Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6i23
         (614 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr...    31   0.86 
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p...    31   0.86 
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr...    31   0.86 
AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical...    29   2.0  
AL132862-12|CAB60542.1|  380|Caenorhabditis elegans Hypothetical...    28   6.1  

>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical protein
            C34E11.3 protein.
          Length = 1577

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +2

Query: 431  DEVDEVRAGARGRYGVNEVREGEIGRNGELVEFEKVILEEIIVMECNKVEMGV 589
            + +DE R   RG +G+ + R  E  +NG+  +FE+      ++    +VE GV
Sbjct: 1444 EAIDEPRTDKRGFFGIRKSRSVETTQNGKHSKFEEA-ANSALMHSLGQVEEGV 1495


>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
            protein C34E11.3 protein.
          Length = 1577

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +2

Query: 431  DEVDEVRAGARGRYGVNEVREGEIGRNGELVEFEKVILEEIIVMECNKVEMGV 589
            + +DE R   RG +G+ + R  E  +NG+  +FE+      ++    +VE GV
Sbjct: 1444 EAIDEPRTDKRGFFGIRKSRSVETTQNGKHSKFEEA-ANSALMHSLGQVEEGV 1495


>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical protein
            C34E11.3 protein.
          Length = 1577

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +2

Query: 431  DEVDEVRAGARGRYGVNEVREGEIGRNGELVEFEKVILEEIIVMECNKVEMGV 589
            + +DE R   RG +G+ + R  E  +NG+  +FE+      ++    +VE GV
Sbjct: 1444 EAIDEPRTDKRGFFGIRKSRSVETTQNGKHSKFEEA-ANSALMHSLGQVEEGV 1495


>AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical
           protein Y73F8A.16 protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 259 YNITMETKLFVKIFLSNQYVMNLMKIKPFKTENYYKSMR*GNERENTNISNE 414
           +++ ME   F  + + NQ  +   K K  K   Y   +  GN+R+NT+ S E
Sbjct: 154 HSMRMEVAQFFPVTVYNQESIGNWKSKFHKNSTYGNRLDGGNKRKNTDSSEE 205


>AL132862-12|CAB60542.1|  380|Caenorhabditis elegans Hypothetical
           protein Y73F8A.17 protein.
          Length = 380

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 259 YNITMETKLFVKIFLSNQYVMNLMKIKPFKTENYYKSMR*GNERENTNISNE 414
           +++ ME   F  + + NQ  +   K K  K   +   +  GN+R+NTN   E
Sbjct: 154 HSMRMEVAQFFPVTVYNQESIGNWKSKFHKNATFENRLDGGNKRKNTNSREE 205


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,281,737
Number of Sequences: 27780
Number of extensions: 179068
Number of successful extensions: 439
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)