Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6i14
         (315 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0608 + 30329174-30329362,30329681-30329907,30330035-303301...    27   3.1  
04_01_0367 + 4834602-4835489,4836117-4836644                           26   5.4  
02_05_0607 - 30315982-30316215,30316688-30316831,30316902-303169...    26   5.4  
09_04_0257 + 16170914-16171113,16171362-16171554,16171929-161720...    25   9.4  
01_01_0690 - 5306754-5307047,5307107-5307279,5308223-5308370,530...    25   9.4  

>02_05_0608 +
           30329174-30329362,30329681-30329907,30330035-30330190,
           30330893-30331078,30331184-30331368,30331571-30331602
          Length = 324

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 169 KNKFVSLISYYSVSCLLFSIL 231
           K+KF   + YY  +CLLFS+L
Sbjct: 264 KHKFDGPLHYYVFNCLLFSLL 284


>04_01_0367 + 4834602-4835489,4836117-4836644
          Length = 471

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 57  PKEFDNEIMNLLKKHAKNEDKIALRQPDL 143
           P+  DN +    ++H KN D + L +P+L
Sbjct: 402 PRARDNPLEFRPERHLKNTDNVVLAEPEL 430


>02_05_0607 -
           30315982-30316215,30316688-30316831,30316902-30316989,
           30317829-30317934,30318398-30318552,30318630-30318699,
           30319940-30320106,30320827-30320894,30322764-30322867,
           30322937-30323107,30323113-30323238,30323496-30323663,
           30323725-30323908,30324139-30324534
          Length = 726

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 66  FDNEIMNLLKKHAKNEDKIALRQPD 140
           +D+E+M +LK+    +DK +LR  D
Sbjct: 380 YDDEVMAMLKERVAQKDKKSLRMVD 404


>09_04_0257 +
           16170914-16171113,16171362-16171554,16171929-16172034,
           16172293-16172415,16172739-16172830,16173276-16173376,
           16173458-16173524,16174016-16174108,16174247-16174375
          Length = 367

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
 Frame = -3

Query: 133 CRSAILSSFLAC-----FLRRFIISLSNSL 59
           C S +L SF+AC     F   F+  LSNSL
Sbjct: 38  CESLLLGSFMACRVVLNFFFFFLFHLSNSL 67


>01_01_0690 -
           5306754-5307047,5307107-5307279,5308223-5308370,
           5309110-5309356,5309694-5309839,5312482-5312707,
           5313652-5313874,5314054-5314202,5315345-5315514,
           5316064-5316135,5317610-5317741,5317813-5317900,
           5319440-5319656,5320123-5320306,5320644-5320727,
           5321148-5321242,5321519-5321562,5321707-5322367,
           5323053-5323356
          Length = 1218

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +3

Query: 21  DIFYWIVEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQPDLH*NENAVLK 170
           D +Y +    PT K   NE+  +L     + D +  + P LH  +  VLK
Sbjct: 785 DCYYLMGTADPTGKLGPNEVCVILDYGQVSGDVLVYKYPGLHPGDIHVLK 834


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,327,301
Number of Sequences: 37544
Number of extensions: 79626
Number of successful extensions: 195
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 386885760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)