Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6j23
(252 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 81 1e-16
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 81 1e-16
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 66 4e-12
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 66 4e-12
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 59 4e-10
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 59 4e-10
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 59 4e-10
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 59 4e-10
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 59 4e-10
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 44 1e-05
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 44 1e-05
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 44 1e-05
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 40 2e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.004
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.004
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.004
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 35 0.007
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 35 0.007
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 35 0.009
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 34 0.012
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 34 0.015
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 34 0.015
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 34 0.015
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 34 0.015
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 34 0.015
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 34 0.015
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 34 0.015
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 34 0.015
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 34 0.015
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 33 0.020
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 33 0.020
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 33 0.020
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 33 0.020
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 33 0.020
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 33 0.020
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 33 0.020
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 33 0.020
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 33 0.027
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.027
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 33 0.027
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.027
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 33 0.035
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 33 0.035
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 33 0.035
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.035
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 33 0.035
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 32 0.062
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 32 0.062
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.062
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 32 0.062
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 32 0.062
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 32 0.062
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 32 0.062
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 32 0.062
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 31 0.11
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 31 0.11
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 31 0.11
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 31 0.11
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 31 0.14
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 29 0.33
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 29 0.33
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 29 0.33
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 0.33
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 29 0.33
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 29 0.44
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 29 0.44
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 29 0.44
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 29 0.44
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 29 0.44
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 28 0.76
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 1.0
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 27 1.3
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 27 1.8
CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical ... 27 1.8
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 27 2.3
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 27 2.3
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 26 3.1
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 26 3.1
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 26 3.1
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 26 3.1
Z81124-6|CAB03375.1| 335|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 26 4.1
U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical p... 26 4.1
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 26 4.1
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 26 4.1
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 26 4.1
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 26 4.1
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z68161-10|CAN86582.1| 705|Caenorhabditis elegans Hypothetical p... 25 5.4
Z68161-5|CAA92299.2| 764|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z68161-4|CAD89735.1| 781|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 25 5.4
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 25 5.4
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 25 5.4
U50301-13|AAB37054.2| 549|Caenorhabditis elegans Hypothetical p... 25 5.4
AY185494-1|AAO26317.1| 764|Caenorhabditis elegans poly ADP-ribo... 25 5.4
AY185493-1|AAO26316.1| 781|Caenorhabditis elegans poly ADP-ribo... 25 5.4
AF016425-12|AAB65336.1| 190|Caenorhabditis elegans Histone h1 l... 25 5.4
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 25 7.1
U80842-8|AAB37951.1| 244|Caenorhabditis elegans Hypothetical pr... 25 7.1
U41019-3|AAA82329.3| 531|Caenorhabditis elegans Sop-2 related (... 25 7.1
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 25 9.4
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 25 9.4
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 80.6 bits (190), Expect = 1e-16
Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-KIFVGGLTS 178
VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R K+FVGGL S
Sbjct: 60 VKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPS 119
Query: 179 EISDDEIRNFFSEFGTILEVEMPF 250
+ S+ ++R+ F +FG + ++E PF
Sbjct: 120 DYSEQDLRSHFEQFGKVDDIEWPF 143
Score = 39.1 bits (87), Expect = 4e-04
