Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6j13
(660 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 69 5e-13
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 67 2e-12
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 65 1e-11
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 62 9e-11
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 58 1e-09
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 58 1e-09
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 57 2e-09
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 56 3e-09
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 55 8e-09
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 54 2e-08
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 53 3e-08
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 51 2e-07
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 48 9e-07
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 48 2e-06
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 47 2e-06
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 46 6e-06
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 45 1e-05
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 38 0.001
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 36 0.004
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 36 0.005
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 33 0.036
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 32 0.064
SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 29 0.78
SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3 s... 28 1.0
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 28 1.0
SPBC146.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.4
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ... 27 2.4
SPCC736.10c |mrps8||mitochondrial ribosomal protein subunit S8|S... 27 2.4
SPBC29A10.09c |||CAF1 family ribonuclease|Schizosaccharomyces po... 27 3.2
SPAC343.09 |ubx3|mug39|UBX domain protein Ubx3|Schizosaccharomyc... 26 4.2
SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr... 26 5.5
SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar... 25 7.3
SPAC1F7.10 |||hydantoin racemase family |Schizosaccharomyces pom... 25 7.3
SPCC126.15c |sec65||signal recognition particle subunit Sec65 |S... 25 9.7
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 25 9.7
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 25 9.7
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 25 9.7
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 9.7
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 69.3 bits (162), Expect = 5e-13
Identities = 31/69 (44%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +2
Query: 89 DYYGILGVKRSCNQYEIKRAYRRLALKYNPE-NYNNDENMKRIFALIGEAYEVLVDHKLR 265
+YY +LG+ +IK+AYR+LA+KY+P+ N ++ + F I EAY+VL D KLR
Sbjct: 8 EYYDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEKLR 67
Query: 266 AVYDQYGEE 292
+ YDQ+G+E
Sbjct: 68 SQYDQFGKE 76
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 67.3 bits (157), Expect = 2e-12
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +2
Query: 95 YGILGVKRSCNQYEIKRAYRRLALKYNPENYNNDENMKRIFALIGEAYEVLVDHKLRAVY 274
Y +L V + +Q E+K+AYR+LALKY+P+ N + F I AYE+L D + RA Y
Sbjct: 8 YEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGDK---FKEISRAYEILADEEKRATY 64
Query: 275 DQYGEEGLKRG 307
D++GEEGL+ G
Sbjct: 65 DRFGEEGLQGG 75
