytoplasmic polyadenyla... 32 0.29
AL365398-2|CAI14104.1| 698|Homo sapiens cytoplasmic polyadenyla... 32 0.29
AL355488-1|CAI19077.1| 977|Homo sapiens RNA binding motif prote... 32 0.29
AL158040-5|CAI13637.1| 684|Homo sapiens cytoplasmic polyadenyla... 32 0.29
AL158040-4|CAI13636.1| 698|Homo sapiens cytoplasmic polyadenyla... 32 0.29
AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens ... 32 0.29
AK022541-1|BAB14088.1| 925|Homo sapiens protein ( Homo sapiens ... 32 0.29
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. 32 0.29
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. 32 0.29
AJ297259-2|CAC38862.1| 969|Homo sapiens one twenty two protein ... 32 0.29
AJ297259-1|CAC38861.1| 957|Homo sapiens one twenty two protein ... 32 0.29
AF368064-1|AAK54724.1| 957|Homo sapiens putative RNA-binding mo... 32 0.29
AF368063-1|AAK54723.1| 977|Homo sapiens putative RNA-binding mo... 32 0.29
AF368062-1|AAK54722.1| 969|Homo sapiens putative RNA-binding mo... 32 0.29
AB023157-1|BAA76784.2| 699|Homo sapiens KIAA0940 protein protein. 32 0.29
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 32 0.39
U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein p... 32 0.39
U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein. 32 0.39
U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein. 32 0.39
U30828-1|AAA93071.1| 135|Homo sapiens SRp55-2 protein. 32 0.39
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 32 0.39
CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein. 32 0.39
BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating p... 32 0.39
BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating prote... 32 0.39
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 32 0.39
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 32 0.39
BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating prote... 32 0.39
BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor, argini... 32 0.39
AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor, argini... 32 0.39
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 32 0.39
AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating p... 32 0.39
AK130003-1|BAC85272.1| 307|Homo sapiens protein ( Homo sapiens ... 32 0.39
AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like f... 32 0.39
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 32 0.39
AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA bindi... 32 0.39
AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich sp... 32 0.39
D50912-1|BAA09471.1| 1010|Homo sapiens KIAA0122 protein. 31 0.51
BX537969-1|CAD97933.1| 995|Homo sapiens hypothetical protein pr... 31 0.51
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 31 0.51
BC024153-1|AAH24153.1| 930|Homo sapiens RNA binding motif prote... 31 0.51
BC008733-1|AAH08733.1| 930|Homo sapiens RNA binding motif prote... 31 0.51
BC004181-1|AAH04181.1| 930|Homo sapiens RNA binding motif prote... 31 0.51
BC003089-1|AAH03089.1| 852|Homo sapiens RNA binding motif prote... 31 0.51
BC000681-1|AAH00681.1| 541|Homo sapiens RBM10 protein protein. 31 0.51
AL513366-5|CAI41701.1| 930|Homo sapiens RNA binding motif prote... 31 0.51
AL513366-4|CAI41700.1| 853|Homo sapiens RNA binding motif prote... 31 0.51
X75314-1|CAA53063.1| 229|Homo sapiens SEB4D protein. 31 0.67
U38449-1|AAB49814.1| 33|Homo sapiens RBM protein. 31 0.67
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 31 0.67
BC018711-1|AAH18711.1| 216|Homo sapiens RBM38 protein protein. 31 0.67
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 31 0.67
AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein. 31 0.67
AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA seq... 31 0.67
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 31 0.67
AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens ... 31 0.67
AF432218-1|AAL99924.1| 216|Homo sapiens CLL-associated antigen ... 31 0.67
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 31 0.89
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 31 0.89
DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear r... 31 0.89
BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein. 31 0.89
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 31 0.89
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 31 0.89
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 31 0.89
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 31 0.89
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 31 0.89
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 31 0.89
AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear r... 31 0.89
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 31 0.89
AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding pro... 31 0.89
AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear r... 31 0.89
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 30 1.2
U39402-1|AAC99998.1| 367|Homo sapiens 199G4 protein. 30 1.2
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 30 1.2
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 30 1.2
BC003402-1|AAH03402.1| 420|Homo sapiens RNA binding motif prote... 30 1.2
AK001152-1|BAA91521.1| 420|Homo sapiens protein ( Homo sapiens ... 30 1.2
AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional coactiv... 30 1.2
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 30 1.2
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 30 1.2
X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein. 30 1.6
X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA ... 30 1.6
U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognit... 30 1.6
U13897-1|AAA50599.1| 904|Homo sapiens homolog of Drosophila dis... 30 1.6
BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein. 30 1.6
BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif prote... 30 1.6
U21663-1|AAB02393.1| 366|Homo sapiens DAZ protein protein. 29 2.1
BC114927-1|AAI14928.1| 613|Homo sapiens DAZ1 protein protein. 29 2.1
BC113006-1|AAI13007.1| 534|Homo sapiens deleted in azoospermia ... 29 2.1
BC113005-1|AAI13006.1| 438|Homo sapiens deleted in azoospermia ... 29 2.1
BC047617-1|AAH47617.1| 390|Homo sapiens deleted in azoospermia ... 29 2.1
BC047480-1|AAH47480.1| 390|Homo sapiens deleted in azoospermia ... 29 2.1
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 29 2.1
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 29 2.1
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 29 2.1
AL450998-14|CAH70862.1| 296|Homo sapiens SMART/HDAC1 associated... 29 2.1
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 29 2.1
AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein pr... 29 2.1
AL034555-6|CAI19528.1| 296|Homo sapiens SMART/HDAC1 associated ... 29 2.1
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 29 2.1
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 29 2.1
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 29 2.1
AK074074-1|BAB84900.1| 1731|Homo sapiens FLJ00145 protein protein. 29 2.1
AF414184-1|AAL24502.1| 534|Homo sapiens deleted in azoospermia ... 29 2.1
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 29 2.1
AF271088-1|AAF91406.1| 501|Homo sapiens deleted in azoospermia ... 29 2.1
AF271087-1|AAF91405.1| 458|Homo sapiens deleted in azoospermia ... 29 2.1
AF248483-1|AAF91332.1| 413|Homo sapiens deleted in azoospermia ... 29 2.1
AF248482-1|AAF91331.1| 331|Homo sapiens deleted in azoospermia ... 29 2.1
AF248481-1|AAF91330.1| 486|Homo sapiens deleted in azoospermia ... 29 2.1
AF248480-1|AAF91329.1| 558|Homo sapiens deleted in azoospermia ... 29 2.1
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 29 2.1
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 29 2.7
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 29 2.7
BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein. 29 2.7
BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif prote... 29 2.7
BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for IM... 29 2.7
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 29 2.7
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 29 2.7
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 29 2.7
AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein pr... 29 2.7
AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif prote... 29 2.7
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 29 2.7
AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein. 29 2.7
AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein. 29 2.7
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 29 3.6
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 29 3.6
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 29 3.6
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 29 3.6
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 29 3.6
AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation fa... 29 3.6
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 29 3.6
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 28 4.7
DQ294957-1|ABB99396.1| 119|Homo sapiens coactivator regulator p... 28 4.7
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 28 4.7
BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein. 28 4.7
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 28 4.7
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 28 4.7
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 28 4.7
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 28 4.7
BC000488-1|AAH00488.1| 669|Homo sapiens RBM14 protein protein. 28 4.7
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 28 4.7
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 28 4.7
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 28 4.7
AK222830-1|BAD96550.1| 669|Homo sapiens RNA binding motif prote... 28 4.7
AF315633-1|AAK77962.1| 156|Homo sapiens coactivator modulator p... 28 4.7
AF315632-1|AAK77961.1| 669|Homo sapiens coactivator activator p... 28 4.7
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 28 4.7
AF080561-1|AAC64058.1| 669|Homo sapiens SYT interacting protein... 28 4.7
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 28 4.7
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 28 6.3
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 28 6.3
X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein. 28 6.3
U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding prot... 28 6.3
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 28 6.3
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 28 6.3
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 28 6.3
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 28 6.3
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 28 6.3
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 28 6.3
BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II... 28 6.3
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 28 6.3
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 28 6.3
AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II... 28 6.3
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 28 6.3
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 28 6.3
AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein. 28 6.3
AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein. 28 6.3
U38448-1|AAB49813.1| 35|Homo sapiens RBM protein. 27 8.3
CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 27 8.3
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 27 8.3
BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 27 8.3
BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein. 27 8.3
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 27 8.3
BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 27 8.3
BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein MG... 27 8.3
BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein. 27 8.3
BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 27 8.3
AY681494-1|AAW01463.1| 29|Homo sapiens MEF2D/DAZAP1 fusion pro... 27 8.3
AK125288-1|BAC86115.1| 124|Homo sapiens protein ( Homo sapiens ... 27 8.3
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 27 8.3
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 27 8.3
AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 27 8.3
AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 27 8.3
AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 27 8.3
AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein. 27 8.3
>D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA binding
factor protein.
Length = 271
Score = 93.9 bits (223), Expect = 8e-20
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 166
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 30 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 89
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + S+++I+ +F FG I +E+P
Sbjct: 90 GLSPDTSEEQIKEYFGAFGEIENIELP 116
>D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein.
Length = 301
Score = 93.9 bits (223), Expect = 8e-20
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 166
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 60 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 119
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + S+++I+ +F FG I +E+P
Sbjct: 120 GLSPDTSEEQIKEYFGAFGEIENIELP 146
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 95 EHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
E K++ K + GK+F+GGL+ + S ++ + S FG +++
Sbjct: 11 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 57
>CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein.
Length = 420
Score = 93.9 bits (223), Expect = 8e-20
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 166
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 179 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 238
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + S+++I+ +F FG I +E+P
Sbjct: 239 GLSPDTSEEQIKEYFGAFGEIENIELP 265
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 95 EHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
E K++ K + GK+F+GGL+ + S ++ + S FG +++
Sbjct: 130 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 176
>BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 93.9 bits (223), Expect = 8e-20
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 166
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 179 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 238
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + S+++I+ +F FG I +E+P
Sbjct: 239 GLSPDTSEEQIKEYFGAFGEIENIELP 265
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 95 EHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
E K++ K + GK+F+GGL+ + S ++ + S FG +++
Sbjct: 130 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 176
>BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 93.9 bits (223), Expect = 8e-20
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 166
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 179 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 238
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + S+++I+ +F FG I +E+P
Sbjct: 239 GLSPDTSEEQIKEYFGAFGEIENIELP 265
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 95 EHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
E K++ K + GK+F+GGL+ + S ++ + S FG +++
Sbjct: 130 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 176
>BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein.
Length = 415
Score = 93.9 bits (223), Expect = 8e-20
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 166
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 174 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 233
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + S+++I+ +F FG I +E+P
Sbjct: 234 GLSPDTSEEQIKEYFGAFGEIENIELP 260
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 95 EHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
E K++ K + GK+F+GGL+ + S ++ + S FG +++
Sbjct: 125 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 171
>AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor
protein.
Length = 298
Score = 93.9 bits (223), Expect = 8e-20
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 166
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 57 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 116
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + S+++I+ +F FG I +E+P
Sbjct: 117 GLSPDTSEEQIKEYFGAFGEIENIELP 143
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 95 EHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
E K++ K + GK+F+GGL+ + S ++ + S FG +++
Sbjct: 8 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 54
>AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein.