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 166
D T R FAFIVF+ ES DK + + T ++ D KKA GK F G
Sbjct: 144 DKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKA-VPQGKRFPG 194
Score = 33.9 bits (74), Expect = 0.015
Identities = 9/33 (27%), Positives = 26/33 (78%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEMPF 250
KIFVGG++ E++++++ + F+++G + + ++ +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKY 62
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 80.6 bits (190), Expect = 1e-16
Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-KIFVGGLTS 178
VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R K+FVGGL S
Sbjct: 60 VKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPS 119
Query: 179 EISDDEIRNFFSEFGTILEVEMPF 250
+ S+ ++R+ F +FG + ++E PF
Sbjct: 120 DYSEQDLRSHFEQFGKVDDIEWPF 143
Score = 39.1 bits (87), Expect = 4e-04
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 166
D T R FAFIVF+ ES DK + + T ++ D KKA GK F G
Sbjct: 144 DKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKA-VPQGKRFPG 194
Score = 33.9 bits (74), Expect = 0.015
Identities = 9/33 (27%), Positives = 26/33 (78%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEMPF 250
KIFVGG++ E++++++ + F+++G + + ++ +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKY 62
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 65.7 bits (153), Expect = 4e-12
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGK 154
V DP T R+RGF FI F P S+DKV+ EH ++ KK+DPK K + K
Sbjct: 76 VMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKK 135
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEMPF 250
+F+GGL++ + ++++ +F +G + + + F
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMF 167
Score = 40.3 bits (90), Expect = 2e-04
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T R RGF F+ F + E DKV H IN K V+ KKA+ +
Sbjct: 168 DKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 33.1 bits (72), Expect = 0.027
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 95 EHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
E +N D GK+F+GGL+ + + + +R++F FG + E
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNE 73
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 65.7 bits (153), Expect = 4e-12
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGK 154
V DP T R+RGF FI F P S+DKV+ EH ++ KK+DPK K + K
Sbjct: 76 VMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKK 135
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEMPF 250
+F+GGL++ + ++++ +F +G + + + F
Sbjct: 136 VFIGGLSATSTLEDMKQYFETYGKVEDAMLMF 167
Score = 40.3 bits (90), Expect = 2e-04
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T R RGF F+ F + E DKV H IN K V+ KKA+ +
Sbjct: 168 DKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 33.1 bits (72), Expect = 0.027
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 95 EHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
E +N D GK+F+GGL+ + + + +R++F FG + E
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNE 73
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 59.3 bits (137), Expect = 4e-10
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK--------- 154
V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 54 VMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVST 113
Query: 155 --IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++V G+ + ++D + +F+++GT+ + E+
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 145
Score = 41.5 bits (93), Expect = 8e-05
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEV 238
KIFVGGLTS +DD +R F+S+FG I ++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDI 52
Score = 33.9 bits (74), Expect = 0.015
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 148 DKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 59.3 bits (137), Expect = 4e-10
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK--------- 154
V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 16 VMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVST 75
Query: 155 --IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++V G+ + ++D + +F+++GT+ + E+
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 107
Score = 33.9 bits (74), Expect = 0.015
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 110 DKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 59.3 bits (137), Expect = 4e-10
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK--------- 154
V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 16 VMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVST 75
Query: 155 --IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++V G+ + ++D + +F+++GT+ + E+
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 107
Score = 33.9 bits (74), Expect = 0.015
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 110 DKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 59.3 bits (137), Expect = 4e-10
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK--------- 154
V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 54 VMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVST 113
Query: 155 --IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++V G+ + ++D + +F+++GT+ + E+
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 145
Score = 41.5 bits (93), Expect = 8e-05
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEV 238
KIFVGGLTS +DD +R F+S+FG I ++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDI 52
Score = 33.9 bits (74), Expect = 0.015
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 148 DKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 59.3 bits (137), Expect = 4e-10
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK--------- 154
V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 54 VMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVST 113
Query: 155 --IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++V G+ + ++D + +F+++GT+ + E+
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 145
Score = 41.5 bits (93), Expect = 8e-05
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEV 238
KIFVGGLTS +DD +R F+S+FG I ++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDI 52
Score = 33.9 bits (74), Expect = 0.015
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 148 DKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 44.4 bits (100), Expect = 1e-05
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG------------- 151
DPNT SRGF F+ F + S + M H + K VD K+A R
Sbjct: 83 DPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETD 142
Query: 152 -----KIFVGGLTSEI-SDDEIRNFFSEFGTILEVEM 244
K+ + G+T+ + S D +R +F FGT+ +VE+
Sbjct: 143 PAPGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEI 179
Score = 35.1 bits (77), Expect = 0.007
Identities = 10/28 (35%), Positives = 24/28 (85%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL+ + +D+++ N+FS++G +++
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVD 77
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 44.4 bits (100), Expect = 1e-05