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 64.9 bits (151), Expect = 1e-11
Identities = 32/77 (41%), Positives = 48/77 (62%)
Frame = +2
Query: 86 FDYYGILGVKRSCNQYEIKRAYRRLALKYNPENYNNDENMKRIFALIGEAYEVLVDHKLR 265
F ILGV + ++ EI++AYR+L +++P+ +E + F I +A+EVL D + R
Sbjct: 6 FSQKQILGVSKDASESEIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQR 65
Query: 266 AVYDQYGEEGLKRGVPG 316
+YD YGEEGL G PG
Sbjct: 66 KIYDAYGEEGL-NGQPG 81
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 61.7 bits (143), Expect = 9e-11
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +2
Query: 89 DYYGILGVKRSCNQYEIKRAYRRLALKYNPE-NYNNDENMKRIFALIGEAYEVLVDHKLR 265
DYY IL + + IK++YRRLA+ Y+P+ N N E + F + EAY+VL D KLR
Sbjct: 9 DYYDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVLSDPKLR 68
Query: 266 AVYDQYGEEG 295
YD+ G+ G
Sbjct: 69 EKYDKLGKVG 78
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 58.0 bits (134), Expect = 1e-09
Identities = 26/65 (40%), Positives = 44/65 (67%)
Frame = +2
Query: 92 YYGILGVKRSCNQYEIKRAYRRLALKYNPENYNNDENMKRIFALIGEAYEVLVDHKLRAV 271
YY IL +K++C EIK++Y++LAL+ +P+ N+ + F ++ +A++VL D LRA
Sbjct: 114 YYEILDLKKTCTDTEIKKSYKKLALQLHPDK-NHAPSADEAFKMVSKAFQVLSDPNLRAH 172
Query: 272 YDQYG 286
YD+ G
Sbjct: 173 YDRTG 177
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 57.6 bits (133), Expect = 1e-09
Identities = 45/131 (34%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Frame = +2
Query: 95 YGILGVKRSCNQYEIKRAYRRLALKYNPENYNNDENMKRIFALIGEAYEVLVDHKLRAVY 274
Y L V+ ++ E+K+AYR+LALKY+P+ N E + F I AYEVL D + R +Y
Sbjct: 8 YDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGE---KKFKEISLAYEVLSDPQRRKLY 64
Query: 275 DQYG-EEGLKRGVPGPTEYIQPYAYHGEP------LRTFHEFFGTTNPYADLLDYYENPP 433
DQYG EG P E + G P RTFH F P +P
Sbjct: 65 DQYGITEGNAAPPPPGAEGGPGAGFGGFPGAGPGGARTFH--FNMGGPGGAQFFSASDPN 122
Query: 434 PMFDSPLGKGY 466
+F+ G +
Sbjct: 123 DIFERVFGHAF 133
Score = 49.2 bits (112), Expect = 5e-07
Identities = 24/62 (38%), Positives = 40/62 (64%)
Frame = +2
Query: 473 KDEAIVRPLALSLEEIYRGCLKKMKVQRLVFTDETCSELKLREKVLSIPIMPGTYPCTEI 652
++E I RPL +SLE+++ GC KKMK+ R + D + +K +++L I + PG T+I
Sbjct: 203 QNEVITRPLNVSLEDLFTGCTKKMKISRHII-DASGQSVK-ADRILEIKVKPGWKAGTKI 260
Query: 653 RF 658
+F
Sbjct: 261 KF 262
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 57.2 bits (132), Expect = 2e-09
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +2
Query: 89 DYYGILGVKRSCNQYEIKRAYRRLALKYNPENYNNDENMKRIFALIGEAYEVLVDHKLRA 268
DYY +LG+ EI RA+R+ +LKY+P+ ND F ++ AY L+D +LR
Sbjct: 9 DYYELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRK 68
Query: 269 VYD 277
YD
Sbjct: 69 AYD 71
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 56.4 bits (130), Expect = 3e-09
Identities = 31/73 (42%), Positives = 42/73 (57%)
Frame = +2
Query: 89 DYYGILGVKRSCNQYEIKRAYRRLALKYNPENYNNDENMKRIFALIGEAYEVLVDHKLRA 268
D Y LGV +S + EIK AY +LA +Y+P+ N D+ + F I +AYEVL D K +
Sbjct: 86 DPYKTLGVSKSASASEIKSAYYKLAKQYHPD-ANPDKAAQDKFVEIKQAYEVLQDPKKKK 144
Query: 269 VYDQYGEEGLKRG 307
+D YG K G
Sbjct: 145 AFDTYGAGAFKNG 157
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 55.2 bits (127), Expect = 8e-09
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +2
Query: 89 DYYGILGVKRSCNQYEIKRAYRRLALKYNPENYNNDENMKRIFALIGEAYEVLVDHKLRA 268
D+Y ILGV + EIK+AYR+LAL Y+P+ + + F +GEAY +L D + R
Sbjct: 349 DHYKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTILSDPESRR 408
Query: 269 VYD 277
+D
Sbjct: 409 RFD 411