Length = 420
Score = 93.9 bits (223), Expect = 8e-20
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 166
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 179 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 238
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + S+++I+ +F FG I +E+P
Sbjct: 239 GLSPDTSEEQIKEYFGAFGEIENIELP 265
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 95 EHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
E K++ K + GK+F+GGL+ + S ++ + S FG +++
Sbjct: 130 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 176
>AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein.
Length = 244
Score = 93.9 bits (223), Expect = 8e-20
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 166
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 60 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 119
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + S+++I+ +F FG I +E+P
Sbjct: 120 GLSPDTSEEQIKEYFGAFGEIENIELP 146
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 95 EHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
E K++ K + GK+F+GGL+ + S ++ + S FG +++
Sbjct: 11 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 57
>AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 93.9 bits (223), Expect = 8e-20
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 166
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 179 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 238
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + S+++I+ +F FG I +E+P
Sbjct: 239 GLSPDTSEEQIKEYFGAFGEIENIELP 265
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 95 EHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
E K++ K + GK+F+GGL+ + S ++ + S FG +++
Sbjct: 130 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 176
>AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein.
Length = 301
Score = 93.9 bits (223), Expect = 8e-20
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 166
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 60 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 119
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + S+++I+ +F FG I +E+P
Sbjct: 120 GLSPDTSEEQIKEYFGAFGEIENIELP 146
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 95 EHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
E K++ K + GK+F+GGL+ + S ++ + S FG +++
Sbjct: 11 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 57
>AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 93.9 bits (223), Expect = 8e-20
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVG 166
+KTDP TGRSRGF F++FK S+DKV+ EH ++ K +DPK+AKA G K+FVG
Sbjct: 179 IKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVG 238
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + S+++I+ +F FG I +E+P
Sbjct: 239 GLSPDTSEEQIKEYFGAFGEIENIELP 265
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 95 EHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
E K++ K + GK+F+GGL+ + S ++ + S FG +++
Sbjct: 130 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVD 176
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 166
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 107 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 166
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + +++IR +F FG + +E+P
Sbjct: 167 GLSPDTPEEKIREYFGGFGEVESIELP 193
Score = 39.1 bits (87), Expect = 0.003
Identities = 13/40 (32%), Positives = 29/40 (72%)
Frame = +2
Query: 116 KVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+D K + GK+F+GGL+ + + +++++FS+FG +++
Sbjct: 65 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVD 104
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 195 DNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 239
>M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein.
Length = 328
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 166
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 107 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 166
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + +++IR +F FG + +E+P
Sbjct: 167 GLSPDTPEEKIREYFGGFGEVESIELP 193
Score = 31.9 bits (69), Expect = 0.39
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +2
Query: 134 AKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
A+ K+F+GGL+ + + +++++FS+FG +++
Sbjct: 71 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 104
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 166
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + +++IR +F FG + +E+P
Sbjct: 188 GLSPDTPEEKIREYFGGFGEVESIELP 214
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 216 DNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 31.9 bits (69), Expect = 0.39
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +2
Query: 134 AKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
A+ K+F+GGL+ + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 166
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 37 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 96
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + +++IR +F FG + +E+P
Sbjct: 97 GLSPDTPEEKIREYFGGFGEVESIELP 123
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 125 DNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 169
Score = 31.9 bits (69), Expect = 0.39
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +2
Query: 134 AKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
A+ K+F+GGL+ + + +++++FS+FG +++
Sbjct: 1 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 34
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 166
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + +++IR +F FG + +E+P
Sbjct: 188 GLSPDTPEEKIREYFGGFGEVESIELP 214
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 216 DNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 31.9 bits (69), Expect = 0.39
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +2
Query: 134 AKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
A+ K+F+GGL+ + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 166
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 40 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 99
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + +++IR +F FG + +E+P
Sbjct: 100 GLSPDTPEEKIREYFGGFGEVESIELP 126
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 128 DNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 172
Score = 33.9 bits (74), Expect = 0.096
Identities = 11/35 (31%), Positives = 26/35 (74%)
Frame = +2
Query: 131 KAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
K + GK+F+GGL+ + + +++++FS+FG +++
Sbjct: 3 KNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVD 37
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 169
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 160
Query: 170 LTSEISDDEIRNFFSEFGTILEVEMP 247
L E ++++IR +F EFG I +E+P
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELP 186
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 188 DPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 35.1 bits (77), Expect = 0.041
Identities = 12/40 (30%), Positives = 29/40 (72%)
Frame = +2
Query: 116 KVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+++ K + GK+FVGGL+ + S +++++F++FG +++
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 98
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 166
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + +++IR +F FG + +E+P
Sbjct: 188 GLSPDTPEEKIREYFGGFGEVESIELP 214
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 216 DNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 31.9 bits (69), Expect = 0.39
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +2
Query: 134 AKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
A+ K+F+GGL+ + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 166
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + +++IR +F FG + +E+P
Sbjct: 188 GLSPDTPEEKIREYFGGFGEVESIELP 214
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 216 DNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 31.9 bits (69), Expect = 0.39
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +2
Query: 134 AKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
A+ K+F+GGL+ + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 169
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 160
Query: 170 LTSEISDDEIRNFFSEFGTILEVEMP 247
L E ++++IR +F EFG I +E+P
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELP 186
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 188 DPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 35.1 bits (77), Expect = 0.041
Identities = 12/40 (30%), Positives = 29/40 (72%)
Frame = +2
Query: 116 KVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+++ K + GK+FVGGL+ + S +++++F++FG +++
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 98
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 169
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 160
Query: 170 LTSEISDDEIRNFFSEFGTILEVEMP 247
L E ++++IR +F EFG I +E+P
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELP 186
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 188 DPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 35.1 bits (77), Expect = 0.041
Identities = 12/40 (30%), Positives = 29/40 (72%)
Frame = +2
Query: 116 KVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+++ K + GK+FVGGL+ + S +++++F++FG +++
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 98
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 169
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 160
Query: 170 LTSEISDDEIRNFFSEFGTILEVEMP 247
L E ++++IR +F EFG I +E+P
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELP 186
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 188 DPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 35.1 bits (77), Expect = 0.041
Identities = 12/40 (30%), Positives = 29/40 (72%)
Frame = +2
Query: 116 KVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+++ K + GK+FVGGL+ + S +++++F++FG +++
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 98
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 166
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + +++IR +F FG + +E+P
Sbjct: 188 GLSPDTPEEKIREYFGGFGEVESIELP 214
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 216 DNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 31.9 bits (69), Expect = 0.39
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +2
Query: 134 AKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
A+ K+F+GGL+ + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 169
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 160
Query: 170 LTSEISDDEIRNFFSEFGTILEVEMP 247
L E ++++IR +F EFG I +E+P
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELP 186
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 188 DPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 35.1 bits (77), Expect = 0.041
Identities = 12/40 (30%), Positives = 29/40 (72%)
Frame = +2
Query: 116 KVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+++ K + GK+FVGGL+ + S +++++F++FG +++
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 98
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 169
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 160
Query: 170 LTSEISDDEIRNFFSEFGTILEVEMP 247
L E ++++IR +F EFG I +E+P
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELP 186
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 188 DPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 35.1 bits (77), Expect = 0.041
Identities = 12/40 (30%), Positives = 29/40 (72%)
Frame = +2
Query: 116 KVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+++ K + GK+FVGGL+ + S +++++F++FG +++
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 98
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 169
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 160
Query: 170 LTSEISDDEIRNFFSEFGTILEVEMP 247
L E ++++IR +F EFG I +E+P
Sbjct: 161 LNPEATEEKIREYFGEFGEIEAIELP 186
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 188 DPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 35.1 bits (77), Expect = 0.041
Identities = 12/40 (30%), Positives = 29/40 (72%)
Frame = +2
Query: 116 KVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+++ K + GK+FVGGL+ + S +++++F++FG +++
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 98
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 166
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 120 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 179
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + +++IR +F FG + +E+P
Sbjct: 180 GLSPDTPEEKIREYFGGFGEVESIELP 206
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 208 DNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 252
Score = 31.9 bits (69), Expect = 0.39
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +2
Query: 134 AKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
A+ K+F+GGL+ + + +++++FS+FG +++
Sbjct: 84 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 117
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 166
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 109 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 168
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + +++IR +F FG + +E+P
Sbjct: 169 GLSPDTPEEKIREYFGGFGEVESIELP 195
Score = 39.1 bits (87), Expect = 0.003
Identities = 13/40 (32%), Positives = 29/40 (72%)
Frame = +2
Query: 116 KVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+D K + GK+F+GGL+ + + +++++FS+FG +++
Sbjct: 67 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVD 106
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 197 DNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 241
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 166
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + +++IR +F FG + +E+P
Sbjct: 188 GLSPDTPEEKIREYFGGFGEVESIELP 214
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 216 DNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 31.9 bits (69), Expect = 0.39
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +2
Query: 134 AKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
A+ K+F+GGL+ + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 166
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + +++IR +F FG + +E+P
Sbjct: 188 GLSPDTPEEKIREYFGGFGEVESIELP 214
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 216 DNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 31.9 bits (69), Expect = 0.39
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +2
Query: 134 AKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
A+ K+F+GGL+ + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVG 166
+K DP TGRSRGF F++FK ES+DKVM EH +N K +DPK+AKA KIFVG
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVG 187
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEMP 247
GL+ + +++IR +F FG + +E+P
Sbjct: 188 GLSPDTPEEKIREYFGGFGEVESIELP 214
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF FI FK E + K+M H + K + K A ++
Sbjct: 216 DNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 31.9 bits (69), Expect = 0.39
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +2
Query: 134 AKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
A+ K+F+GGL+ + + +++++FS+FG +++
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVD 125
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 87.0 bits (206), Expect = 1e-17
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 169
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 99 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 158
Query: 170 LTSEI-SDDEIRNFFSEFGTILEVEMP 247
L E ++++IR +F EFG I +E+P
Sbjct: 159 LNPESPTEEKIREYFGEFGEIEAIELP 185
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 187 DPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 231
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = +2
Query: 89 AGEHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
AG T +++ K + GK+FVGGL+ + S +++++F++FG +++
Sbjct: 48 AGIRTAPRDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 96
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 87.0 bits (206), Expect = 1e-17
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGG 169
+K DPNTGRSRGF FI+FK S++KV+ EH ++ + +DPKKA A KIFVGG
Sbjct: 99 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGG 158
Query: 170 LTSEI-SDDEIRNFFSEFGTILEVEMP 247
L E ++++IR +F EFG I +E+P
Sbjct: 159 LNPESPTEEKIREYFGEFGEIEAIELP 185
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
DP + RGF FI FK E + KV+ HT++ K + K A+ +
Sbjct: 187 DPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 231
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = +2
Query: 89 AGEHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
AG T +++ K + GK+FVGGL+ + S +++++F++FG +++
Sbjct: 48 AGIRTAPRDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVD 96
>BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2
(Drosophila) protein.
Length = 328
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGK 154
V DP T RSRGF F+ F P S+DKV+ H +++K +DPK K R K
Sbjct: 52 VMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKK 111
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEMPF 250
IFVGGL++ ++++ +F +FG + + + F
Sbjct: 112 IFVGGLSANTVVEDVKQYFEQFGKVEDAMLMF 143
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T R RGF F+ F+ + ++KV H INNK V+ KKA+ +
Sbjct: 144 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 188
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILE 235
GK+F+GGL+ + S D +R++FS+FG I E
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRE 49
>AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ36569 fis, clone TRACH2010824, highly similar to
Ribonucleoprotein. ).