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG------------- 151
DPNT SRGF F+ F + S + M H + K VD K+A R
Sbjct: 103 DPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETD 162
Query: 152 -----KIFVGGLTSEI-SDDEIRNFFSEFGTILEVEM 244
K+ + G+T+ + S D +R +F FGT+ +VE+
Sbjct: 163 PAPGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEI 199
Score = 35.1 bits (77), Expect = 0.007
Identities = 10/28 (35%), Positives = 24/28 (85%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL+ + +D+++ N+FS++G +++
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVD 97
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 44.4 bits (100), Expect = 1e-05
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG------------- 151
DPNT SRGF F+ F + S + M H + K VD K+A R
Sbjct: 104 DPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETD 163
Query: 152 -----KIFVGGLTSEI-SDDEIRNFFSEFGTILEVEM 244
K+ + G+T+ + S D +R +F FGT+ +VE+
Sbjct: 164 PAPGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEI 200
Score = 35.1 bits (77), Expect = 0.007
Identities = 10/28 (35%), Positives = 24/28 (85%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+F+GGL+ + +D+++ N+FS++G +++
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVD 98
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 40.3 bits (90), Expect = 2e-04
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-------GKIFVGGLTSE 181
G S+GF F+ + +KV+A +H I+ ++ D K R +IFVG LT +
Sbjct: 210 GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDK 269
Query: 182 ISDDEIRNFFSE 217
+ + ++R F +
Sbjct: 270 VDEHQLRKVFGD 281
Score = 29.9 bits (64), Expect = 0.25
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 32 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 145
RGFAF+ + E+ +++++ G T+N V A+ R
Sbjct: 302 RGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPR 339
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.9 bits (79), Expect = 0.004
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH------GKIFVGG 169
D T +GF F+ F E D + + K + KA A IFVG
Sbjct: 47 DRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGN 106
Query: 170 LTSEISDDEIRNFFSEFGTILEV 238
L E+ + + + FS FG IL+V
Sbjct: 107 LDPEVDEKLLYDTFSAFGVILQV 129
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA 91
+ D ++G S+GFAFI F + E+ D + A
Sbjct: 132 IMRDVDSGTSKGFAFINFASFEASDTALEA 161
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
I+VGGL ++S+ + + G ++ V MP
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMP 45
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.9 bits (79), Expect = 0.004
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH------GKIFVGG 169
D T +GF F+ F E D + + K + KA A IFVG
Sbjct: 57 DRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGN 116
Query: 170 LTSEISDDEIRNFFSEFGTILEV 238
L E+ + + + FS FG IL+V
Sbjct: 117 LDPEVDEKLLYDTFSAFGVILQV 139
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAA 91
+ D ++G S+GFAFI F + E+ D + A
Sbjct: 142 IMRDVDSGTSKGFAFINFASFEASDTALEA 171
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
I+VGGL ++S+ + + G ++ V MP
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMP 55
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.9 bits (79), Expect = 0.004
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
K+FVGGL S + + +I NFFS +G L+V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 35.1 bits (77), Expect = 0.007
Identities = 12/30 (40%), Positives = 23/30 (76%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+FVG ++ ++S+D IR+ FS+ G +L ++M
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKM 49
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 35.1 bits (77), Expect = 0.007
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 124
DP+TG RGFA I F + + +K + H I+ +VD
Sbjct: 59 DPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRVD 96
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 34.7 bits (76), Expect = 0.009
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +2
Query: 44 FIVFKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVGGLTSEISDDEIRN 205
++ F A ES++K + +H I KV KK + + IFVG L EI++D +
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALIT 264
Query: 206 FFS 214
FFS
Sbjct: 265 FFS 267
Score = 31.5 bits (68), Expect = 0.082
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+FVG + +++ +R FS+FGTI V M
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
Score = 30.7 bits (66), Expect = 0.14
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 139
D +TG+ +GFAF+ FK S+ +A TI +K D + K
Sbjct: 281 DKDTGKGKGFAFVNFKQDSSVS--LALSMETIKMEKRDLRITK 321
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 34.3 bits (75), Expect = 0.012
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 128 KKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
K +RH +FVG L SEI ++R F +FG + E ++
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKI 163
Score = 29.5 bits (63), Expect = 0.33
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 98 HTINNKKVDP--KKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
H + K D +A A + ++VG + + + +DEIR F FG I EV
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEV 284
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 33.9 bits (74), Expect = 0.015
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 56 KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
K +++ M +++ PK K K+F+G L+ + S+DE+R F+ FG + E
Sbjct: 94 KTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGELDE 152
Query: 236 V 238
V
Sbjct: 153 V 153
Score = 28.7 bits (61), Expect = 0.58
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+FVG + + + ++R+ F +FG I E
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYE 57
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 33.9 bits (74), Expect = 0.015
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFV 163
D +T S+G F+ F ++I+ KV+ H + K D + R K+F+
Sbjct: 89 DKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFI 146
Query: 164 GGLTSEISDDEIRNFFSEFGTI 229
G L+ + +++ +R F++FG I
Sbjct: 147 GQLSKKHNEENLREIFAKFGHI 168
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 33.9 bits (74), Expect = 0.015
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFV 163
D +T S+G F+ F ++I+ KV+ H + K D + R K+F+
Sbjct: 89 DKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFI 146
Query: 164 GGLTSEISDDEIRNFFSEFGTI 229
G L+ + +++ +R F++FG I
Sbjct: 147 GQLSKKHNEENLREIFAKFGHI 168
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 33.9 bits (74), Expect = 0.015
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFV 163
D +T S+G F+ F ++I+ KV+ H + K D + R K+F+
Sbjct: 89 DKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFI 146
Query: 164 GGLTSEISDDEIRNFFSEFGTI 229
G L+ + +++ +R F++FG I
Sbjct: 147 GQLSKKHNEENLREIFAKFGHI 168
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 33.9 bits (74), Expect = 0.015
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFV 163
D +T S+G F+ F ++I+ KV+ H + K D + R K+F+
Sbjct: 89 DKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFI 146
