Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6i14
         (315 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002331-1|AAH02331.1|  166|Homo sapiens chromosome 11 open read...    64   6e-11
AK000494-1|BAA91204.1|  166|Homo sapiens protein ( Homo sapiens ...    64   6e-11
BC128152-1|AAI28153.1|  446|Homo sapiens AGBL1 protein protein.        29   2.9  
AK056872-1|BAB71299.1|  478|Homo sapiens protein ( Homo sapiens ...    29   2.9  

>BC002331-1|AAH02331.1|  166|Homo sapiens chromosome 11 open reading
           frame 79 protein.
          Length = 166

 Score = 64.5 bits (150), Expect = 6e-11
 Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = +3

Query: 6   PSNDWDIFYWIVEKKPTPKEFDNEIMNLLKKHAKNEDK-IALRQPDL 143
           PSNDWDI+YW  E KP P+ F+NE+M LL+  AKN++K   LR PDL
Sbjct: 112 PSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKNKEQRLRAPDL 158


>AK000494-1|BAA91204.1|  166|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20487 fis, clone KAT08245. ).
          Length = 166

 Score = 64.5 bits (150), Expect = 6e-11
 Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = +3

Query: 6   PSNDWDIFYWIVEKKPTPKEFDNEIMNLLKKHAKNEDK-IALRQPDL 143
           PSNDWDI+YW  E KP P+ F+NE+M LL+  AKN++K   LR PDL
Sbjct: 112 PSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKNKEQRLRAPDL 158


>BC128152-1|AAI28153.1|  446|Homo sapiens AGBL1 protein protein.
          Length = 446

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 128 PTTRSTLKRKCSVKRINLF 184
           PTT+  L+RKC V+RI +F
Sbjct: 195 PTTQPMLERKCGVQRIRIF 213


>AK056872-1|BAB71299.1|  478|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32310 fis, clone PROST2003102. ).
          Length = 478

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 128 PTTRSTLKRKCSVKRINLF 184
           PTT+  L+RKC V+RI +F
Sbjct: 227 PTTQPMLERKCGVQRIRIF 245


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,667,771
Number of Sequences: 237096
Number of extensions: 506297
Number of successful extensions: 872
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)