Length = 251
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGK 154
V DP T RSRGF F+ F P S+DKV+ H +++K +DPK K R K
Sbjct: 48 VMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKK 107
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEMPF 250
IFVGGL++ ++++ +F +FG + + + F
Sbjct: 108 IFVGGLSANTVVEDVKQYFEQFGKVEDAMLMF 139
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T R RGF F+ F+ + ++KV H INNK V+ KKA+ +
Sbjct: 140 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 184
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL+ + S D +R++FS+FG I E
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRE 45
>X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP core
protein A1. ).
Length = 320
Score = 66.5 bits (155), Expect = 1e-11
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F +FG I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQFGKIEVIEI 136
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TD +G+ +GFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 136 IMTDRGSGKKKGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 66.5 bits (155), Expect = 1e-11
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F +FG I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQFGKIEVIEI 136
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein.
Length = 362
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGK 154
V DP T RSRGF F+ F +DKV+A H +++K +DPK K R K
Sbjct: 51 VMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKK 110
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEMPF 250
IFVGGL+ + ++++ +F +FG + + + F
Sbjct: 111 IFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMF 142
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T R RGF F+ F++ + ++KV H INNK V+ KKA+ +
Sbjct: 143 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 30.7 bits (66), Expect = 0.89
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL+ + + + +R +F +FG + E
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKE 48
>AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein.
Length = 362
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGK 154
V DP T RSRGF F+ F +DKV+A H +++K +DPK K R K
Sbjct: 51 VMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKK 110
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEMPF 250
IFVGGL+ + ++++ +F +FG + + + F
Sbjct: 111 IFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMF 142
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T R RGF F+ F++ + ++KV H INNK V+ KKA+ +
Sbjct: 143 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 30.7 bits (66), Expect = 0.89
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL+ + + + +R +F +FG + E
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKE 48
>X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1
protein.
Length = 320
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein.
Length = 320
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSASPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein.
Length = 267
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein.
Length = 320
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for
IMAGE:3615335) protein.
Length = 298
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 23 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 82
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 83 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 114
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 114 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 161
>BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TD +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 183
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein.
Length = 341
Score = 64.9 bits (151), Expect = 4e-11
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----------- 148
V DP + RSRGF F+ F + +D MAA H+I+ + V+PK+A AR
Sbjct: 40 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 99
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGG+ + + +R++F E+G I +E+
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEI 131
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 8 TDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
TD +G+ RGF F+ F + +DK++ HTIN + +KA +R
Sbjct: 133 TDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSR 178
Score = 33.9 bits (74), Expect = 0.096
Identities = 10/36 (27%), Positives = 26/36 (72%)
Frame = +2
Query: 128 KKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
++ K + K+F+GGL+ E +++ +RN++ ++G + +
Sbjct: 2 EREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTD 37
>M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2
protein mRNA. ).
Length = 341
Score = 64.9 bits (151), Expect = 4e-11
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----------- 148
V DP + RSRGF F+ F + +D MAA H+I+ + V+PK+A AR
Sbjct: 40 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 99
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGG+ + + +R++F E+G I +E+
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEI 131
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 8 TDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
TD +G+ RGF F+ F + +DK++ HTIN + +KA +R
Sbjct: 133 TDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSR 178
Score = 33.9 bits (74), Expect = 0.096
Identities = 10/36 (27%), Positives = 26/36 (72%)
Frame = +2
Query: 128 KKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
++ K + K+F+GGL+ E +++ +RN++ ++G + +
Sbjct: 2 EREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTD 37
>M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein.
Length = 353
Score = 64.9 bits (151), Expect = 4e-11
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----------- 148
V DP + RSRGF F+ F + +D MAA H+I+ + V+PK+A AR
Sbjct: 52 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 111
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGG+ + + +R++F E+G I +E+
Sbjct: 112 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEI 143
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 8 TDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
TD +G+ RGF F+ F + +DK++ HTIN + +KA +R
Sbjct: 145 TDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSR 190
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/48 (29%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 95 EHTINNKKVDPKKA-KARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
E T+ ++ KK K + K+F+GGL+ E +++ +RN++ ++G + +
Sbjct: 2 EKTLETVPLERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTD 49
>D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein.
Length = 341
Score = 64.9 bits (151), Expect = 4e-11
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----------- 148
V DP + RSRGF F+ F + +D MAA H+I+ + V+PK+A AR
Sbjct: 40 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 99
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGG+ + + +R++F E+G I +E+
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEI 131
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 8 TDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
TD +G+ RGF F+ F + +DK++ HTIN + +KA +R
Sbjct: 133 TDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSR 178
Score = 33.9 bits (74), Expect = 0.096
Identities = 10/36 (27%), Positives = 26/36 (72%)
Frame = +2
Query: 128 KKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
++ K + K+F+GGL+ E +++ +RN++ ++G + +
Sbjct: 2 EREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTD 37
>D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein.
Length = 353
Score = 64.9 bits (151), Expect = 4e-11
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----------- 148
V DP + RSRGF F+ F + +D MAA H+I+ + V+PK+A AR
Sbjct: 52 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 111
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGG+ + + +R++F E+G I +E+
Sbjct: 112 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEI 143
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 8 TDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
TD +G+ RGF F+ F + +DK++ HTIN + +KA +R
Sbjct: 145 TDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSR 190
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/48 (29%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 95 EHTINNKKVDPKKA-KARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
E T+ ++ KK K + K+F+GGL+ E +++ +RN++ ++G + +
Sbjct: 2 EKTLETVPLERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTD 49
>BC000506-1|AAH00506.3| 249|Homo sapiens HNRPA2B1 protein protein.
Length = 249
Score = 64.9 bits (151), Expect = 4e-11
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH----------- 148
V DP + RSRGF F+ F + +D MAA H+I+ + V+PK+A AR
Sbjct: 40 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 99
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGG+ + + +R++F E+G I +E+
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEI 131
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 8 TDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
TD +G+ RGF F+ F + +DK++ HTIN + +KA +R
Sbjct: 133 TDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSR 178
Score = 33.9 bits (74), Expect = 0.096
Identities = 10/36 (27%), Positives = 26/36 (72%)
Frame = +2
Query: 128 KKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
++ K + K+F+GGL+ E +++ +RN++ ++G + +
Sbjct: 2 EREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTD 37
>BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1-like protein.
Length = 320
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 136
+ TD +G+ RGFAF+ F +S+DK++ HT+ + +KA
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRKA 180
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSASPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA
sequence from clone RP11-78J21 on chromosome
13q32.2-33.3 Contains 2 novel genes, a pseudogene
similar to part of TPTE and ).
Length = 320
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DPNT RSRGF F+ + E +D M H ++ + V+PK+A +R
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 136
+ TD +G+ RGFAF+ F +S+DK++ HT+ + +KA
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRKA 180
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +2
Query: 110 NKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
+K PK+ + K+F+GGL+ E +D+ +R+ F ++GT+ +
Sbjct: 2 SKSASPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTD 42
>BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein.
Length = 378
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DP T RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTV 125
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 157
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
V D +G+ RGFAF+ F +++DK++ HTIN + KKA ++
Sbjct: 157 VMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSK 204
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +2
Query: 122 DPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
DPK+ + K+F+GGL+ E +DD +R F ++GT+ +
Sbjct: 27 DPKEPEQLR-KLFIGGLSFETTDDSLREHFEKWGTLTD 63
>BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DP T RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTV 125
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 157
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
V D +G+ RGFAF+ F +++DK++ HTIN + KKA ++
Sbjct: 157 VMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSK 204
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +2
Query: 122 DPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
DPK+ + K+F+GGL+ E +DD +R F ++GT+ +
Sbjct: 27 DPKEPEQLR-KLFIGGLSFETTDDSLREHFEKWGTLTD 63
>AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DP T RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTV 125
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 157
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
V D +G+ RGFAF+ F +++DK++ HTIN + KKA ++
Sbjct: 157 VMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSK 204
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +2
Query: 122 DPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
DPK+ + K+F+GGL+ E +DD +R F ++GT+ +
Sbjct: 27 DPKEPEQLR-KLFIGGLSFETTDDSLREHFEKWGTLTD 63
>AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DP T RSRGF F+ + E +D M A H ++ + V+PK+A +R
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTV 125
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + + +R++F ++G I +E+
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 157
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
V D +G+ RGFAF+ F +++DK++ HTIN + KKA ++
Sbjct: 157 VMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSK 204
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +2
Query: 122 DPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
DPK+ + K+F+GGL+ E +DD +R F ++GT+ +
Sbjct: 27 DPKEPEQLR-KLFIGGLSFETTDDSLREHFEKWGTLTD 63
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG--------KI 157
VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++ K+
Sbjct: 135 VKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSRKV 193
Query: 158 FVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
FVG T ++++DE+R FFS++G +++V +P
Sbjct: 194 FVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG--------KI 157
VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++ K+
Sbjct: 135 VKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSRKV 193
Query: 158 FVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
FVG T ++++DE+R FFS++G +++V +P
Sbjct: 194 FVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG--------KI 157
VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++ K+
Sbjct: 135 VKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSRKV 193
Query: 158 FVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
FVG T ++++DE+R FFS++G +++V +P
Sbjct: 194 FVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG--------KI 157
VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++ K+
Sbjct: 135 VKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSRKV 193
Query: 158 FVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
FVG T ++++DE+R FFS++G +++V +P
Sbjct: 194 FVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG--------KI 157
VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++ K+
Sbjct: 135 VKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSRKV 193
Query: 158 FVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
FVG T ++++DE+R FFS++G +++V +P
Sbjct: 194 FVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG--------KI 157
VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++ K+
Sbjct: 135 VKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSRKV 193
Query: 158 FVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
FVG T ++++DE+R FFS++G +++V +P
Sbjct: 194 FVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG--------KI 157
VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++ K+
Sbjct: 135 VKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSRKV 193
Query: 158 FVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
FVG T ++++DE+R FFS++G +++V +P
Sbjct: 194 FVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG--------KI 157
VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++ K+
Sbjct: 135 VKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSRKV 193
Query: 158 FVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
FVG T ++++DE+R FFS++G +++V +P
Sbjct: 194 FVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein
variant protein.
Length = 414
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG--------KI 157
VK D TG S+GF F+ F E+ KVM+ H I+ + D K ++ K+
Sbjct: 135 VKKDLKTGHSKGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSRKV 193
Query: 158 FVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
FVG T ++++DE+R FFS++G +++V +P
Sbjct: 194 FVGRCTGDMTEDELREFFSQYGDVMDVFIP 223
>U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous
ribonucleoprotein A0 protein.
Length = 305
Score = 57.2 bits (132), Expect = 9e-09
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 151
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGGL ++++ ++ FS+FGT+ + E+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGG 169
D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ GG
Sbjct: 132 DKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSGG 183
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein.