Query: 164 GGLTSEISDDEIRNFFSEFGTI 229
G L+ + +++ +R F++FG I
Sbjct: 147 GQLSKKHNEENLREIFAKFGHI 168
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 33.9 bits (74), Expect = 0.015
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFV 163
D +T S+G F+ F ++I+ KV+ H + K D + R K+F+
Sbjct: 89 DKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFI 146
Query: 164 GGLTSEISDDEIRNFFSEFGTI 229
G L+ + +++ +R F++FG I
Sbjct: 147 GQLSKKHNEENLREIFAKFGHI 168
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 33.9 bits (74), Expect = 0.015
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFV 163
D +T S+G F+ F ++I+ KV+ H + K D + R K+F+
Sbjct: 89 DKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFI 146
Query: 164 GGLTSEISDDEIRNFFSEFGTI 229
G L+ + +++ +R F++FG I
Sbjct: 147 GQLSKKHNEENLREIFAKFGHI 168
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 33.9 bits (74), Expect = 0.015
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFV 163
D +T S+G F+ F ++I+ KV+ H + K D + R K+F+
Sbjct: 89 DKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFI 146
Query: 164 GGLTSEISDDEIRNFFSEFGTI 229
G L+ + +++ +R F++FG I
Sbjct: 147 GQLSKKHNEENLREIFAKFGHI 168
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 33.9 bits (74), Expect = 0.015
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 56 KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
K +++ M +++ PK K K+F+G L+ + S+DE+R F+ FG + E
Sbjct: 94 KTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGELDE 152
Query: 236 V 238
V
Sbjct: 153 V 153
Score = 28.7 bits (61), Expect = 0.58
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
K+FVG + + + ++R+ F +FG I E
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYE 57
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 33.5 bits (73), Expect = 0.020
Identities = 11/49 (22%), Positives = 32/49 (65%)
Frame = +2
Query: 98 HTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
H+ + ++ + ++H +FVG L+ ++S++ +++ F++FG + E ++
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKV 166
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 33.5 bits (73), Expect = 0.020
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Frame = +2
Query: 32 RGFAFIVFKAPESIDKVMAAGEHTINNKKV-----DPKK-------AKARHGKIFVGGLT 175
RGFA++V + + + + + + + DP+K K+FV +
Sbjct: 632 RGFAYVVMENDQKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVH 691
Query: 176 SEISDDEIRNFFSEFGTILEV 238
+ +DDE++ FS+FGT+ V
Sbjct: 692 FQATDDELKALFSKFGTVTSV 712
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 33.5 bits (73), Expect = 0.020
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +2
Query: 17 NTGR-SRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVGG 169
NT R S G+A++ F+ P ++ + I+ + + DP +A +G IF+
Sbjct: 92 NTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKN 151
Query: 170 LTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 152 LDRVIDNKSVYDTFSLFGNILSCKV 176
Score = 29.1 bits (62), Expect = 0.44
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++V + +++DD +R+ FS FGTI ++
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKV 374
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPE 67
V D N GRS+GF F+ F+ PE
Sbjct: 374 VMVDEN-GRSKGFGFVCFEKPE 394
Score = 25.0 bits (52), Expect = 7.1
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 14/90 (15%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPES----IDKV--MAAGEHTINNKKVDPKKAKAR------ 145
V TD + G S+G+ F+ F+ S I+KV M + + K P+ + +
Sbjct: 176 VATD-DEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESG 234
Query: 146 --HGKIFVGGLTSEISDDEIRNFFSEFGTI 229
+ +FV + +++ FS+FG I
Sbjct: 235 LKYTNVFVKNFGEHLDQEKLSAMFSKFGEI 264
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 33.5 bits (73), Expect = 0.020
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +2
Query: 17 NTGR-SRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVGG 169
NT R S G+A++ F+ P ++ + I+ + + DP +A +G IF+
Sbjct: 92 NTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKN 151
Query: 170 LTSEISDDEIRNFFSEFGTILEVEM 244
L I + + + FS FG IL ++
Sbjct: 152 LDRVIDNKSVYDTFSLFGNILSCKV 176
Score = 29.1 bits (62), Expect = 0.44
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++V + +++DD +R+ FS FGTI ++
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKV 374
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPE 67
V D N GRS+GF F+ F+ PE
Sbjct: 374 VMVDEN-GRSKGFGFVCFEKPE 394
Score = 25.0 bits (52), Expect = 7.1
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 14/90 (15%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPES----IDKV--MAAGEHTINNKKVDPKKAKAR------ 145
V TD + G S+G+ F+ F+ S I+KV M + + K P+ + +
Sbjct: 176 VATD-DEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESG 234
Query: 146 --HGKIFVGGLTSEISDDEIRNFFSEFGTI 229
+ +FV + +++ FS+FG I
Sbjct: 235 LKYTNVFVKNFGEHLDQEKLSAMFSKFGEI 264
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 33.5 bits (73), Expect = 0.020
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 146 HGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
H +F+GGL ++ +EI FSEFG +L V
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLV 348
Score = 32.7 bits (71), Expect = 0.035
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 98 HTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
HT+ + + K+FVGG++ ++ I FF +FGT+ V+ P
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWP 236
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 33.5 bits (73), Expect = 0.020
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 146 HGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
H +F+GGL ++ +EI FSEFG +L V
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLV 348
Score = 32.7 bits (71), Expect = 0.035
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 98 HTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
HT+ + + K+FVGG++ ++ I FF +FGT+ V+ P
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWP 236
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 33.5 bits (73), Expect = 0.020
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 146 HGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
H +F+GGL ++ +EI FSEFG +L V
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLV 134
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 33.5 bits (73), Expect = 0.020
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 146 HGKIFVGGLTSEISDDEIRNFFSEFGTILEV 238
H +F+GGL ++ +EI FSEFG +L V
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLV 348
Score = 32.7 bits (71), Expect = 0.035
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 98 HTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
HT+ + + K+FVGG++ ++ I FF +FGT+ V+ P
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWP 236
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 33.1 bits (72), Expect = 0.027
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
RH +FVG L+SE+ + ++R F FG + + ++
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKV 53
Score = 29.9 bits (64), Expect = 0.25