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 54.0 bits (124), Expect = 2e-08
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +2
Query: 89 DYYGILGVKRSCNQYEIKRAYRRLALKYNPE-NYNNDENMKRIFALIGEAYEVLVDHKLR 265
DYY ILG + + + EI++ Y +L L+Y+P+ N + + F LI +A+EVL D KLR
Sbjct: 12 DYYTILGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLR 71
Query: 266 AVYDQ 280
++DQ
Sbjct: 72 ELFDQ 76
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 53.2 bits (122), Expect = 3e-08
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +2
Query: 86 FDYYGILGVKRSCNQYEIKRAYRRLALKYNPENYNNDENM--KRIFALIGEAYEVLVDHK 259
++ Y LG+ + +IK +Y RL+ ++P+ + D+ + F +I AYEVL D
Sbjct: 7 WELYLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPS 66
Query: 260 LRAVYDQYGEEGLK 301
+ +YD +GE+GLK
Sbjct: 67 KKEIYDNFGEQGLK 80
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 50.8 bits (116), Expect = 2e-07
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +2
Query: 74 IIMGFDYYGILGVKRSCNQYEIKRAYRRLALKYNPENYNNDENM--KRI-FALIGEAYEV 244
I M D Y +LGV++ + I+RAYR+ AL+++P+ +++E RI F + AY V
Sbjct: 26 IKMDIDPYSVLGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGV 85
Query: 245 LVDHKLRAVYDQYGE 289
L D K R YD+ G+
Sbjct: 86 LSDKKRRKHYDKTGQ 100
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 48.4 bits (110), Expect = 9e-07
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 89 DYYGILGVKRSCNQYEIKRAYRRLALKYNPENYNNDENMKRI--FALIGEAYEVLVDHKL 262
DYY IL + + EIK AY++ AL+ +P+ + + F L+ EAY VL D+
Sbjct: 4 DYYAILNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSR 63
Query: 263 RAVYDQ 280
RA YD+
Sbjct: 64 RAQYDR 69
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 47.6 bits (108), Expect = 2e-06
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +2
Query: 95 YGILGVKRSCNQYEIKRAYRRLALKYNPEN--YNNDENMKRIFALIGEAYEVLVDHKLRA 268
Y IL V + EIK++Y+RLAL ++P+ + E F + EAY++L D + R
Sbjct: 8 YDILEVHFEASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILKDPESRE 67
Query: 269 VYDQYG 286
+YD YG
Sbjct: 68 MYDMYG 73
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 47.2 bits (107), Expect = 2e-06
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +2
Query: 89 DYYGILGVKRSCNQYEIKRAYRRLALKYNPE-NYNNDENMKRIFALIGEAYEVLVDHKLR 265
DYY IL ++++ +I++ Y LAL+Y+P+ N ++E + F + A+EVL D R
Sbjct: 12 DYYAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKR 71
Query: 266 AVYDQ 280
+YDQ
Sbjct: 72 LIYDQ 76
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 45.6 bits (103), Expect = 6e-06
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +2
Query: 86 FDYYGILGVKRSCNQYEIKRAYRRLALKYNPENYNN-----DENMKRIFALIGEAYEVLV 250
+D Y ILG+ + + +++R Y+RL++K++P+ N E +++ + I AY L
Sbjct: 97 WDPYEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALT 156
Query: 251 DHKLRAVYDQYG 286
D K R Y YG
Sbjct: 157 DDKTRENYALYG 168
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 44.8 bits (101), Expect = 1e-05
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = +2
Query: 71 NIIMGFDYYGILGVKRSCNQYEIKRAYRRLALKYNPENYNNDENMKRIFALIGEAYEVLV 250
N D Y IL V + EIK YR+LAL+Y+P+ E+ IF+ I AY +L
Sbjct: 3 NPFKDMDCYEILQVNHDSDLQEIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILS 62
Query: 251 DHKLRAVYDQ 280
+ R +++
Sbjct: 63 NDDKRKWHEK 72
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +2
Query: 92 YYGILGVKRSCNQYEIKRAYRRLALKYNPENYNNDENMKRIFALIGEAYEVLVDHKLRAV 271
+Y +L V + EI RAYR+ ++ Y+P+ + K ++ L+G +L + + R