Length = 305
Score = 57.2 bits (132), Expect = 9e-09
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 151
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGGL ++++ ++ FS+FGT+ + E+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGG 169
D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ GG
Sbjct: 132 DKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSGG 183
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 57.2 bits (132), Expect = 9e-09
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 151
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGGL ++++ ++ FS+FGT+ + E+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGG 169
D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ GG
Sbjct: 132 DKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSGG 183
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 57.2 bits (132), Expect = 9e-09
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 151
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGGL ++++ ++ FS+FGT+ + E+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGG 169
D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ GG
Sbjct: 132 DKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSGG 183
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 57.2 bits (132), Expect = 9e-09
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 151
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGGL ++++ ++ FS+FGT+ + E+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGG 169
D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ GG
Sbjct: 132 DKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSGG 183
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 57.2 bits (132), Expect = 9e-09
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 151
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGGL ++++ ++ FS+FGT+ + E+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGG 169
D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ GG
Sbjct: 132 DKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSGG 183
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 57.2 bits (132), Expect = 9e-09
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 151
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGGL ++++ ++ FS+FGT+ + E+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGG 169
D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ GG
Sbjct: 132 DKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSGG 183
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 57.2 bits (132), Expect = 9e-09
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 151
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGGL ++++ ++ FS+FGT+ + E+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGG 169
D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ GG
Sbjct: 132 DKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSGG 183
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 57.2 bits (132), Expect = 9e-09
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 151
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGGL ++++ ++ FS+FGT+ + E+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGG 169
D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ GG
Sbjct: 132 DKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSGG 183
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 57.2 bits (132), Expect = 9e-09
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 151
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGGL ++++ ++ FS+FGT+ + E+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGG 169
D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ GG
Sbjct: 132 DKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSGG 183
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 57.2 bits (132), Expect = 9e-09
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----KARHG----- 151
V +P T RSR F F+ + E D MAA H ++ V+ K+A AR G
Sbjct: 38 VVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKV 97
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+FVGGL ++++ ++ FS+FGT+ + E+
Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGG 169
D +G+ RGF F+ F+ ++ DK H I +V+ KKA + I+ GG
Sbjct: 132 DKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSGG 183
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL + S+ +R F FGT+ +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTD 35
>BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK----------KAKARHG 151
+ D T +SRGF F+ FK P + V+A+ HT++ + +DPK + + + G
Sbjct: 41 IMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEG 100
Query: 152 -------------KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + E+R +F +FG + EV M
Sbjct: 101 WQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVM 144
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 154
D R RGF FI F+ +S+D+ + H I KKV+ K+A+ R K
Sbjct: 147 DAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSK 194
Score = 33.5 bits (73), Expect = 0.13
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +2
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILE 235
GK+FVGGL + + +R++FS++G +++
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVD 38
>AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion
protein protein.
Length = 454
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK----------KAKARHG 151
+ D T +SRGF F+ FK P + V+A+ HT++ + +DPK + + + G
Sbjct: 41 IMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEG 100
Query: 152 -------------KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + E+R +F +FG + EV M
Sbjct: 101 WQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVM 144
Score = 33.5 bits (73), Expect = 0.13
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +2
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILE 235
GK+FVGGL + + +R++FS++G +++
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVD 38
>AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK----------KAKARHG 151
+ D T +SRGF F+ FK P + V+A+ HT++ + +DPK + + + G
Sbjct: 41 IMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEG 100
Query: 152 -------------KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVGG+ + E+R +F +FG + EV M
Sbjct: 101 WQKGPRSDYSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVM 144
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 154
D R RGF FI F+ +S+D+ + H I KKV+ K+A+ R K
Sbjct: 147 DAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSK 194
Score = 33.5 bits (73), Expect = 0.13
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +2
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILE 235
GK+FVGGL + + +R++FS++G +++
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVD 38
>S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein.
Length = 269
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------- 151
V DP T RSRGF F+ + +D + A ++ + V+PK+A +R
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVTEVDAAIGARPFKVDGRVVEPKRAVSREDSVKPGAHLTV 125
Query: 152 -KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
KIFVG + + + +R++F ++G I +E+
Sbjct: 126 KKIFVGSIKEDTEEYNLRDYFEKYGKIETIEV 157
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
V D +G+ RGFA + F +++DK++ HTIN + KKA A+
Sbjct: 157 VMEDRQSGKKRGFASVTFDDHDTVDKIVVQKYHTINGHNCEVKKALAK 204
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +2
Query: 122 DPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
DPK+ + K+F+GGL+ E +DD +R F ++GT+ +
Sbjct: 27 DPKEPEQLR-KLFIGGLSFETTDDSLREHFEKWGTLTD 63
>X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for
hnRNP C protein cross-reacting with C1 and C2 hnRNP
core proteins. ).
Length = 225
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Frame = +2
Query: 29 SRGFAFIVFKAPESIDKVMAAGEHTINNKKV-DPKKAKARHGK-----IFVGGLTSEISD 190
S+ F + ++DKVM + IN+ KV DPK+AKA K IFVGGL+ + +
Sbjct: 128 SQASRFALLFKESNVDKVMI--KKNINSWKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPE 185
Query: 191 DEIRNFFSEFGTILEVEMP 247
++IR +F FG + +E+P
Sbjct: 186 EKIREYFGGFGEVESIELP 204
>AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Frame = +2
Query: 44 FIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLTSEISDDE 196
F+ F +DKV+A H +++K +DPK K R KIFVGGL+ + ++
Sbjct: 2 FVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVED 61
Query: 197 IRNFFSEFGTILEVEMPF 250
++ +F +FG + + + F
Sbjct: 62 VKQYFEQFGKVDDAMLMF 79
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T R RGF F+ F++ + ++KV H INNK V+ KKA+ +
Sbjct: 80 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 124
>AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Frame = +2
Query: 44 FIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLTSEISDDE 196
F+ F +DKV+A H +++K +DPK K R KIFVGGL+ + ++
Sbjct: 2 FVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVED 61
Query: 197 IRNFFSEFGTILEVEMPF 250
++ +F +FG + + + F
Sbjct: 62 VKQYFEQFGKVDDAMLMF 79
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T R RGF F+ F++ + ++KV H INNK V+ KKA+ +
Sbjct: 80 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 124
>AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein.
Length = 180
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Frame = +2
Query: 44 FIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLTSEISDDE 196
F+ F +DKV+A H +++K +DPK K R KIFVGGL+ + ++
Sbjct: 2 FVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVED 61
Query: 197 IRNFFSEFGTILEVEMPF 250
++ +F +FG + + + F
Sbjct: 62 VKQYFEQFGKVDDAMLMF 79
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T R RGF F+ F++ + ++KV H INNK V+ KKA+ +
Sbjct: 80 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 124
>X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRNA
fragment DNA binding protein UPI homologue
(C-terminus). ).
Length = 196
Score = 48.4 bits (110), Expect = 4e-06
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
+ TDP +G+ RGFAF+ F +S+DK++ HT+N + +KA ++
Sbjct: 12 IMTDPGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 59
>AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein.
Length = 179
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Frame = +2
Query: 53 FKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------KIFVGGLTSEISDDEIRN 205
F +DKV+A H +++K +DPK A R KIFVGGL+ + ++++
Sbjct: 2 FMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQ 61
Query: 206 FFSEFGTILEVEMPF 250
+F +FG + + + F
Sbjct: 62 YFEQFGKVDDAMLMF 76
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T R RGF F+ F++ + ++KV H INNK V+ KKA+ +
Sbjct: 77 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 121
>BC017560-1|AAH17560.1| 151|Homo sapiens MSI2 protein protein.
Length = 151
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T R RGF F+ F+ + ++KV H INNK V+ KKA+ +
Sbjct: 40 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 84
Score = 31.9 bits (69), Expect = 0.39
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEMPF 250
R KIFVGGL++ ++++ +F +FG + + + F
Sbjct: 4 RTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMF 39
>AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA
sequence from clone RP11-223F20 on chromosome 13
Contains a novel heterogeneous nuclear ribonucleoprotein
family A protein and).
Length = 276
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
V D +G+ RGFAF+ F + IDK++ HTIN + KKA ++
Sbjct: 54 VMEDRQSGKKRGFAFVTFDDHDIIDKIVVQKYHTINGHNCEVKKALSK 101
>AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ32288 fis, clone PROST2000325, highly similar to
Homo sapiens DAZ associated protein 1 (DAZAP1) mRNA. ).
Length = 289
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 154
D R RGF FI F+ +S+D+ + H I KKV+ K+A+ R K
Sbjct: 58 DAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSK 105
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 125 PKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
P+ ++ KIFVGG+ + E+R +F +FG + EV M
Sbjct: 16 PRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVM 55
>BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like
(Drosophila) protein.
Length = 283
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +2
Query: 104 INNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+NN P+ +IFVGG+ + ++ ++R FFS++G++ EV++
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKI 64
>AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein.
Length = 289
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +2
Query: 104 INNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+NN P+ +IFVGG+ + ++ ++R FFS++G++ EV++
Sbjct: 24 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKI 70
>AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens
cDNA FLJ36134 fis, clone TESTI2024648, weakly similar to
Homo sapiens germline specific RNA binding protein
(DAZL1) mRNA. ).
Length = 339
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +2
Query: 104 INNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+NN P+ +IFVGG+ + ++ ++R FFS++G++ EV++
Sbjct: 24 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKI 70
>AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens
cDNA FLJ25370 fis, clone TST01870. ).
Length = 283
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +2
Query: 104 INNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+NN P+ +IFVGG+ + ++ ++R FFS++G++ EV++
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKI 64
>AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein.
Length = 283
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +2
Query: 104 INNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+NN P+ +IFVGG+ + ++ ++R FFS++G++ EV++
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKI 64
>AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein.
Length = 283
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +2
Query: 104 INNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+NN P+ +IFVGG+ + ++ ++R FFS++G++ EV++
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKI 64
>BC047522-1|AAH47522.1| 402|Homo sapiens BRUNOL5 protein protein.
Length = 402
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNK----KVDPKKAKARHG---K 154
V DP TG +G AF+ + A +S K A + T+ +V P +++R G K
Sbjct: 76 VLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRK 135
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILE 235
+FVG L + S++++ F FG I E
Sbjct: 136 LFVGMLNKQQSEEDVLRLFQPFGVIDE 162
>BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA binding
protein (Drosophila) protein.
Length = 485
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNK----KVDPKKAKARHG---K 154
V DP TG +G AF+ + A +S K A + T+ +V P +++R G K
Sbjct: 76 VLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRK 135
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILE 235
+FVG L + S++++ F FG I E
Sbjct: 136 LFVGMLNKQQSEEDVLRLFQPFGVIDE 162
>AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like
factor 5 protein.
Length = 481
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNK----KVDPKKAKARHG---K 154
V DP TG +G AF+ + A +S K A + T+ +V P +++R G K
Sbjct: 76 VLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRK 135
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILE 235
+FVG L + S++++ F FG I E
Sbjct: 136 LFVGMLNKQQSEEDVLRLFQPFGVIDE 162
>AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein
protein.
Length = 544
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 77 KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
KV+ H I K D +K K+F+G ++ + ++++IR FS FG I E
Sbjct: 142 KVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 194
>AB209067-1|BAD92304.1| 421|Homo sapiens bruno-like 5, RNA binding
protein variant protein.
Length = 421
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNK----KVDPKKAKARHG---K 154
V DP TG +G AF+ + A +S K A + T+ +V P +++R G K
Sbjct: 88 VLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRK 147
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILE 235
+FVG L + S++++ F FG I E
Sbjct: 148 LFVGMLNKQQSEEDVLRLFQPFGVIDE 174
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 38.3 bits (85), Expect = 0.004
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KARHGKIFVG 166
D TG +G AF+ + A +S K +A + T+ N+ + K A + K+FVG
Sbjct: 41 DKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVG 100
Query: 167 GLTSEISDDEIRNFFSEFGTILE 235
L + +D+++R F FGTI E
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDE 123
>BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 464
Score = 38.3 bits (85), Expect = 0.004
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KARHGKIFVG 166
D TG +G AF+ + A +S K +A + T+ N+ + K A + K+FVG
Sbjct: 41 DKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVG 100
Query: 167 GLTSEISDDEIRNFFSEFGTILE 235
L + +D+++R F FGTI E
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDE 123
>BC004145-1|AAH04145.2| 291|Homo sapiens TNRC4 protein protein.
