Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6j08
         (106 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    21   7.0  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    21   7.0  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    21   7.0  

>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +1

Query: 10  IPDSILDAFLKYNYHHK 60
           +  S++   L  NYHH+
Sbjct: 288 VASSVVSTILILNYHHR 304


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +1

Query: 10  IPDSILDAFLKYNYHHK 60
           +  S++   L  NYHH+
Sbjct: 320 VASSVVSTILILNYHHR 336


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 4    KRIPDSILDAFLKYNYHHK 60
            K+ P    D F +YN +HK
Sbjct: 975  KQYPHLFKDYFSQYNKNHK 993


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,922
Number of Sequences: 2352
Number of extensions: 662
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 15
effective length of database: 528,699
effective search space used: 10045281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)