Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6j16
         (579 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   3.8  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   3.8  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   3.8  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   3.8  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   5.0  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    21   6.7  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    21   6.7  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    21   6.7  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    21   6.7  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   8.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   8.8  

>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 431 RTQSYTSSSLPDLPIPANVPVISNN 505
           + Q Y  + +  +PIP  VP+   N
Sbjct: 109 KLQYYNINYIEQIPIPVPVPIYCGN 133


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 431 RTQSYTSSSLPDLPIPANVPVISNN 505
           + Q Y  + +  +PIP  VP+   N
Sbjct: 109 KLQYYNINYIEQIPIPVPVPIYCGN 133


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 431 RTQSYTSSSLPDLPIPANVPVISNN 505
           + Q Y  + +  +PIP  VP+   N
Sbjct: 109 KLQYYNINYIEQIPIPVPVPIYCGN 133


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 431 RTQSYTSSSLPDLPIPANVPVISNN 505
           + Q Y  + +  +PIP  VP+   N
Sbjct: 109 KLQYYNINYIEQIPIPVPVPIYCGN 133


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 189 RILKYYQNH*HLHSNTIYLSRQQF 118
           R L  YQ+H HLH + +   +  +
Sbjct: 65  RDLPIYQSHHHLHHHQVLYQQSPY 88


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/25 (24%), Positives = 13/25 (52%)
 Frame = +2

Query: 431 RTQSYTSSSLPDLPIPANVPVISNN 505
           + Q Y  + +  +P+P  +P+   N
Sbjct: 320 KLQYYNINYIEQIPVPVPIPIYCGN 344


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/25 (24%), Positives = 13/25 (52%)
 Frame = +2

Query: 431 RTQSYTSSSLPDLPIPANVPVISNN 505
           + Q Y  + +  +P+P  +P+   N
Sbjct: 331 KLQYYNINYIEQIPVPVPIPIYCGN 355


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/25 (24%), Positives = 13/25 (52%)
 Frame = +2

Query: 431 RTQSYTSSSLPDLPIPANVPVISNN 505
           + Q Y  + +  +P+P  +P+   N
Sbjct: 331 KLQYYNINYIEQIPVPVPIPIYCGN 355


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/25 (24%), Positives = 13/25 (52%)
 Frame = +2

Query: 431 RTQSYTSSSLPDLPIPANVPVISNN 505
           + Q Y  + +  +P+P  +P+   N
Sbjct: 320 KLQYYNINYIEQIPVPVPIPIYCGN 344


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 576 DGPSSPPLM 550
           DGP SPPL+
Sbjct: 156 DGPDSPPLV 164


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 311 LLSLTVGFEQILDSHLN 261
           L+ L VGF +I   HLN
Sbjct: 307 LVQLGVGFMRIFGHHLN 323


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,281
Number of Sequences: 438
Number of extensions: 3186
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)