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++VG + S +++DEIR F+ FG I EV +
Sbjct: 130 VYVGNIAS-LTEDEIRQGFASFGRITEVRI 158
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 33.1 bits (72), Expect = 0.027
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
RH +FVG L+SE+ + ++R F FG + + ++
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKV 63
Score = 29.9 bits (64), Expect = 0.25
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++VG + S +++DEIR F+ FG I EV +
Sbjct: 140 VYVGNIAS-LTEDEIRQGFASFGRITEVRI 168
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 33.1 bits (72), Expect = 0.027
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
RH +FVG L+SE+ + ++R F FG + + ++
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKV 166
Score = 29.9 bits (64), Expect = 0.25
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++VG + S +++DEIR F+ FG I EV +
Sbjct: 243 VYVGNIAS-LTEDEIRQGFASFGRITEVRI 271
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 33.1 bits (72), Expect = 0.027
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 143 RHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
RH +FVG L+SE+ + ++R F FG + + ++
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKV 134
Score = 29.9 bits (64), Expect = 0.25
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++VG + S +++DEIR F+ FG I EV +
Sbjct: 211 VYVGNIAS-LTEDEIRQGFASFGRITEVRI 239
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 32.7 bits (71), Expect = 0.035
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T S G+A++ F+ P ++ M ++ K + DP ++ G IF+
Sbjct: 66 DNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIK 125
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + I + FS FG IL ++
Sbjct: 126 NLDKVIDNKSIYDTFSLFGNILSCKV 151
Score = 29.5 bits (63), Expect = 0.33
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPE 67
V TD N GRS+GF F+ F+ PE
Sbjct: 348 VMTDEN-GRSKGFGFVCFEKPE 368
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVMAA 91
G+S+GF F+ F PE + + A
Sbjct: 249 GKSKGFGFVAFANPEEAETAVQA 271
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 32.7 bits (71), Expect = 0.035
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 125 PKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
PKK ++FVG L +E+ + E++ FS G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 32.7 bits (71), Expect = 0.035
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 125 PKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
PKK ++FVG L +E+ + E++ FS G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.035
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 125 PKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILE 235
PKK ++FVG L +E+ + E++ FS G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 32.7 bits (71), Expect = 0.035
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVG 166
D T S G+A++ F+ P ++ M ++ K + DP ++ G IF+
Sbjct: 66 DNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIK 125
Query: 167 GLTSEISDDEIRNFFSEFGTILEVEM 244
L I + I + FS FG IL ++
Sbjct: 126 NLDKVIDNKSIYDTFSLFGNILSCKV 151
Score = 29.5 bits (63), Expect = 0.33
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPE 67
V TD N GRS+GF F+ F+ PE
Sbjct: 348 VMTDEN-GRSKGFGFVCFEKPE 368
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVMAA 91
G+S+GF F+ F PE + + A
Sbjct: 249 GKSKGFGFVAFANPEEAETAVQA 271
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 31.9 bits (69), Expect = 0.062
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEV 238
+I++G LTS +S+ +I +FF +G I +V
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV 32
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 31.9 bits (69), Expect = 0.062
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEV 238
+I++G LTS +S+ +I +FF +G I +V
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV 32
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 31.9 bits (69), Expect = 0.062
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEV 238
+I++G LTS +S+ +I +FF +G I +V
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV 32
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 31.9 bits (69), Expect = 0.062
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGE-HTINNKKVDPKKAKARHGKIFVGGLTSEIS 187
DP +G SRG+AF+ + E + H I+ K + ++F+G + S
Sbjct: 234 DPMSGASRGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRLFIGNIPKTKS 293
Query: 188 DDEI 199
DEI
Sbjct: 294 KDEI 297
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 31.9 bits (69), Expect = 0.062
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+FVG + S++ + EIR+ F E G + EV++
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
Score = 29.5 bits (63), Expect = 0.33
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK------IFV 163
+KT NT + +AF++F+ + + A E + + K +GK +FV
Sbjct: 200 IKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGYGKSQVSRRLFV 255
Query: 164 GGLTSEISDDEIRNFFSEFGTILEVE 241
GGL S + ++ F EFG + ++
Sbjct: 256 GGLGSWCDKEILQKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 31.9 bits (69), Expect = 0.062
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+FVG + S++ + EIR+ F E G + EV++
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
Score = 29.5 bits (63), Expect = 0.33
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK------IFV 163
+KT NT + +AF++F+ + + A E + + K +GK +FV
Sbjct: 200 IKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGYGKSQVSRRLFV 255
Query: 164 GGLTSEISDDEIRNFFSEFGTILEVE 241
GGL S + ++ F EFG + ++
Sbjct: 256 GGLGSWCDKEILQKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 31.9 bits (69), Expect = 0.062
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+FVG + S++ + EIR+ F E G + EV++
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI 177
Score = 29.5 bits (63), Expect = 0.33
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK------IFV 163
+KT NT + +AF++F+ + + A E + + K +GK +FV
Sbjct: 177 IKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGYGKSQVSRRLFV 232
Query: 164 GGLTSEISDDEIRNFFSEFGTILEVE 241
GGL S + ++ F EFG + ++
Sbjct: 233 GGLGSWCDKEILQKAFGEFGFVENID 258
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 31.9 bits (69), Expect = 0.062
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILE 235
KIFVGGL SD + +F +FG I E
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEE 63
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 31.1 bits (67), Expect = 0.11
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 80 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLTSEISDDEIRNFFSEFGTIL 232
+M + + K P A+ + K+F+GGL ++S++++ F FG +L
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 31.1 bits (67), Expect = 0.11
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEV 238
K++VGGL S+ + E+ F FG I +V
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV 32
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 31.1 bits (67), Expect = 0.11
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEV 238
K++VGGL S+ + E+ F FG I +V
