BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6j14
(639 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146723-1|AAO12083.1| 155|Anopheles gambiae odorant-binding pr... 25 1.5
AY146721-1|AAO12081.1| 144|Anopheles gambiae odorant-binding pr... 25 1.5
AF437884-1|AAL84179.1| 144|Anopheles gambiae odorant binding pr... 25 1.5
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 24 4.7
AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced ... 23 6.2
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 23 8.2
AF533894-1|AAM97679.1| 156|Anopheles gambiae ascorbate transpor... 23 8.2
AF533893-1|AAM97678.1| 570|Anopheles gambiae ascorbate transpor... 23 8.2
>AY146723-1|AAO12083.1| 155|Anopheles gambiae odorant-binding
protein AgamOBP17 protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 500 IDTNEEIHLDDVV*QFQSSFHSCYKHHGER 411
+D N ++HL+ + SS H H G+R
Sbjct: 84 VDDNGDVHLEKLHDSLPSSMHDIAMHMGKR 113
>AY146721-1|AAO12081.1| 144|Anopheles gambiae odorant-binding
protein AgamOBP1 protein.
Length = 144
Score = 25.4 bits (53), Expect = 1.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 500 IDTNEEIHLDDVV*QFQSSFHSCYKHHGER 411
+D N ++HL+ + SS H H G+R
Sbjct: 84 VDDNGDVHLEKLHDSLPSSMHDIAMHMGKR 113
>AF437884-1|AAL84179.1| 144|Anopheles gambiae odorant binding
protein protein.
Length = 144
Score = 25.4 bits (53), Expect = 1.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 500 IDTNEEIHLDDVV*QFQSSFHSCYKHHGER 411
+D N ++HL+ + SS H H G+R
Sbjct: 84 VDDNGDVHLEKLHDSLPSSMHDIAMHMGKR 113
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 23.8 bits (49), Expect = 4.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 226 LNPRPTSLFNPEDNWKIFTATHARTCRNTAQ 318
L P+ SL NP NW++ R+C ++ Q
Sbjct: 927 LEPK-VSLENPSVNWRLLWRNIHRSCLSSLQ 956
>AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced
homeotic protein protein.
Length = 372
Score = 23.4 bits (48), Expect = 6.2
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = +2
Query: 443 MTTETVIPHHQDVFPRSYQYDL 508
M + ++P+H + YQ+D+
Sbjct: 341 MASMNIVPYHMSPYGHPYQFDI 362
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 23.0 bits (47), Expect = 8.2
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = +1
Query: 448 D*NCYTTSSRCISSFVSIRPGLYKISSRSCLRW 546
D +C T++ R ++ + + P + + ++ LRW
Sbjct: 750 DGSCKTSNGRSLNDILKVGPTIQQDTTDILLRW 782
>AF533894-1|AAM97679.1| 156|Anopheles gambiae ascorbate transporter
protein.
Length = 156
Score = 23.0 bits (47), Expect = 8.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 273 FPIVLWVKQGGRPGVKLSSVNTVDETLS 190
FP+VL + PG + TVD TLS
Sbjct: 41 FPLVLCLWLQEHPGAIQTGNQTVDSTLS 68
>AF533893-1|AAM97678.1| 570|Anopheles gambiae ascorbate transporter
protein.
Length = 570
Score = 23.0 bits (47), Expect = 8.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 273 FPIVLWVKQGGRPGVKLSSVNTVDETLS 190
FP+VL + PG + TVD TLS
Sbjct: 455 FPLVLCLWLQEHPGAIQTGNQTVDSTLS 482
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,796
Number of Sequences: 2352
Number of extensions: 15321
Number of successful extensions: 82
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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