Sbjct: 41 FYELLEVPTKASIKEINRAYRKKSILYHPD---KNPKSKELYTLLGLIVNILRNTETRKR 97
Query: 272 YDQYGEEGLKR 304
YD + + G R
Sbjct: 98 YDYFLKNGFPR 108
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 36.3 bits (80), Expect = 0.004
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 89 DYYGILGVK--RSCNQYEIKRAYRRLALKYNPENYNNDENMKRIFALIGEAYEVLVDHKL 262
++Y +L +K ++ EIK AYR+ L ++P+ ++ + EAY+VL K
Sbjct: 2 NHYSVLNLKDGKTYTDDEIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKD 61
Query: 263 RAVYDQYGEE 292
R Y EE
Sbjct: 62 RQQYQIKQEE 71
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 35.9 bits (79), Expect = 0.005
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = +2
Query: 89 DYYGILGVKR---SCNQYEIKRAYRRLALKYNPENYNNDENMK--RIFALIGEAYEVLVD 253
D+Y +LG+ + + +IK+A+ + LK++P+ N+ F I +AYE+L D
Sbjct: 97 DHYAVLGLSKYRYKADTEQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEILSD 156
Query: 254 HKLRAVYDQYGE 289
R +D E
Sbjct: 157 PVRRRQFDSVDE 168
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 33.1 bits (72), Expect = 0.036
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Frame = +2
Query: 95 YGILGVKRSCNQYEIKRAYRRLALKYNPENYNN-------------DENMKRIFALIGEA 235
Y IL + R+C +IKR Y L K++P+ N +++ + F L+ A
Sbjct: 34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQLAPTESPPEINKHNEEYFRLLLAA 93
Query: 236 YEVLVDHKLRAVYDQYG 286
+L D + R YD++G
Sbjct: 94 NALLSDKRRREEYDRFG 110
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 32.3 bits (70), Expect = 0.064
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Frame = +2
Query: 8 AICNKDVNFKFTFLHVYKNTTNIIMGFDYYGILGV-----KRSCNQYEIKRAYRRLALKY 172
++C+K V F F ++ + I + YG++GV KRS +Y I R++
Sbjct: 1332 SVCSKYVQFGNVFNLLHAGASYIRIHQKGYGVVGVSSKYGKRSWARYPIFWGLRKIGKLP 1391
Query: 173 NPENYNNDENMKRIFA-LIGEAYEVLVDHKLRA 268
NP+ +N N K + A + E + HK A
Sbjct: 1392 NPDPADNGTNFKDLDANSMNEFENIKAKHKRSA 1424
>SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 843
Score = 28.7 bits (61), Expect = 0.78
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 200 SRRCCSFPDCI*ARGGGRPVLFRTDCTNVSLPVFRSNQIPLLYLL 66
S+ +F + A GG+ +LFR+ +VS F+ N PL +L
Sbjct: 207 SKNVTAFVNLEGAGSGGKAMLFRSSNGHVSSAYFKGNHYPLASIL 251
>SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3
subunit Alp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 821
Score = 28.3 bits (60), Expect = 1.0
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 191 NDENMKRIFALIGEAYEVLVDHKLRAVYDQYGEEGLKRGVPGPT-EYIQPYAYHGEPLRT 367
N EN KR+ ++ + Y V D ++ + D+ E + GP E I+ + Y GE +
Sbjct: 338 NQENKKRLIQVVSK-YNVHGDPLIQELSDKILTE-----ITGPLYEMIENWIYKGELVDP 391
Query: 368 FHEFF 382
+ EFF
Sbjct: 392 YQEFF 396
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +2
Query: 95 YGILGVKRSCNQYEIKRAYRRLALKYNPENYNNDENMKRIFALIGEAYEVLVDHKLRAVY 274
Y +L + + +I+ YR+ +L +P+ ++ F ++ +A LV+ K+R
Sbjct: 33 YDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAADAFDILKKAESDLVNDKIRESL 92
Query: 275 D 277
D
Sbjct: 93 D 93
>SPBC146.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 263
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 369 NVLNGSPWYAYGWIYSVGPGTPLLRPSSP 283
N+ SPW S+G +PLL P SP
Sbjct: 72 NISQHSPWLLEAASNSIGDSSPLLSPISP 100
>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 307
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 185 YNNDENMKRIFALIGEAYEVLVDHKLRAVY 274
YNN +++ R L E Y++L + KL V+
Sbjct: 226 YNNMKHILRAHQLCSEGYQILFEKKLSTVW 255
>SPCC736.10c |mrps8||mitochondrial ribosomal protein subunit