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV 32
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 31.1 bits (67), Expect = 0.11
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEV 238
K++VGGL S+ + E+ F FG I +V
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV 32
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 30.7 bits (66), Expect = 0.14
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
Frame = +2
Query: 134 AKARHGKIFVGGLTSEI-------SDDEIRNFFSEFGTILEVEMP 247
A KI++GG+T EI ++ EI+ F ++G I EV MP
Sbjct: 321 ANLNERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMP 365
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 29.5 bits (63), Expect = 0.33
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+IFVGG + ++ E+R F +F + +V+M
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM 97
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 29.5 bits (63), Expect = 0.33
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPE 67
V TD N GRS+GF F+ F+ PE
Sbjct: 288 VMTDEN-GRSKGFGFVCFEKPE 308
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVMAA 91
G+S+GF F+ F PE + + A
Sbjct: 189 GKSKGFGFVAFANPEEAETAVQA 211
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 29.5 bits (63), Expect = 0.33
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPE 67
V TD N GRS+GF F+ F+ PE
Sbjct: 285 VMTDEN-GRSKGFGFVCFEKPE 305
Score = 28.3 bits (60), Expect = 0.76
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 122 DPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
DP ++ G IF+ L I + I + FS FG IL ++
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKV 88
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVMAA 91
G+S+GF F+ F PE + + A
Sbjct: 186 GKSKGFGFVAFANPEEAETAVQA 208
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 29.5 bits (63), Expect = 0.33
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
KIFVGG+ +I++ +++ F EFG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 29.5 bits (63), Expect = 0.33
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+IFVGG + ++ E+R F +F + +V+M
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM 98
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 29.1 bits (62), Expect = 0.44
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTI 229
KIF+GGL + +++D+++ FG +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPL 317
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 29.1 bits (62), Expect = 0.44
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEISD 190
D +TG+S+GFAF+ +K S ++A N + + + H + + E +D
Sbjct: 72 DKDTGKSKGFAFLCYKDQRS--TILAV--DNFNGISLHKRMIRVDHVEEYKVPKYKEDAD 127
Query: 191 DEIRNFFSE 217
DE + + E
Sbjct: 128 DETKRLWEE 136
Score = 28.3 bits (60), Expect = 0.76
Identities = 8/30 (26%), Positives = 21/30 (70%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
I++GGL+ +S+ ++ FS++G ++ + +
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINL 69
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 29.1 bits (62), Expect = 0.44
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTI 229
KIF+GGL + +++D+++ FG +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPL 317
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 29.1 bits (62), Expect = 0.44
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTI 229
KIF+GGL + +++D+++ FG +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPL 292
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 29.1 bits (62), Expect = 0.44
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTI 229
KIF+GGL + +++D+++ FG +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPL 295
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 28.3 bits (60), Expect = 0.76
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+++VGG ++ +S ++IRN ++ EV +
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSI 40
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 1.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 29 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 148
SRGF IVF A ++++V G H +N+ K K K H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 27.5 bits (58), Expect = 1.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 6 RQIQTQADHEGLPSLCLR 59
+ I+T D EG+PS CLR
Sbjct: 74 KMIRTDRDEEGIPSTCLR 91
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 27.1 bits (57), Expect = 1.8
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++++G L + SD ++ +FF +G + +V M
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM 33
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 27.1 bits (57), Expect = 1.8
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+FV + E ++D++ + FSE+G I + +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHL 86
>CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical
protein C52D10.12 protein.
Length = 811
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -1
Query: 147 CRALAFFGSTFLLLMVCSPAAMTLSIDSGALNTMKANPRDLPV 19
C + F G T L LM +P + L I SGA+ K + LPV
Sbjct: 213 CLSALFSGLT-LGLMSLTPQELELVIKSGAIKEQKCAAKILPV 254
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++VG + +++E+ NFFS G I V +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRI 36
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPESIDKVM 85
D TGR RGFAFI F S + +
Sbjct: 39 DRETGRPRGFAFIEFAEEGSAQRAV 63
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 26.6 bits (56), Expect = 2.3
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 2 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 121
+ D TG + FAF+ F+ ES+ + N+K+
Sbjct: 77 IPKDKFTGYQKNFAFVEFQKLESVQLALVLSGTMFRNRKI 116
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 26.2 bits (55), Expect = 3.1
Identities = 8/30 (26%), Positives = 19/30 (63%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
++VG + ++D++ N+FS+ G + V +
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRI 35
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVF 55
D TGR RGFAF+ F
Sbjct: 38 DRETGRPRGFAFVEF 52
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 92 GEHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTI 229
G+HT + + K +FVG ++ + SD+ IR +E G +
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNV 73
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 92 GEHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEIRNFFSEFGTI 229
G+HT + + K +FVG ++ + SD+ IR +E G +
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNV 73
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 155 IFVGGLTSEISDDEIRNFFSEFGTILEVEM 244
+FV L+S+ D + FS+FG I+ V++
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKI 405
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPES 70
DP TG + FAF+ ++ PE+
Sbjct: 136 DPATGHHKTFAFVEYEVPEA 155
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPES 70
DP TG + FAF+ ++ PE+
Sbjct: 136 DPATGHHKTFAFVEYEVPEA 155
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVFKAPES 70
DP TG + FAF+ ++ PE+
Sbjct: 136 DPATGHHKTFAFVEYEVPEA 155
>Z81124-6|CAB03375.1| 335|Caenorhabditis elegans Hypothetical
protein T21B4.8 protein.