Length = 291
Score = 38.3 bits (85), Expect = 0.004
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNK----KVDPKKAKARHG-KIFVGG 169
D TG +G AF+ + A +S K +A + T+ +V P +++R K+FVG
Sbjct: 33 DKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGDRKLFVGM 92
Query: 170 LTSEISDDEIRNFFSEFGTILE 235
L + +D+++R F FGTI E
Sbjct: 93 LGKQQTDEDVRKMFEPFGTIDE 114
>AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 465
Score = 38.3 bits (85), Expect = 0.004
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KARHGKIFVG 166
D TG +G AF+ + A +S K +A + T+ N+ + K A + K+FVG
Sbjct: 41 DKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVG 100
Query: 167 GLTSEISDDEIRNFFSEFGTILE 235
L + +D+++R F FGTI E
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDE 123
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 38.3 bits (85), Expect = 0.004
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTINNK----KVDPKKAKARHG-KIFVGG 169
D TG +G AF+ + A +S K +A + T+ +V P +++R K+FVG
Sbjct: 42 DKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGDRKLFVGM 101
Query: 170 LTSEISDDEIRNFFSEFGTILE 235
L + +D+++R F FGTI E
Sbjct: 102 LGKQQTDEDVRKMFEPFGTIDE 123
>AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 415
Score = 38.3 bits (85), Expect = 0.004
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KARHGKIFVG 166
D TG +G AF+ + A +S K +A + T+ N+ + K A + K+FVG
Sbjct: 41 DKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVG 100
Query: 167 GLTSEISDDEIRNFFSEFGTILE 235
L + +D+++R F FGTI E
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDE 123
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 38.3 bits (85), Expect = 0.004
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KARHGKIFVG 166
D TG +G AF+ + A +S K +A + T+ N+ + K A + K+FVG
Sbjct: 41 DKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVG 100
Query: 167 GLTSEISDDEIRNFFSEFGTILE 235
L + +D+++R F FGTI E
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDE 123
>AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 462
Score = 38.3 bits (85), Expect = 0.004
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KARHGKIFVG 166
D TG +G AF+ + A +S K +A + T+ N+ + K A + K+FVG
Sbjct: 41 DKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVG 100
Query: 167 GLTSEISDDEIRNFFSEFGTILE 235
L + +D+++R F FGTI E
Sbjct: 101 MLGKQQTDEDVRKMFEPFGTIDE 123
>BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein.
Length = 448
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KARHGKI 157
V D TG +G AF+ + ES K +A + T+ N+ + K A + K+
Sbjct: 85 VLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKL 144
Query: 158 FVGGLTSEISDDEIRNFFSEFGTILE 235
FVG L + S+D++R F FG I E
Sbjct: 145 FVGMLNKQQSEDDVRRLFEAFGNIEE 170
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEV 238
K+F+G + + + +++ F EFG I E+
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYEL 83
>AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein
BRUNOL4 protein.
Length = 294
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KARHGKI 157
V D TG +G AF+ + ES K +A + T+ N+ + K A + K+
Sbjct: 85 VLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKL 144
Query: 158 FVGGLTSEISDDEIRNFFSEFGTILE 235
FVG L + S+D++R F FG I E
Sbjct: 145 FVGMLNKQQSEDDVRRLFEAFGNIEE 170
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEV 238
K+F+G + + + +++ F EFG I E+
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYEL 83
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 36.3 bits (80), Expect = 0.018
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K V DP K+ G IF+
Sbjct: 20 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIK 79
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 80 NLDKSIDNKALYDTFSAFGNILSCKV 105
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 305 GRSKGFGFVCFSSPEEATKAV 325
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 36.3 bits (80), Expect = 0.018
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K V DP K+ G IF+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 327 GRSKGFGFVCFSSPEEATKAV 347
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 36.3 bits (80), Expect = 0.018
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K V DP K+ G IF+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 330 GRSKGFGFVCFSSPEEATKAV 350
>U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein.
Length = 482
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 77 KVMAAGEHTINNKKVDPKKAKA-RHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
KV+ H I K D +K A K+F+G ++ + ++++IR FS FG I E
Sbjct: 83 KVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 36.3 bits (80), Expect = 0.018
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K V DP K+ G IF+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 330 GRSKGFGFVCFSSPEEATKAV 350
>BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA
binding protein 1 protein.
Length = 483
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 77 KVMAAGEHTINNKKVDPKKAKA-RHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
KV+ H I K D +K A K+F+G ++ + ++++IR FS FG I E
Sbjct: 83 KVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 36.3 bits (80), Expect = 0.018
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K V DP K+ G IF+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 330 GRSKGFGFVCFSSPEEATKAV 350
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 36.3 bits (80), Expect = 0.018
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K V DP K+ G IF+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 330 GRSKGFGFVCFSSPEEATKAV 350
>AL136097-15|CAI16208.1| 227|Homo sapiens nucleolar protein 8
protein.
Length = 227
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/31 (41%), Positives = 25/31 (80%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+++VGGL+ +IS+ +++N FS FG + +VE+
Sbjct: 9 RLYVGGLSQDISEADLQNQFSRFGEVSDVEI 39
>AL136097-14|CAI16209.1| 205|Homo sapiens nucleolar protein 8
protein.
Length = 205
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/31 (41%), Positives = 25/31 (80%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+++VGGL+ +IS+ +++N FS FG + +VE+
Sbjct: 9 RLYVGGLSQDISEADLQNQFSRFGEVSDVEI 39
>AL136097-13|CAC12712.1| 427|Homo sapiens nucleolar protein 8
protein.
Length = 427
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/31 (41%), Positives = 25/31 (80%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+++VGGL+ +IS+ +++N FS FG + +VE+
Sbjct: 9 RLYVGGLSQDISEADLQNQFSRFGEVSDVEI 39
>AK001049-1|BAA91479.1| 427|Homo sapiens protein ( Homo sapiens
cDNA FLJ10187 fis, clone HEMBA1004596. ).
Length = 427
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/31 (41%), Positives = 25/31 (80%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+++VGGL+ +IS+ +++N FS FG + +VE+
Sbjct: 9 RLYVGGLSQDISEADLQNQFSRFGEVSDVEI 39
>AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor
CUG-BP protein.
Length = 486
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 77 KVMAAGEHTINNKKVDPKKAKA-RHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
KV+ H I K D +K A K+F+G ++ + ++++IR FS FG I E
Sbjct: 83 KVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
>AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A
isoform protein.
Length = 483
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 77 KVMAAGEHTINNKKVDPKKAKA-RHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
KV+ H I K D +K A K+F+G ++ + ++++IR FS FG I E
Sbjct: 83 KVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
>AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYLQ
isoform protein.
Length = 486
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 77 KVMAAGEHTINNKKVDPKKAKA-RHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
KV+ H I K D +K A K+F+G ++ + ++++IR FS FG I E
Sbjct: 83 KVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
>AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein
BRUNOL2 protein.
Length = 486
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 77 KVMAAGEHTINNKKVDPKKAKA-RHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
KV+ H I K D +K A K+F+G ++ + ++++IR FS FG I E
Sbjct: 83 KVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEE 136
>AB109030-1|BAC99315.1| 1167|Homo sapiens Nop132 protein.
Length = 1167
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/31 (41%), Positives = 25/31 (80%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+++VGGL+ +IS+ +++N FS FG + +VE+
Sbjct: 9 RLYVGGLSQDISEADLQNQFSRFGEVSDVEI 39
>AB105104-1|BAD12268.1| 1167|Homo sapiens nucleolar protein 8
protein.
Length = 1167
Score = 36.3 bits (80), Expect = 0.018
Identities = 13/31 (41%), Positives = 25/31 (80%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+++VGGL+ +IS+ +++N FS FG + +VE+
Sbjct: 9 RLYVGGLSQDISEADLQNQFSRFGEVSDVEI 39
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 35.9 bits (79), Expect = 0.024
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH------GKIFVGG 169
D TG+ +G+ F+ F + E D + + K + KA A + IF+G
Sbjct: 47 DRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGN 106
Query: 170 LTSEISDDEIRNFFSEFGTILE 235
L EI + + + FS FG IL+
Sbjct: 107 LDPEIDEKLLYDTFSAFGVILQ 128
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 109
+ DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 132 IMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 169
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 35.9 bits (79), Expect = 0.024
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH------GKIFVGG 169
D TG+ +G+ F+ F + E D + + K + KA A + IF+G
Sbjct: 47 DRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGN 106
Query: 170 LTSEISDDEIRNFFSEFGTILE 235
L EI + + + FS FG IL+
Sbjct: 107 LDPEIDEKLLYDTFSAFGVILQ 128
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 109
+ DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 132 IMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 169
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 35.9 bits (79), Expect = 0.024
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +2
Query: 113 KKVDPKKAKA--RHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
K+ KKAK + ++ + L+ + S+D+++ F++FG +LEV +P
Sbjct: 100 KEPKAKKAKVADKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIP 146
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 35.9 bits (79), Expect = 0.024
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH------GKIFVGG 169
D TG+ +G+ F+ F + E D + + K + KA A + IF+G
Sbjct: 47 DRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGN 106
Query: 170 LTSEISDDEIRNFFSEFGTILE 235
L EI + + + FS FG IL+
Sbjct: 107 LDPEIDEKLLYDTFSAFGVILQ 128
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 109
+ DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 132 IMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 169
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 35.9 bits (79), Expect = 0.024
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH------GKIFVGG 169
D TG+ +G+ F+ F + E D + + K + KA A + IF+G
Sbjct: 47 DRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGN 106
Query: 170 LTSEISDDEIRNFFSEFGTILE 235
L EI + + + FS FG IL+
Sbjct: 107 LDPEIDEKLLYDTFSAFGVILQ 128
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 109
+ DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 132 IMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 169
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 35.9 bits (79), Expect = 0.024
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH------GKIFVGG 169
D TG+ +G+ F+ F + E D + + K + KA A + IF+G
Sbjct: 47 DRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGN 106
Query: 170 LTSEISDDEIRNFFSEFGTILE 235
L EI + + + FS FG IL+
Sbjct: 107 LDPEIDEKLLYDTFSAFGVILQ 128
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 109
+ DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 132 IMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 169
>AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 35.9 bits (79), Expect = 0.024
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH------GKIFVGG 169
D TG+ +G+ F+ F + E D + + K + KA A + IF+G
Sbjct: 4 DRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGN 63
Query: 170 LTSEISDDEIRNFFSEFGTILE 235
L EI + + + FS FG IL+
Sbjct: 64 LDPEIDEKLLYDTFSAFGVILQ 85
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 109
+ DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 89 IMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 126
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 35.9 bits (79), Expect = 0.024
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH------GKIFVGG 169
D TG+ +G+ F+ F + E D + + K + KA A + IF+G
Sbjct: 47 DRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGN 106
Query: 170 LTSEISDDEIRNFFSEFGTILE 235
L EI + + + FS FG IL+
Sbjct: 107 LDPEIDEKLLYDTFSAFGVILQ 128
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 109
+ DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 132 IMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 169
>AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 35.9 bits (79), Expect = 0.024
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH------GKIFVGG 169
D TG+ +G+ F+ F + E D + + K + KA A + IF+G
Sbjct: 4 DRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGN 63
Query: 170 LTSEISDDEIRNFFSEFGTILE 235
L EI + + + FS FG IL+
Sbjct: 64 LDPEIDEKLLYDTFSAFGVILQ 85
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 109
+ DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 89 IMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 126
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 35.9 bits (79), Expect = 0.024
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHT-INNKKVDPKKAKARH------GKIFVGG 169
D TG+ +G+ F+ F + E D + + + K + KA A + IF+G
Sbjct: 47 DRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKASAHNKNLDVGANIFIGN 106
Query: 170 LTSEISDDEIRNFFSEFGTILE 235
L EI + + + FS FG IL+
Sbjct: 107 LDPEIDEKLLYDTFSAFGVILQ 128
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 109
+ DP+TG S+G+AFI F + ++ D + A G++ N
Sbjct: 132 IMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 169
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 35.9 bits (79), Expect = 0.024
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +2
Query: 113 KKVDPKKAKA--RHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
K+ KKAK + ++ + L+ + S+D+++ F++FG +LEV +P
Sbjct: 100 KEPKAKKAKVADKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIP 146
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 35.9 bits (79), Expect = 0.024
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +2
Query: 113 KKVDPKKAKA--RHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
K+ KKAK + ++ + L+ + S+D+++ F++FG +LEV +P
Sbjct: 100 KEPKAKKAKVADKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIP 146
>AF026564-1|AAC16916.1| 318|Homo sapiens RNA binding protein
protein.
