Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6i14
         (315 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase...    28   1.2  
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de...    28   1.2  
AC084160-4|AAK39374.1|  240|Caenorhabditis elegans Hypothetical ...    28   1.2  
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ...    28   1.6  
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical...    28   1.6  
AL117195-22|CAB55034.1|  119|Caenorhabditis elegans Hypothetical...    27   2.1  
U39472-8|AAP86618.1|  338|Caenorhabditis elegans Serpentine rece...    27   3.8  
U39998-4|AAN60511.1|  351|Caenorhabditis elegans Hypothetical pr...    26   5.0  
U39998-3|AAO38584.1|  460|Caenorhabditis elegans Hypothetical pr...    26   5.0  
U39998-2|AAL00881.1|  484|Caenorhabditis elegans Hypothetical pr...    26   5.0  
U39998-1|AAO38583.1|  475|Caenorhabditis elegans Hypothetical pr...    26   5.0  
Z81050-4|CAB02854.1|  329|Caenorhabditis elegans Hypothetical pr...    26   6.6  
U41036-8|ABA61866.1|  590|Caenorhabditis elegans Dopamine recept...    26   6.6  
U41036-7|ABA61865.1|  607|Caenorhabditis elegans Dopamine recept...    26   6.6  
U41036-6|ABA61864.1|  605|Caenorhabditis elegans Dopamine recept...    26   6.6  
AY485309-1|AAR37416.1|  607|Caenorhabditis elegans DOP-3 protein.      26   6.6  
AL132860-20|CAB60503.2|  263|Caenorhabditis elegans Hypothetical...    25   8.7  

>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
            beta homolog EGL-8 protein.
          Length = 1431

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 60   KEFDNEIMNLLKKHAKNEDKIALRQP 137
            K F  E+ +L KKH K  D I  +QP
Sbjct: 1142 KRFQKELDDLRKKHQKQRDSIQKQQP 1167


>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
            defective protein 8,isoform b protein.
          Length = 1431

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 60   KEFDNEIMNLLKKHAKNEDKIALRQP 137
            K F  E+ +L KKH K  D I  +QP
Sbjct: 1142 KRFQKELDDLRKKHQKQRDSIQKQQP 1167


>AC084160-4|AAK39374.1|  240|Caenorhabditis elegans Hypothetical
           protein Y73B3B.2 protein.
          Length = 240

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 39  VEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 137
           +  KP+  +FD+E MNLLK    N+ KI    P
Sbjct: 193 INPKPSQPQFDDEQMNLLKS-IINQSKIVSMMP 224


>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 39  VEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 137
           +  KP+  +FD+E MNLLK    N+ KI    P
Sbjct: 29  INPKPSQPQFDDEQMNLLKS-IINQSKIVPMMP 60


>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 39  VEKKPTPKEFDNEIMNLLKKHAKNEDKIALRQP 137
           +  KP+  +FD+E MNLLK    N+ KI    P
Sbjct: 29  INPKPSQPQFDDEQMNLLKS-IINQSKIVPMMP 60


>AL117195-22|CAB55034.1|  119|Caenorhabditis elegans Hypothetical
           protein Y57A10A.29 protein.
          Length = 119

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 9/29 (31%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 15  DWDIFYWIVEKKPTPKEFDN-EIMNLLKK 98
           +WD+FY++  KK  P++ ++ ++   +KK
Sbjct: 81  EWDLFYYLSNKKSPPEDVESCQVYQKVKK 109


>U39472-8|AAP86618.1|  338|Caenorhabditis elegans Serpentine
           receptor, class a (alpha)protein 32 protein.
          Length = 338

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 198 ITNQRNKFILLTLHFRFNVDRVVGVQFYLHF 106
           + N   +F+ + +    NVDR++ + F  HF
Sbjct: 114 VLNSCVRFLFIAIELALNVDRIIVILFRKHF 144


>U39998-4|AAN60511.1|  351|Caenorhabditis elegans Hypothetical
           protein ZK622.3c protein.
          Length = 351

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +3

Query: 9   SNDWDIFYWIVEKKPTPKEFD----NEIMNLLKKHAKNEDK 119
           SN+W   +W+ EK P          NE++ L+K   +NE +
Sbjct: 110 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 150


>U39998-3|AAO38584.1|  460|Caenorhabditis elegans Hypothetical
           protein ZK622.3d protein.
          Length = 460

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +3

Query: 9   SNDWDIFYWIVEKKPTPKEFD----NEIMNLLKKHAKNEDK 119
           SN+W   +W+ EK P          NE++ L+K   +NE +
Sbjct: 219 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 259


>U39998-2|AAL00881.1|  484|Caenorhabditis elegans Hypothetical
           protein ZK622.3b protein.
          Length = 484

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +3

Query: 9   SNDWDIFYWIVEKKPTPKEFD----NEIMNLLKKHAKNEDK 119
           SN+W   +W+ EK P          NE++ L+K   +NE +
Sbjct: 243 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 283


>U39998-1|AAO38583.1|  475|Caenorhabditis elegans Hypothetical
           protein ZK622.3a protein.
          Length = 475

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +3

Query: 9   SNDWDIFYWIVEKKPTPKEFD----NEIMNLLKKHAKNEDK 119
           SN+W   +W+ EK P          NE++ L+K   +NE +
Sbjct: 234 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 274


>Z81050-4|CAB02854.1|  329|Caenorhabditis elegans Hypothetical
           protein C50B6.5 protein.
          Length = 329

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 122 NFIFIFSMFFEKIHNFIVK 66
           N +FI+++FFE  H F+ K
Sbjct: 260 NSMFIYAVFFEARHEFLAK 278


>U41036-8|ABA61866.1|  590|Caenorhabditis elegans Dopamine receptor
           protein 3, isoformc protein.
          Length = 590

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 127 SAILSSFLACFLRRFIISLSNSL 59
           + +L+ FL C+L  F++ LSNS+
Sbjct: 511 AVVLAVFLFCWLPFFVLHLSNSI 533


>U41036-7|ABA61865.1|  607|Caenorhabditis elegans Dopamine receptor
           protein 3, isoformb protein.
          Length = 607

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 127 SAILSSFLACFLRRFIISLSNSL 59
           + +L+ FL C+L  F++ LSNS+
Sbjct: 528 AVVLAVFLFCWLPFFVLHLSNSI 550


>U41036-6|ABA61864.1|  605|Caenorhabditis elegans Dopamine receptor
           protein 3, isoforma protein.
          Length = 605

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 127 SAILSSFLACFLRRFIISLSNSL 59
           + +L+ FL C+L  F++ LSNS+
Sbjct: 526 AVVLAVFLFCWLPFFVLHLSNSI 548


>AY485309-1|AAR37416.1|  607|Caenorhabditis elegans DOP-3 protein.
          Length = 607

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 127 SAILSSFLACFLRRFIISLSNSL 59
           + +L+ FL C+L  F++ LSNS+
Sbjct: 528 AVVLAVFLFCWLPFFVLHLSNSI 550


>AL132860-20|CAB60503.2|  263|Caenorhabditis elegans Hypothetical
           protein Y56A3A.22 protein.
          Length = 263

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 42  EKKPTPKEFDNEIMNLLKKHAKNEDKIA 125
           EK+PTPK+ D++   + +     E K+A
Sbjct: 36  EKEPTPKKPDDQKWKMFRMTMSEEQKLA 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,236,542
Number of Sequences: 27780
Number of extensions: 91071
Number of successful extensions: 304
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)