Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6j13
         (660 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    25   0.64 
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    25   0.64 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   2.6  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   4.5  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   4.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.5  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   6.0  

>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 170 YNPENYNNDENMKRIF 217
           YN +NYNN+ N K+++
Sbjct: 309 YNYKNYNNNYNSKKLY 324


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 170 YNPENYNNDENMKRIF 217
           YN +NYNN+ N K+++
Sbjct: 320 YNYKNYNNNYNSKKLY 335


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 149 YRRLALKYNPENYNNDENMK 208
           +R L    N +N+NND+++K
Sbjct: 284 FRSLQNSLNGKNFNNDDDIK 303


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 170 YNPENYNNDENMKRIF 217
           YN  NYNN+   K+++
Sbjct: 98  YNNNNYNNNNYNKKLY 113


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 170 YNPENYNNDENMKRIF 217
           YN  NYNN+   K+++
Sbjct: 98  YNNNNYNNNNYNKKLY 113


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 320  TEYIQPYAYHGEPLRTFHEFFGTTNPYADLLD 415
            T+YI  Y      +    EF G   PYA L+D
Sbjct: 939  TKYILQYKEGDAGIWQQQEFTGPPLPYAALID 970


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 320  TEYIQPYAYHGEPLRTFHEFFGTTNPYADLLD 415
            T+YI  Y      +    EF G   PYA L+D
Sbjct: 935  TKYILQYKEGDAGIWQQQEFTGPPLPYAALID 966


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +2

Query: 152 RRLALKYNPENYNNDENMKRIFALIGEAYEVLVD 253
           + + + YNPE  + D +M         ++EV++D
Sbjct: 413 KTIMVNYNPETVSTDYDMSDRLYFEEISFEVVMD 446


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,274
Number of Sequences: 438
Number of extensions: 4982
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)