Length = 318
Score = 35.9 bits (79), Expect = 0.024
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 146 HGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
HGK+F+GGL E ++ ++ F++ G +LEV
Sbjct: 7 HGKLFIGGLNREANEKVLKEVFAKHGPLLEV 37
>U77476-1|AAB84361.1| 295|Homo sapiens DAZLA protein protein.
Length = 295
Score = 35.5 bits (78), Expect = 0.031
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 131 KAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+ K +FVGG+ + + EIR+FF+ +G++ EV++
Sbjct: 34 EGKIMPNTVFVGGIDVRMDEXEIRSFFARYGSVXEVKI 71
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K + DP K+ G +F+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 34.3 bits (75), Expect = 0.072
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Frame = +2
Query: 29 SRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK-------------IFVG 166
S+G+AF+ F+ E+ DK + +N++KV + K+R + +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
E+ D+ ++ FS+FG L V++
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 330 GRSKGFGFVCFSSPEEATKAV 350
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K + DP K+ G +F+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 34.3 bits (75), Expect = 0.072
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Frame = +2
Query: 29 SRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK-------------IFVG 166
S+G+AF+ F+ E+ DK + +N++KV + K+R + +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
E+ D+ ++ FS+FG L V++
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 330 GRSKGFGFVCFSSPEEATKAV 350
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K + DP K+ G +F+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 34.3 bits (75), Expect = 0.072
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Frame = +2
Query: 29 SRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK-------------IFVG 166
S+G+AF+ F+ E+ DK + +N++KV + K+R + +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
E+ D+ ++ FS+FG L V++
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 330 GRSKGFGFVCFSSPEEATKAV 350
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K + DP K+ G +F+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 34.3 bits (75), Expect = 0.072
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Frame = +2
Query: 29 SRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK-------------IFVG 166
S+G+AF+ F+ E+ DK + +N++KV + K+R + +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
E+ D+ ++ FS+FG L V++
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 330 GRSKGFGFVCFSSPEEATKAV 350
>AY675556-1|AAV91783.1| 474|Homo sapiens myocyte enhancer factor
2D/deleted in azoospermia associated protein 1 fusion p
protein.
Length = 474
Score = 35.5 bits (78), Expect = 0.031
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 35 GFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 154
GF FI F+ +S+D+ + H I KKV+ K+A+ R K
Sbjct: 222 GFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSK 261
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K + DP K+ G +F+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 34.3 bits (75), Expect = 0.072
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Frame = +2
Query: 29 SRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK-------------IFVG 166
S+G+AF+ F+ E+ DK + +N++KV + K+R + +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
E+ D+ ++ FS+FG L V++
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 330 GRSKGFGFVCFSSPEEATKAV 350
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K + DP K+ G +F+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 34.3 bits (75), Expect = 0.072
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Frame = +2
Query: 29 SRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK-------------IFVG 166
S+G+AF+ F+ E+ DK + +N++KV + K+R + +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
E+ D+ ++ FS+FG L V++
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 330 GRSKGFGFVCFSSPEEATKAV 350
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K + DP K+ G +F+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 34.3 bits (75), Expect = 0.072
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Frame = +2
Query: 29 SRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK-------------IFVG 166
S+G+AF+ F+ E+ DK + +N++KV + K+R + +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
E+ D+ ++ FS+FG L V++
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 330 GRSKGFGFVCFSSPEEATKAV 350
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K + DP K+ G +F+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 34.3 bits (75), Expect = 0.072
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Frame = +2
Query: 29 SRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK-------------IFVG 166
S+G+AF+ F+ E+ DK + +N++KV + K+R + +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
E+ D+ ++ FS+FG L V++
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 330 GRSKGFGFVCFSSPEEATKAV 350
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K + DP K+ G +F+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 34.3 bits (75), Expect = 0.072
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Frame = +2
Query: 29 SRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK-------------IFVG 166
S+G+AF+ F+ E+ DK + +N++KV + K+R + +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
E+ D+ ++ FS+FG L V++
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 330 GRSKGFGFVCFSSPEEATKAV 350
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K + DP K+ G +F+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 34.3 bits (75), Expect = 0.072
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Frame = +2
Query: 29 SRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK-------------IFVG 166
S+G+AF+ F+ E+ DK + +N++KV + K+R + +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
E+ D+ ++ FS+FG L V++
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 330 GRSKGFGFVCFSSPEEATKAV 350
>AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein.
Length = 562
Score = 35.5 bits (78), Expect = 0.031
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEIS 187
DP TG +RG+AF+ F E+ + V H I + K + ++FVG + +
Sbjct: 196 DPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 255
Query: 188 DDEIRNFFSE 217
++I FS+
Sbjct: 256 KEQILEEFSQ 265
>U66726-1|AAB39935.1| 295|Homo sapiens germline specific RNA
binding protein protein.
Length = 295
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 131 KAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+ K +FVGG+ + + EIR+FF+ +G++ EV++
Sbjct: 34 EGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKI 71
>U66078-1|AAB63596.1| 295|Homo sapiens DAZLA protein.
Length = 295
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 131 KAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+ K +FVGG+ + + EIR+FF+ +G++ EV++
Sbjct: 34 EGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKI 71
>U65918-1|AAC50813.1| 295|Homo sapiens RNA binding protein protein.
Length = 295
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 131 KAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+ K +FVGG+ + + EIR+FF+ +G++ EV++
Sbjct: 34 EGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKI 71
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG 151
+ TD TG S+GF F+ F + E + M GE N +D K K G
Sbjct: 600 IVTDRETGSSKGFGFVDFNSEEDAKEAMEDGEIDGNKVTLDWAKPKGEGG 649
>EF055888-1|ABK58591.1| 80|Homo sapiens DAZL protein.
Length = 80
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 131 KAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+ K +FVGG+ + + EIR+FF+ +G++ EV++
Sbjct: 33 EGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKI 70
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
R GK+F+GGL +E ++ + F ++G I+EV
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVEV 37
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 139
D T +SRGFAF+ F++P D AA + +N K +D K K
Sbjct: 42 DRETNKSRGFAFVTFESP--ADAKDAARD--MNGKSLDGKAIK 80
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 35.1 bits (77), Expect = 0.041
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K + DP K+ G +F+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLDKSIDNKVLYDTFSAFGNILSCKV 130
Score = 34.3 bits (75), Expect = 0.072
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Frame = +2
Query: 29 SRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKARHGK-------------IFVG 166
S+G+AF+ F+ E+ DK + +N++KV + K+R + +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
E+ D+ ++ FS+FG L V++
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVM 85
GRS+GF F+ F +PE K +
Sbjct: 330 GRSKGFGFVCFSSPEEATKAV 350
>BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein.
Length = 410
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEIS 187
DP TG +RG+AF+ F E+ + V H I + K + ++FVG + +
Sbjct: 44 DPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 103
Query: 188 DDEIRNFFSE 217
++I FS+
Sbjct: 104 KEQILEEFSK 113
>BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein.
Length = 527
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEIS 187
DP TG +RG+AF+ F E+ + V H I + K + ++FVG + +
Sbjct: 196 DPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 255
Query: 188 DDEIRNFFSE 217
++I FS+
Sbjct: 256 KEQILEEFSK 265
>BC027595-1|AAH27595.1| 295|Homo sapiens deleted in
azoospermia-like protein.
Length = 295
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 131 KAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+ K +FVGG+ + + EIR+FF+ +G++ EV++
Sbjct: 34 EGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKI 71
>BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for
IMAGE:4079825) protein.
Length = 453
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEIS 187
DP TG +RG+AF+ F E+ + V H I + K + ++FVG + +
Sbjct: 232 DPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 291
Query: 188 DDEIRNFFSE 217
++I FS+
Sbjct: 292 KEQILEEFSK 301
>BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein.
Length = 417
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEIS 187
DP TG +RG+AF+ F E+ + V H I + K + ++FVG + +
Sbjct: 196 DPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 255
Query: 188 DDEIRNFFSE 217
++I FS+
Sbjct: 256 KEQILEEFSK 265
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
R GK+F+GGL +E ++ + F ++G I+EV
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVEV 37
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 139
D T +SRGFAF+ F++P D AA + +N K +D K K
Sbjct: 42 DRETNKSRGFAFVTFESP--ADAKDAARD--MNGKSLDGKAIK 80
>AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein.
Length = 561
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEIS 187
DP TG +RG+AF+ F E+ + V H I + K + ++FVG + +
Sbjct: 196 DPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 255
Query: 188 DDEIRNFFSE 217
++I FS+
Sbjct: 256 KEQILEEFSK 265
>AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein.
Length = 588
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEIS 187
DP TG +RG+AF+ F E+ + V H I + K + ++FVG + +
Sbjct: 196 DPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 255
Query: 188 DDEIRNFFSE 217
++I FS+
Sbjct: 256 KEQILEEFSK 265
>AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein.
Length = 623
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEIS 187
DP TG +RG+AF+ F E+ + V H I + K + ++FVG + +
Sbjct: 196 DPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 255
Query: 188 DDEIRNFFSE 217
++I FS+
Sbjct: 256 KEQILEEFSK 265
>AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeceptor 116 (GPR116) protein.
Length = 129
Score = 35.1 bits (77), Expect = 0.041
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K + DP K+ G +F+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTIL 232
L I + + + FS FG IL
Sbjct: 105 NLDKSIDNKALYDTFSAFGNIL 126
>AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleg frame 148 protein.
Length = 129
Score = 35.1 bits (77), Expect = 0.041
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ F+ P ++ + I K + DP K+ G +F+
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTIL 232
L I + + + FS FG IL
Sbjct: 105 NLDKSIDNKALYDTFSAFGNIL 126
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
R GK+F+GGL +E ++ + F ++G I+EV
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVEV 37
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 139
D T +SRGFAF+ F++P D AA + +N K +D K K
Sbjct: 42 DRETNKSRGFAFVTFESP--ADAKDAARD--MNGKSLDGKAIK 80
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
R GK+F+GGL +E ++ + F ++G I+EV
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVEV 37
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 139
D T +SRGFAF+ F++P D AA + +N K +D K K
Sbjct: 42 DRETNKSRGFAFVTFESP--ADAKDAARD--MNGKSLDGKAIK 80
>AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein.
Length = 623
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEIS 187
DP TG +RG+AF+ F E+ + V H I + K + ++FVG + +
Sbjct: 196 DPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 255
Query: 188 DDEIRNFFSE 217
++I FS+
Sbjct: 256 KEQILEEFSK 265
>AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein.
Length = 562
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEIS 187
DP TG +RG+AF+ F E+ + V H I + K + ++FVG + +
Sbjct: 196 DPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 255
Query: 188 DDEIRNFFSE 217
++I FS+
Sbjct: 256 KEQILEEFSK 265
>AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 623
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEIS 187
DP TG +RG+AF+ F E+ + V H I + K + ++FVG + +
Sbjct: 196 DPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 255
Query: 188 DDEIRNFFSE 217
++I FS+
Sbjct: 256 KEQILEEFSK 265
>AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein.
Length = 623
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEIS 187
DP TG +RG+AF+ F E+ + V H I + K + ++FVG + +
Sbjct: 196 DPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 255
Query: 188 DDEIRNFFSE 217
++I FS+
Sbjct: 256 KEQILEEFSK 265
>AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 534
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEIS 187
DP TG +RG+AF+ F E+ + V H I + K + ++FVG + +
Sbjct: 168 DPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 227
Query: 188 DDEIRNFFSE 217
++I FS+
Sbjct: 228 KEQILEEFSK 237
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 34.7 bits (76), Expect = 0.055
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+F+G L E ++ EIR+ F ++G +LE ++
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDI 33
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 110 NKKVDPKKAKARHG-KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
N V+ K K++ K+ VG ++ ++ E+R F E+G ++E ++
Sbjct: 64 NINVEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECDI 109
>BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein.
Length = 143
Score = 34.7 bits (76), Expect = 0.055
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+F+G L E ++ EIR+ F ++G +LE ++
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDI 33
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 110 NKKVDPKKAKARHG-KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
N V+ K K++ K+ VG ++ ++ E+R F E+G ++E ++
Sbjct: 64 NINVEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECDI 109
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 34.7 bits (76), Expect = 0.055
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+F+G L E ++ EIR+ F ++G +LE ++
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDI 33
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 110 NKKVDPKKAKARHG-KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
N V+ K K++ K+ VG ++ ++ E+R F E+G ++E ++
Sbjct: 64 NINVEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECDI 109
>BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein.
Length = 177
Score = 34.7 bits (76), Expect = 0.055
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+F+G L E ++ EIR+ F ++G +LE ++
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDI 33
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 110 NKKVDPKKAKARHG-KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
N V+ K K++ K+ VG ++ ++ E+R F E+G ++E ++
Sbjct: 64 NINVEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECDI 109
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 34.7 bits (76), Expect = 0.055
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+F+G L E ++ EIR+ F ++G +LE ++
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDI 33
Score = 30.7 bits (66), Expect = 0.89
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +2
Query: 26 RSRGFAFIVFK--APESIDKVMAAGEHTIN-NKKVDPKKAKARHGKIFVGGLTSEISDDE 196
++ GF I K A ++I + H +N N + K+KA K+ VG ++ ++ E
Sbjct: 35 KNYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEASKNKSKAST-KLHVGNISPTCTNQE 93
Query: 197 IRNFFSEFGTILEVEM 244
+R F E+G ++E ++
Sbjct: 94 LRAKFEEYGPVIECDI 109
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 34.7 bits (76), Expect = 0.055
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+F+G L E ++ EIR+ F ++G +LE ++
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDI 33
Score = 30.7 bits (66), Expect = 0.89
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +2
Query: 26 RSRGFAFIVFK--APESIDKVMAAGEHTIN-NKKVDPKKAKARHGKIFVGGLTSEISDDE 196
++ GF I K A ++I + H +N N + K+KA K+ VG ++ ++ E
Sbjct: 35 KNYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEASKNKSKAST-KLHVGNISPTCTNQE 93
Query: 197 IRNFFSEFGTILEVEM 244
+R F E+G ++E ++
Sbjct: 94 LRAKFEEYGPVIECDI 109
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 34.7 bits (76), Expect = 0.055
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K+F+G L E ++ EIR+ F ++G +LE ++
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDI 33
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 110 NKKVDPKKAKARHG-KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
N V+ K K++ K+ VG ++ ++ E+R F E+G ++E ++
Sbjct: 64 NINVEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECDI 109
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
R GK+F+GGL +E ++ + F ++G I+EV
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEV 37
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 139
D T +SRGFAF+ F++P D AA + +N K +D K K
Sbjct: 42 DRETNKSRGFAFVTFESP--ADAKDAARD--MNGKSLDGKAIK 80
>BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein.
Length = 243
Score = 34.3 bits (75), Expect = 0.072
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ ++ P + + I + V DP K+ G +F+
Sbjct: 79 DKITRRSLGYAYVNYQQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIK 138
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + N FS FG IL ++
Sbjct: 139 NLGKTIDNKALYNIFSAFGNILSCKV 164
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
R GK+F+GGL +E ++ + F ++G I+EV
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEV 37
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 139
D T +SRGFAF+ F++P D AA + +N K +D K K
Sbjct: 42 DRETNKSRGFAFVTFESP--ADAKDAARD--MNGKSLDGKAIK 80
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
R GK+F+GGL +E ++ + F ++G I+EV
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEV 37
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 139
D T +SRGFAF+ F++P D AA + +N K +D K K
Sbjct: 42 DRETNKSRGFAFVTFESP--ADAKDAARD--MNGKSLDGKAIK 80
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
R GK+F+GGL +E ++ + F ++G I+EV
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEV 37
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 139
D T +SRGFAF+ F++P D AA + +N K +D K K
Sbjct: 42 DRETNKSRGFAFVTFESP--ADAKDAARD--MNGKSLDGKAIK 80
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
R GK+F+GGL +E ++ + F ++G I+EV
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEV 37
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 139
D T +SRGFAF+ F++P D AA + +N K +D K K
Sbjct: 42 DRETNKSRGFAFVTFESP--ADAKDAARD--MNGKSLDGKAIK 80
>AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340530)
protein.
Length = 200
Score = 34.3 bits (75), Expect = 0.072
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ ++ P + + I + V DP K+ G +F+
Sbjct: 36 DKITRRSLGYAYVNYQQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIK 95
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + N FS FG IL ++
Sbjct: 96 NLGKTIDNKALYNIFSAFGNILSCKV 121
>AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340529)
protein.
Length = 200
Score = 34.3 bits (75), Expect = 0.072
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKV-------DPKKAKARHGKIFVG 166
D T RS G+A++ ++ P + + I + V DP K+ G +F+
Sbjct: 36 DKITRRSLGYAYVNYQQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIK 95
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + N FS FG IL ++
Sbjct: 96 NLGKTIDNKALYNIFSAFGNILSCKV 121
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 34.3 bits (75), Expect = 0.072
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKV-------MAAGEHT-INNKKVDPKKAKARHGKIFVG 166
D T RS G+A+I F+ P ++ M G+ I + DP K+ G IF+
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLEDSIDNKALYDTFSTFGNILSCKV 130
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 34.3 bits (75), Expect = 0.072
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKV-------MAAGEHT-INNKKVDPKKAKARHGKIFVG 166
D T RS G+A+I F+ P ++ M G+ I + DP K+ G IF+
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLEDSIDNKALYDTFSTFGNILSCKV 130
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 34.3 bits (75), Expect = 0.072
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKV-------MAAGEHT-INNKKVDPKKAKARHGKIFVG 166
D T RS G+A+I F+ P ++ M G+ I + DP K+ G IF+
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLEDSIDNKALYDTFSTFGNILSCKV 130
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 34.3 bits (75), Expect = 0.072
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKV-------MAAGEHT-INNKKVDPKKAKARHGKIFVG 166
D T RS G+A+I F+ P ++ M G+ I + DP K+ G IF+
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIK 104
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 105 NLEDSIDNKALYDTFSTFGNILSCKV 130
>AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens
cDNA FLJ38696 fis, clone KIDNE2001931, highly similar to
HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN G. ).
Length = 378
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
R GK+F+GGL +E ++ + F ++G I+EV
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEV 37
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
R GK+F+GGL +E ++ + F ++G I+EV
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEV 37
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 139
D T +SRGFAF+ F++P D AA + +N K +D K K
Sbjct: 42 DRETNKSRGFAFVTFESP--ADAKDAARD--MNGKSLDGKAIK 80
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 34.3 bits (75), Expect = 0.072
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Frame = +2
Query: 26 RSRGFAFIVFKAPESIDKVMAA--GEHTIN--NKKVDPKKA----KARHGKIFVGGLTSE 181
R G AF+ + A +S K +A + T+ N+ + K A + K+FVG L +
Sbjct: 22 RHMGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQ 81
Query: 182 ISDDEIRNFFSEFGTILE 235
+D+++R F FGTI E
Sbjct: 82 QTDEDVRKMFEPFGTIDE 99
>BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA binding
protein (Drosophila) protein.
Length = 484
Score = 33.9 bits (74), Expect = 0.096
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 146 HGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
H K+FVG L + S+D++R F FG I E
Sbjct: 150 HRKLFVGMLNKQQSEDDVRRLFEAFGNIEE 179
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEV 238
K+F+G + + + +++ F EFG I E+
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYEL 83
>BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA binding
protein (Drosophila) protein.
Length = 484
Score = 33.9 bits (74), Expect = 0.096
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 146 HGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
H K+FVG L + S+D++R F FG I E
Sbjct: 150 HRKLFVGMLNKQQSEDDVRRLFEAFGNIEE 179
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEV 238
K+F+G + + + +++ F EFG I E+
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYEL 83
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
GK+FVGGL+ + ++ + FS++G I EV
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISEV 35
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFK-APESIDKVMAAGEHTINNKKV 121
V D T RSRGF F+ F+ ++ D +MA +++ +++
Sbjct: 37 VVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
GK+FVGGL+ + ++ + FS++G I EV
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISEV 35
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFK-APESIDKVMAAGEHTINNKKV 121
V D T RSRGF F+ F+ ++ D +MA +++ +++
Sbjct: 37 VVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77
>BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 2 protein.
Length = 449
Score = 33.5 bits (73), Expect = 0.13
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++FVG L +I ++E++ FF FG ++E+ +
Sbjct: 299 QLFVGNLPHDIDENELKEFFMSFGNVVELRI 329
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
GK+FVGGL+ + ++ + FS++G I EV
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISEV 35
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFK-APESIDKVMAAGEHTINNKKV 121
V D T RSRGF F+ F+ ++ D +MA +++ +++
Sbjct: 37 VVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
GK+FVGGL+ + ++ + FS++G I EV
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISEV 35
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFK-APESIDKVMAAGEHTINNKKV 121
V D T RSRGF F+ F+ ++ D +MA +++ +++
Sbjct: 37 VVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77
>AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ46566 fis, clone THYMU3040829, moderately
similar to Cold-inducible RNA-binding protein. ).
Length = 135
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
GK+FVGGL+ + ++ + FS++G I EV
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISEV 35
>AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein
isoform G3BP-2a protein.
Length = 482
Score = 33.5 bits (73), Expect = 0.13
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++FVG L +I ++E++ FF FG ++E+ +
Sbjct: 332 QLFVGNLPHDIDENELKEFFMSFGNVVELRI 362
>AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding
protein G3BP2 protein.