Length = 335
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 240 STSKIVPNSLKKFLISSSEISLVSPPTKIFPCRALAFFG 124
S + + N + F++S S + P FP +AL+F G
Sbjct: 55 SVKQSLTNLIFWFIVSQIIFSFIEVPYVYFPYKALSFIG 93
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 113 KKVDPKKAKARHGKIFVGGLTSEISDDEIRN 205
K + KKA A G+I VG ++I+ + +RN
Sbjct: 1029 KSICGKKAVALDGRIQVGDFITKINTESLRN 1059
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 113 KKVDPKKAKARHGKIFVGGLTSEISDDEIRN 205
K + KKA A G+I VG ++I+ + +RN
Sbjct: 1051 KSICGKKAVALDGRIQVGDFITKINTESLRN 1081
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical
protein C52A11.4e protein.
Length = 2184
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 113 KKVDPKKAKARHGKIFVGGLTSEISDDEIRN 205
K + KKA A G+I VG ++I+ + +RN
Sbjct: 842 KSICGKKAVALDGRIQVGDFITKINTESLRN 872
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 113 KKVDPKKAKARHGKIFVGGLTSEISDDEIRN 205
K + KKA A G+I VG ++I+ + +RN
Sbjct: 1149 KSICGKKAVALDGRIQVGDFITKINTESLRN 1179
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 113 KKVDPKKAKARHGKIFVGGLTSEISDDEIRN 205
K + KKA A G+I VG ++I+ + +RN
Sbjct: 1029 KSICGKKAVALDGRIQVGDFITKINTESLRN 1059
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 113 KKVDPKKAKARHGKIFVGGLTSEISDDEIRN 205
K + KKA A G+I VG ++I+ + +RN
Sbjct: 1051 KSICGKKAVALDGRIQVGDFITKINTESLRN 1081
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical
protein C52A11.4e protein.
Length = 2184
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 113 KKVDPKKAKARHGKIFVGGLTSEISDDEIRN 205
K + KKA A G+I VG ++I+ + +RN
Sbjct: 842 KSICGKKAVALDGRIQVGDFITKINTESLRN 872
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 113 KKVDPKKAKARHGKIFVGGLTSEISDDEIRN 205
K + KKA A G+I VG ++I+ + +RN
Sbjct: 1149 KSICGKKAVALDGRIQVGDFITKINTESLRN 1179
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical
protein C52A11.4c protein.
Length = 2202
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 113 KKVDPKKAKARHGKIFVGGLTSEISDDEIRN 205
K + KKA A G+I VG ++I+ + +RN
Sbjct: 860 KSICGKKAVALDGRIQVGDFITKINTESLRN 890
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 17 NTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 154
N S+GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 16 NERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 63
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 17 NTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 154
N S+GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 134 NERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical
protein F08D12.1 protein.
Length = 694
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 116 KVDPKKAKARHGKIFVGGLTSEISDDEIRN 205
K DPKKA++ K+F + +++ DE+ +
Sbjct: 534 KTDPKKAESLSAKLFPETMEVDVNVDELED 563
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 113 KKVDPKKAKARHGKIFVGGLTSEISDDEIRN 205
K + KKA A G+I VG ++I+ + +RN
Sbjct: 820 KSICGKKAVALDGRIQVGDFITKINTESLRN 850
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 17 NTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 154
N S+GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 134 NERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 8 TDPNTGRSRGFAFIVFKAPESI 73
TD TGRS+G ++ F ES+
Sbjct: 58 TDSRTGRSKGICYVEFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 8 TDPNTGRSRGFAFIVFKAPESI 73
TD TGRS+G ++ F ES+
Sbjct: 203 TDSRTGRSKGICYVEFWDEESV 224
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 23 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 118
G+ RGFAF+ F S +A T N K
Sbjct: 40 GKFRGFAFVGFLDEGSASNALAKSNQTFFNSK 71
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 11 DPNTGRSRGFAFIVF 55
D TGR RGFAF+ F
Sbjct: 40 DRETGRPRGFAFVEF 54
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 137 KARHGKIFVGGLTSEISDDEIRNFFSEFGTI 229
++RH + + GL S + DD ++ F++FG I
Sbjct: 12 ESRH--VAISGLPSTLPDDRLQLHFTKFGEI 40
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 137 KARHGKIFVGGLTSEISDDEIRNFFSEFGTI 229
++RH + + GL S + DD ++ F++FG I
Sbjct: 12 ESRH--VAISGLPSTLPDDRLQLHFTKFGEI 40
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 137 KARHGKIFVGGLTSEISDDEIRNFFSEFGTI 229
++RH + + GL S + DD ++ F++FG I
Sbjct: 12 ESRH--VAISGLPSTLPDDRLQLHFTKFGEI 40
>Z68161-10|CAN86582.1| 705|Caenorhabditis elegans Hypothetical
protein F20C5.1d protein.
