Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6j12
         (712 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0007 + 212984-213949                                             29   4.8  
04_03_0974 + 21367304-21369634                                         28   6.4  

>09_01_0007 + 212984-213949
          Length = 321

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 45  VETDGEGAEPGPSVTEFEEEEDVPAR 122
           V     G+ PGP V   +EEE+ PAR
Sbjct: 169 VSLSSNGSAPGPIVLSSDEEEEEPAR 194


>04_03_0974 + 21367304-21369634
          Length = 776

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 10  TARGHWPASPSSLRPTVKAPSQDLL 84
           ++RG  P SP+ L+P V AP  D+L
Sbjct: 494 SSRGPSPVSPAILKPDVVAPGVDIL 518


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,754,039
Number of Sequences: 37544
Number of extensions: 292466
Number of successful extensions: 750
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)