Length = 449
Score = 33.5 bits (73), Expect = 0.13
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++FVG L +I ++E++ FF FG ++E+ +
Sbjct: 299 QLFVGNLPHDIDENELKEFFMSFGNVVELRI 329
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
GK+FVGGL+ + ++ + FS++G I EV
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISEV 35
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFK-APESIDKVMAAGEHTINNKKV 121
V D T RSRGF F+ F+ ++ D +MA +++ +++
Sbjct: 37 VVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 149 GKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
GK+FVGGL+ + ++ + FS++G I EV
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISEV 35
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFK-APESIDKVMAAGEHTINNKKV 121
V D T RSRGF F+ F+ ++ D +MA +++ +++
Sbjct: 37 VVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77
>AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein.
Length = 490
Score = 33.5 bits (73), Expect = 0.13
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++FVG L +I ++E++ FF FG ++E+ +
Sbjct: 340 QLFVGNLPHDIDENELKEFFMSFGNVVELRI 370
>U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein.
Length = 157
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 140 ARHGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
+ GK+FVGGL + + + FS FG I EV
Sbjct: 3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEV 35
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 148
V D T RSRGF FI F PE M A +N + +D ++ + H
Sbjct: 37 VVKDRETQRSRGFGFITFTNPEHASVAMRA----MNGESLDGRQIRVDH 81
>BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1,
RRM) protein 3 protein.
Length = 157
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 140 ARHGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
+ GK+FVGGL + + + FS FG I EV
Sbjct: 3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEV 35
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 148
V D T RSRGF FI F PE M A +N + +D ++ + H
Sbjct: 37 VVKDRETQRSRGFGFITFTNPEHASVAMRA----MNGESLDGRQIRVDH 81
>AF141345-1|AAG49448.1| 213|Homo sapiens LYST-interacting protein
LIP9 protein.
Length = 213
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +2
Query: 86 AAGEHTINNKKVDPKKAKARHG----KIFVGGLTSEISDDEIRNFFSEFGTILE 235
A E + ++ DP +A + K+FVG L + S+D++R F FG I E
Sbjct: 10 ARAEDSARDEPADPGEACGQRXRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIEE 63
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 32.7 bits (71), Expect = 0.22
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK--VDPKKAKA 142
D T + +GFAF+ ++ PE+ ++ VM G + I + +D +A
Sbjct: 145 DSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEA 204
Query: 143 R-HGKIFVGGLTSEISDDEIRNFFSEFGTI 229
R +I+V + ++SDD+I++ F FG I
Sbjct: 205 RAFNRIYVASVHQDLSDDDIKSVFEAFGKI 234
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 32.7 bits (71), Expect = 0.22
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK--VDPKKAKA 142
D T + +GFAF+ ++ PE+ ++ VM G + I + +D +A
Sbjct: 163 DSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEA 222
Query: 143 R-HGKIFVGGLTSEISDDEIRNFFSEFGTI 229
R +I+V + ++SDD+I++ F FG I
Sbjct: 223 RAFNRIYVASVHQDLSDDDIKSVFEAFGKI 252
>BX538213-1|CAD98072.1| 729|Homo sapiens hypothetical protein
protein.
Length = 729
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
K+FVGGL +I +DEI F FG ++ V+ P
Sbjct: 473 KVFVGGLPPDIDEDEITASFRRFGPLI-VDWP 503
>BC117150-1|AAI17151.1| 729|Homo sapiens cytoplasmic
polyadenylation element binding protein 4 protein.
Length = 729
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
K+FVGGL +I +DEI F FG ++ V+ P
Sbjct: 473 KVFVGGLPPDIDEDEITASFRRFGPLI-VDWP 503
>BC036899-1|AAH36899.1| 322|Homo sapiens CPEB4 protein protein.
Length = 322
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
K+FVGGL +I +DEI F FG ++ V+ P
Sbjct: 66 KVFVGGLPPDIDEDEITASFRRFGPLI-VDWP 96
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 32.7 bits (71), Expect = 0.22
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK--VDPKKAKA 142
D T + +GFAF+ ++ PE+ ++ VM G + I + +D +A
Sbjct: 120 DSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEA 179
Query: 143 R-HGKIFVGGLTSEISDDEIRNFFSEFGTI 229
R +I+V + ++SDD+I++ F FG I
Sbjct: 180 RAFNRIYVASVHQDLSDDDIKSVFEAFGKI 209
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 32.7 bits (71), Expect = 0.22
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK--VDPKKAKA 142
D T + +GFAF+ ++ PE+ ++ VM G + I + +D +A
Sbjct: 120 DSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEA 179
Query: 143 R-HGKIFVGGLTSEISDDEIRNFFSEFGTI 229
R +I+V + ++SDD+I++ F FG I
Sbjct: 180 RAFNRIYVASVHQDLSDDDIKSVFEAFGKI 209
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 32.7 bits (71), Expect = 0.22
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK--VDPKKAKA 142
D T + +GFAF+ ++ PE+ ++ VM G + I + +D +A
Sbjct: 103 DSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEA 162
Query: 143 R-HGKIFVGGLTSEISDDEIRNFFSEFGTI 229
R +I+V + ++SDD+I++ F FG I
Sbjct: 163 RAFNRIYVASVHQDLSDDDIKSVFEAFGKI 192
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 32.7 bits (71), Expect = 0.22
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK--VDPKKAKA 142
D T + +GFAF+ ++ PE+ ++ VM G + I + +D +A
Sbjct: 146 DSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEA 205
Query: 143 R-HGKIFVGGLTSEISDDEIRNFFSEFGTI 229
R +I+V + ++SDD+I++ F FG I
Sbjct: 206 RAFNRIYVASVHQDLSDDDIKSVFEAFGKI 235
>AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ44762 fis, clone BRACE3031743, moderately
similar to Homo sapiens bruno-like 4, RNA binding
protein. ).
Length = 250
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 116 KVDPKKAKARHG-KIFVGGLTSEISDDEIRNFFSEFGTILE 235
+V P +++R K+FVG L + S+D++R F FG I E
Sbjct: 6 QVKPADSESRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIEE 46
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 32.7 bits (71), Expect = 0.22
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK--VDPKKAKA 142
D T + +GFAF+ ++ PE+ ++ VM G + I + +D +A
Sbjct: 146 DSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEA 205
Query: 143 R-HGKIFVGGLTSEISDDEIRNFFSEFGTI 229
R +I+V + ++SDD+I++ F FG I
Sbjct: 206 RAFNRIYVASVHQDLSDDDIKSVFEAFGKI 235
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 32.7 bits (71), Expect = 0.22
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK--VDPKKAKA 142
D T + +GFAF+ ++ PE+ ++ VM G + I + +D +A
Sbjct: 160 DSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEA 219
Query: 143 R-HGKIFVGGLTSEISDDEIRNFFSEFGTI 229
R +I+V + ++SDD+I++ F FG I
Sbjct: 220 RAFNRIYVASVHQDLSDDDIKSVFEAFGKI 249
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 32.7 bits (71), Expect = 0.22
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK--VDPKKAKA 142
D T + +GFAF+ ++ PE+ ++ VM G + I + +D +A
Sbjct: 163 DSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEA 222
Query: 143 R-HGKIFVGGLTSEISDDEIRNFFSEFGTI 229
R +I+V + ++SDD+I++ F FG I
Sbjct: 223 RAFNRIYVASVHQDLSDDDIKSVFEAFGKI 252
>AB051460-1|BAB21764.1| 712|Homo sapiens KIAA1673 protein protein.
Length = 712
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
K+FVGGL +I +DEI F FG ++ V+ P
Sbjct: 456 KVFVGGLPPDIDEDEITASFRRFGPLI-VDWP 486
>X75315-1|CAA53064.1| 230|Homo sapiens SEB4B protein.
Length = 230
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 128 KKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
KK KIFVGGL +D +R +F FG I E
Sbjct: 18 KKKGTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEE 53
>BC105925-1|AAI05926.1| 562|Homo sapiens CPEB2 protein protein.
Length = 562
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
K+FVGGL +I +DEI F FG ++ V+ P
Sbjct: 306 KVFVGGLPPDIDEDEITASFRRFGPLV-VDWP 336
>BC103942-1|AAI03943.1| 575|Homo sapiens CPEB2 protein protein.
Length = 575
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
K+FVGGL +I +DEI F FG ++ V+ P
Sbjct: 319 KVFVGGLPPDIDEDEITASFRRFGPLV-VDWP 349
>BC103941-1|AAI03942.1| 568|Homo sapiens CPEB2 protein protein.
Length = 568
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
K+FVGGL +I +DEI F FG ++ V+ P
Sbjct: 312 KVFVGGLPPDIDEDEITASFRRFGPLV-VDWP 342
>BC103940-1|AAI03941.1| 589|Homo sapiens cytoplasmic
polyadenylation element binding protein 2 protein.
Length = 589
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
K+FVGGL +I +DEI F FG ++ V+ P
Sbjct: 333 KVFVGGLPPDIDEDEITASFRRFGPLV-VDWP 363
>BC103939-1|AAI03940.2| 548|Homo sapiens CPEB2 protein protein.
Length = 548
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
K+FVGGL +I +DEI F FG ++ V+ P
Sbjct: 292 KVFVGGLPPDIDEDEITASFRRFGPLV-VDWP 322
>BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 32.3 bits (70), Expect = 0.29
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +2
Query: 26 RSRGFAFIVFKAPE-SIDKVMAAGEHTINNKKVD---PKKAKARHGKIFVGGLTSEISDD 193
R R + F P S++ + AG ++VD P+ + + +F+G L +++
Sbjct: 329 RERDYPFYERVRPAYSLEPRVGAGAGAAPFREVDEISPEDDQRANRTLFLGNLDITVTES 388
Query: 194 EIRNFFSEFGTILEVEM 244
++R F FG I EV++
Sbjct: 389 DLRRAFDRFGVITEVDI 405
>BC103493-1|AAI03494.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 32.3 bits (70), Expect = 0.29
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +2
Query: 26 RSRGFAFIVFKAPE-SIDKVMAAGEHTINNKKVD---PKKAKARHGKIFVGGLTSEISDD 193
R R + F P S++ + AG ++VD P+ + + +F+G L +++
Sbjct: 329 RERDYPFYERVRPAYSLEPRVGAGAGAAPFREVDEISPEDDQRANRTLFLGNLDITVTES 388
Query: 194 EIRNFFSEFGTILEVEM 244
++R F FG I EV++
Sbjct: 389 DLRRAFDRFGVITEVDI 405
>BC098140-1|AAH98140.1| 969|Homo sapiens RBM15 protein protein.
Length = 969
Score = 32.3 bits (70), Expect = 0.29
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +2
Query: 26 RSRGFAFIVFKAPE-SIDKVMAAGEHTINNKKVD---PKKAKARHGKIFVGGLTSEISDD 193
R R + F P S++ + AG ++VD P+ + + +F+G L +++
Sbjct: 329 RERDYPFYERVRPAYSLEPRVGAGAGAAPFREVDEISPEDDQRANRTLFLGNLDITVTES 388
Query: 194 EIRNFFSEFGTILEVEM 244
++R F FG I EV++
Sbjct: 389 DLRRAFDRFGVITEVDI 405
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,308,313
Number of Sequences: 237096
Number of extensions: 648652
Number of successful extensions: 2617
Number of sequences better than 10.0: 442
Number of HSP's better than 10.0 without gapping: 2049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2512
length of database: 76,859,062
effective HSP length: 61
effective length of database: 62,396,206
effective search space used: 1372716532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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