Length = 705
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 65 ESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEI 199
ES+D V EHT++N K + + K + + DDE+
Sbjct: 101 ESLDNVTERSEHTLDNHKSTEPMEEDVNNKSNIDVAINSDEDDEL 145
>Z68161-5|CAA92299.2| 764|Caenorhabditis elegans Hypothetical
protein F20C5.1b protein.
Length = 764
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 65 ESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEI 199
ES+D V EHT++N K + + K + + DDE+
Sbjct: 101 ESLDNVTERSEHTLDNHKSTEPMEEDVNNKSNIDVAINSDEDDEL 145
>Z68161-4|CAD89735.1| 781|Caenorhabditis elegans Hypothetical
protein F20C5.1a protein.
Length = 781
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 65 ESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEI 199
ES+D V EHT++N K + + K + + DDE+
Sbjct: 101 ESLDNVTERSEHTLDNHKSTEPMEEDVNNKSNIDVAINSDEDDEL 145
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 137 KARHGKIFVGGLTSEISDDEIRNFFSEFGTI 229
++RH + + GL S + DD ++ F++FG I
Sbjct: 12 ESRH--VAISGLPSTLPDDRLQLHFTKFGEI 40
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 137 KARHGKIFVGGLTSEISDDEIRNFFSEFGTI 229
++RH + + GL S + DD ++ F++FG I
Sbjct: 12 ESRH--VAISGLPSTLPDDRLQLHFTKFGEI 40
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 137 KARHGKIFVGGLTSEISDDEIRNFFSEFGTI 229
++RH + + GL S + DD ++ F++FG I
Sbjct: 12 ESRH--VAISGLPSTLPDDRLQLHFTKFGEI 40
>U50301-13|AAB37054.2| 549|Caenorhabditis elegans Hypothetical
protein F20D6.11 protein.
Length = 549
Score = 25.4 bits (53), Expect = 5.4
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = -1
Query: 225 VPNSLKKFLISSSEISLVSPPTKIFPCRALAFFGSTFLLLMVCSPAAMTLSIDSGALNTM 46
VP S K + ++ + + + P + + GS+F+ + V S L+ + ++ +
Sbjct: 256 VPGSDLKNICYLRKVEEANIISNLHPGKHVVCVGSSFIGMEVAS----ALAEKAASVTVI 311
Query: 45 KANPRDLPVFGS 10
P LPVFGS
Sbjct: 312 SNTPEPLPVFGS 323
>AY185494-1|AAO26317.1| 764|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-3 short form protein.
Length = 764
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 65 ESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEI 199
ES+D V EHT++N K + + K + + DDE+
Sbjct: 101 ESLDNVTERSEHTLDNHKSTEPMEEDVNNKSNIDVAINSDEDDEL 145
>AY185493-1|AAO26316.1| 781|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-3 long form protein.
Length = 781
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 65 ESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLTSEISDDEI 199
ES+D V EHT++N K + + K + + DDE+
Sbjct: 101 ESLDNVTERSEHTLDNHKSTEPMEEDVNNKSNIDVAINSDEDDEL 145
>AF016425-12|AAB65336.1| 190|Caenorhabditis elegans Histone h1 like
protein 6 protein.
Length = 190
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 56 KAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 154
K+P+ I K A +KKV PKKA A+ K
Sbjct: 151 KSPKKIAKPAAKKATKSPSKKVAPKKAAAKPAK 183
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Frame = -1
Query: 240 STSKIVPNSLKKFLIS----SSEISLVSPPT 160
S SK+VPN +K LI+ S I V+PPT
Sbjct: 354 SPSKVVPNPPQKSLITPTVPPSMIQTVNPPT 384
>U80842-8|AAB37951.1| 244|Caenorhabditis elegans Hypothetical
protein ZC239.12 protein.
Length = 244
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 152 KIFVGGLTSEISDDEIRNFFSEFGTILEVEMP 247
++ +GG E S + F F T+LE E+P
Sbjct: 9 RLNIGGTIFETSKSTLTKFDGFFKTLLETEIP 40
>U41019-3|AAA82329.3| 531|Caenorhabditis elegans Sop-2 related
(ectopic expressionof hox genes) protein 3 protein.
Length = 531
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 216 SLKKFLISSSEISLVSPPTKIFPCRAL 136
SLK +++S + + +V IFPC+ L
Sbjct: 66 SLKMWMLSKNLVVIVKRKDDIFPCKIL 92
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 17 NTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKARHGKI 157
N S+GF F+ + ES +K AA E + + ++ ++A K+
Sbjct: 85 NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPTRRKL 132
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 17 NTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKARHGKI 157
N S+GF F+ + ES +K AA E + + ++ ++A K+
Sbjct: 85 NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPTRRKL 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,652,481
Number of Sequences: 27780
Number of extensions: 100575
Number of successful extensions: 486
Number of sequences better than 10.0: 121
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 219801160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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