S8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 152
Score = 27.1 bits (57), Expect = 2.4
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +1
Query: 262 QGCLRPVRRGRSQERRAGPDGVYPTVRVPRR-AVEDISRVLRY--NKPLRRFARLLRKPS 432
QG L ++RG GPD + PT+ + A + L+Y KP+ + R + KPS
Sbjct: 39 QGFLSSIQRGDIH----GPDAL-PTITTRQNVATRRLWLGLKYFEGKPVLHYIRAVSKPS 93
Query: 433 TDVRFASGQRIQ-RKGR 480
V + +Q KGR
Sbjct: 94 RKVNLTPSELLQFAKGR 110
>SPBC29A10.09c |||CAF1 family ribonuclease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 562 IHGRNLLGIETARESFVHTDNAGHVSV 642
IHG+N L ET +E H D+A +VS+
Sbjct: 3 IHGKNFL--ETLKELEKHVDSAHYVSI 27
>SPAC343.09 |ubx3|mug39|UBX domain protein Ubx3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 410
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 314 GPTEYIQPYAYHGEPLRTFHEFFGTTNPYADLLDYYENPP 433
GP+ +A G+ L T +E G+T P ENPP
Sbjct: 164 GPSSLASSWASVGQRLGTENEASGSTTPVTQSGPPRENPP 203
>SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 553
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 392 NPYADLLDYYENPPPMFDSPLGKGYKEKDEAIVRPLALSLEE 517
N + L E P ++DS L + D+A P A+S+E+
Sbjct: 355 NEFIHELRENEGPSVLYDSGLDQNGTNYDDAFAAPEAISIEK 396
>SPAC6C3.06c |||P-type ATPase, calcium
transporting|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1033
Score = 25.4 bits (53), Expect = 7.3
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +2
Query: 284 GEEGLKRGVPGPTEYIQPYAYHGEPLRTFHEFFGT 388
GE K +P ++ + + P+++ H F+GT
Sbjct: 225 GETDWKLRIPCSNQHTEGIVHADAPIKSVHHFYGT 259
>SPAC1F7.10 |||hydantoin racemase family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 238
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 401 ADLLDYYENPPPMFDSPLGKGYKEKDEAIVRPLALSLEEIYR 526
A L+ Y+E+ PP D+ L Y + PL +L E YR
Sbjct: 57 AVLMKYFEDHPPQVDAFLVSCYSD------HPLVTTLRETYR 92
>SPCC126.15c |sec65||signal recognition particle subunit Sec65
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 199
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 431 PPMFDSPLGKGYK--EKDEAIVRPLALSLEEIYRGCLKKMKVQRL 559
P FD + ++ KD+AI+ PLA ++ ++ R K K++ L
Sbjct: 8 PIYFDKSRPRRFRCVPKDKAILNPLAKNIADVVRDLGYKCKLEPL 52
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 25.0 bits (52), Expect = 9.7
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +2
Query: 128 QYEIKRAYRRLALKYNPENYNNDENMKRIFALIGEAYEVLVDHK-----LRAVYDQYGEE 292
Q E +ALK E Y+N+ +F + E ++ +K L+ Y++ E+
Sbjct: 3035 QEEFNAKIEDMALKLLSEKYDNEAYQAELFYRLSNCVEKVLHNKISITDLKTEYEEILEQ 3094
Query: 293 GLKR 304
LK+
Sbjct: 3095 TLKK 3098
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 398 YADLLDYYENPPPMFDSPLGKGYKEKDEAI 487
++DL D Y NP P +P+ ++ AI
Sbjct: 140 FSDLKDLYSNPMPAQTTPVSMRMTKRQRAI 169
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 340 RVPRRAVEDISRVLRYNKPLRRFARLLRKPSTDVRFASGQ 459
R P A+ +S++ +RF + K S+++ F SG+
Sbjct: 763 RAPSEAINCLSKLAFQCHETKRFLYIDEKQSSEISFTSGE 802
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.0 bits (52), Expect = 9.7
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 437 MFDSPLGKGYKEKDEAIVRPLALSLEEIYRGCLKKMKVQRLVFTDETCSELKLREKVLS 613
+F L G + D A +RP LE +Y+ LVF DET + + ++L+
Sbjct: 2795 IFTDILKNGLEFLDFASLRP---KLESLYKKFYSSHPNNTLVFVDETITHILRFHRILN 2850
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,752,260
Number of Sequences: 5004
Number of extensions: 58900
Number of successful extensions: 260
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -