Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6i08
(766 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0138 + 5837813-5838490,5839000-5839164,5839289-5839426,583... 158 5e-39
01_06_0459 + 29538025-29538579,29539190-29539354,29539448-295395... 144 5e-35
01_06_0648 - 30844289-30844341,30844536-30844648,30845435-308454... 118 7e-27
01_07_0301 + 42607239-42607277,42607374-42607577,42607669-426079... 108 5e-24
05_06_0132 + 25893241-25893435,25894266-25894487,25894567-258948... 103 2e-22
01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489... 94 1e-19
01_05_0343 + 21155237-21155496,21155596-21155842,21155939-211560... 48 1e-05
06_03_0810 - 24817268-24817350,24817547-24817697,24818441-248185... 34 0.11
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308... 33 0.25
09_04_0704 + 19623046-19623386,19623583-19623792,19623872-196242... 29 5.4
07_03_0959 - 22885750-22886001,22886073-22886195,22886343-228864... 28 7.1
05_01_0168 + 1162459-1162785,1163609-1163719,1163853-1163969,116... 28 7.1
01_06_0910 - 32922459-32922646,32922725-32922823,32923371-329235... 28 7.1
11_01_0710 - 5830475-5830595,5831498-5834124 28 9.4
07_03_1049 + 23566140-23566403,23567453-23567525,23567591-235677... 28 9.4
07_03_0960 - 22902279-22902530,22902604-22902726,22902855-229029... 28 9.4
02_04_0550 - 23795957-23796154,23796596-23796650,23797324-237973... 28 9.4
>03_02_0138 +
5837813-5838490,5839000-5839164,5839289-5839426,
5839496-5839647,5839754-5839862,5840551-5840649,
5840739-5840804,5840891-5840998,5841820-5841906
Length = 533
Score = 158 bits (383), Expect = 5e-39
Identities = 77/199 (38%), Positives = 116/199 (58%), Gaps = 1/199 (0%)
Frame = +1
Query: 166 PDTQYSRLDNGLTIATEERESYNTC-VGLFIDAGSRYEDNFENGVGHFFEHLAFKGTKCR 342
P+T+ + L NGL +ATE + T VG++IDAGSRYE GV HF EH+ FKGT R
Sbjct: 97 PETRVTTLPNGLRVATESSLASRTATVGVWIDAGSRYETEDSAGVAHFVEHMLFKGTGDR 156
Query: 343 TKTLLEDQISSSGAIFKCFTTREMVAYYADCLSYDLPRVVEILTDCIYNNNFATADIELQ 522
LE++I + G +T+RE YYA L D+PR + IL D + ++ + IE +
Sbjct: 157 NAAQLEEEIENIGGHLNAYTSREQTTYYAKVLDKDVPRALNILADILQHSKLEESRIERE 216
Query: 523 RKIVYAEMIEQDKNSNTVLYDYLHSTAFQGTPLAQTVMGPSCNLYNFTDMTISRYLAKRF 702
R ++ EM E + V++D+LH+TAFQ T L + ++G + N+ + T + +Y+ +
Sbjct: 217 RDVILREMEEVEGQYEEVIFDHLHATAFQYTSLGRPILGSAENVKSITQEDLQKYIETHY 276
Query: 703 DPARTVLVAVGGVKHDQMV 759
R V+ A G VKHD +V
Sbjct: 277 TAPRMVITAAGAVKHDDIV 295
>01_06_0459 +
29538025-29538579,29539190-29539354,29539448-29539585,
29539685-29539836,29539949-29540057,29540281-29540379,
29541051-29541116,29541208-29541315,29541428-29541553
Length = 505
Score = 144 bits (350), Expect = 5e-35
Identities = 77/220 (35%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Frame = +1
Query: 109 TPVRNRPYPIPFIDFLKNIPDTQYSRLDNGLTIATEERESYN--TCVGLFIDAGSRYEDN 282
+PV P PF+ +PD + S L GL I T+ + VG+++DAGSR+E
Sbjct: 39 SPVPRDPDHSPFL----RLPDARVSTLPTGLRIVTQAYPAATRMASVGVWVDAGSRFELP 94
Query: 283 FENGVGHFFEHLAFKGTKCR-TKTLLEDQISSSGAIFKCFTTREMVAYYADCLSYDLPRV 459
NG HF EH+AFKGT R T LE +I + GA +T+RE Y+AD D+P
Sbjct: 95 GTNGTAHFLEHMAFKGTTRRPTANALEVEIENMGARLNAYTSREQTTYFADVQGRDVPIA 154
Query: 460 VEILTDCIYNNNFATADIELQRKIVYAEMIEQDKNSNTVLYDYLHSTAFQGTPLAQTVMG 639
+++L+D + F ++ +R ++ EM E + V++D+LH+ AFQG PL T++G
Sbjct: 155 LDVLSDILQYPCFPANALQRERGVILREMEEVQGMMDEVIFDHLHAAAFQGHPLGDTILG 214
Query: 640 PSCNLYNFTDMTISRYLAKRFDPARTVLVAVGGVKHDQMV 759
P N+ + + + +Y+ + R V+ A G V HD++V
Sbjct: 215 PVENIKSISKKDLEQYITTHYTCPRMVVSAAGAVNHDEVV 254
>01_06_0648 -
30844289-30844341,30844536-30844648,30845435-30845484,
30845572-30845642,30845725-30845797,30846744-30846841,
30846936-30847002,30847150-30847230,30847312-30847479,
30847563-30847730,30847813-30848109,30848205-30848426,
30849287-30849325
Length = 499
Score = 118 bits (283), Expect = 7e-27
Identities = 69/220 (31%), Positives = 110/220 (50%)
Frame = +1
Query: 100 PVVTPVRNRPYPIPFIDFLKNIPDTQYSRLDNGLTIATEERESYNTCVGLFIDAGSRYED 279
P+ P+ P P DF++ T+ + L NG+ IA+E S VGL+ID GS YE
Sbjct: 47 PLDVPLPGITLPPPLPDFVEP-SKTKVTTLPNGIKIASETSVSPAASVGLYIDCGSIYET 105
Query: 280 NFENGVGHFFEHLAFKGTKCRTKTLLEDQISSSGAIFKCFTTREMVAYYADCLSYDLPRV 459
+G H E +AFK T R+ L ++ + G +RE + Y D +P +
Sbjct: 106 PASSGASHLLERMAFKSTTNRSHLRLVREVEAIGGNVSASASREQMCYTYDAFKAYVPEM 165
Query: 460 VEILTDCIYNNNFATADIELQRKIVYAEMIEQDKNSNTVLYDYLHSTAFQGTPLAQTVMG 639
VE+L D + N F +I+ Q + + AE+ E N +L + LHS + G LA+ +M
Sbjct: 166 VEVLIDSVRNPAFFNWEIKEQLEKIKAEIAEVSDNPQGLLLEALHSAGYSGA-LAKPLMA 224
Query: 640 PSCNLYNFTDMTISRYLAKRFDPARTVLVAVGGVKHDQMV 759
P ++ + ++A+ + R VL A GV+HD++V
Sbjct: 225 PQSAIHRLDSSILEEFIAENYTAPRMVL-AASGVEHDELV 263
>01_07_0301 +
42607239-42607277,42607374-42607577,42607669-42607965,
42608055-42608222,42608393-42608560,42608653-42608733,
42608844-42608910,42609326-42609423,42609665-42609737,
42609826-42609896,42610013-42610062,42610145-42610257,
42610341-42610384
Length = 490
Score = 108 bits (259), Expect = 5e-24
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 6/216 (2%)
Frame = +1
Query: 130 YPIPFIDFLKNIPD------TQYSRLDNGLTIATEERESYNTCVGLFIDAGSRYEDNFEN 291
+P+P +D + +PD T+ + L NG+ +A+E+ + CVG+F+D+GS YE
Sbjct: 44 HPLPGLDVPQCLPDQLGVQPTRVTTLPNGVRVASEDLPGPSACVGVFVDSGSVYETAETA 103
Query: 292 GVGHFFEHLAFKGTKCRTKTLLEDQISSSGAIFKCFTTREMVAYYADCLSYDLPRVVEIL 471
GV H E L+FK T R+ + + ++G +RE Y + L LP+ +E+L
Sbjct: 104 GVSHLLERLSFKDTAHRSHLQIVQDVEATGGNIGASASREQTVYSYETLKAYLPQAIEVL 163
Query: 472 TDCIYNNNFATADIELQRKIVYAEMIEQDKNSNTVLYDYLHSTAFQGTPLAQTVMGPSCN 651
DC+ N F ++E Q E+ E KN L + L+ + G LA ++ P +
Sbjct: 164 IDCVRNPLFLQDEVERQVAFAREEVQELQKNPERFLQESLNLVGYTGA-LANPLVAPEES 222
Query: 652 LYNFTDMTISRYLAKRFDPARTVLVAVGGVKHDQMV 759
L I ++ + F R V VA GV H ++
Sbjct: 223 LTRINGSIIQKFYHENFTADRLV-VAASGVDHQYLL 257
>05_06_0132 +
25893241-25893435,25894266-25894487,25894567-25894863,
25894944-25895111,25895201-25895368,25895456-25895536,
25895704-25895770,25895874-25895971,25896587-25896659,
25896753-25896823,25896919-25896968,25897698-25897810,
25898182-25898300,25898629-25898721,25899025-25899051,
25899422-25899823,25900467-25900513,25900612-25900651,
25900733-25900795,25900881-25901018,25901873-25902031,
25902111-25902164,25902324-25902392,25902514-25902643,
25902909-25902949,25903133-25903178,25903200-25903357,
25903560-25903605,25903702-25903853,25904022-25904243
Length = 1202
Score = 103 bits (246), Expect = 2e-22
Identities = 61/207 (29%), Positives = 106/207 (51%)
Frame = +1
Query: 139 PFIDFLKNIPDTQYSRLDNGLTIATEERESYNTCVGLFIDAGSRYEDNFENGVGHFFEHL 318
P DF++ T+ + L NG+ IA+E VGL+ID GS YE + +G H E +
Sbjct: 112 PLPDFVEP-SKTKITTLPNGIKIASETSPIPAVSVGLYIDCGSVYETSSSSGTSHLLERM 170
Query: 319 AFKGTKCRTKTLLEDQISSSGAIFKCFTTREMVAYYADCLSYDLPRVVEILTDCIYNNNF 498
AFK T R+ L ++ + G +RE ++Y D L P +VE+L D + N F
Sbjct: 171 AFKSTTNRSHLRLVREVEAIGGNVFASASREQMSYTYDALKCYAPEMVEVLIDSVRNPAF 230
Query: 499 ATADIELQRKIVYAEMIEQDKNSNTVLYDYLHSTAFQGTPLAQTVMGPSCNLYNFTDMTI 678
+++ Q + + +E+ E + + +L + LHS + G LA+ +M + T+
Sbjct: 231 LEWEVKEQLQKIKSEISEVSGDPHGLLMEALHSAGYSGA-LAKPLMASESAVNRLDVATL 289
Query: 679 SRYLAKRFDPARTVLVAVGGVKHDQMV 759
++++ + R VL A G++HD++V
Sbjct: 290 EEFVSENYTAPRMVL-AASGIEHDELV 315
>01_01_0645 +
4890647-4890682,4891684-4891929,4892021-4892317,
4892407-4892574,4892674-4892841,4892924-4893004,
4893105-4893171,4893657-4893751,4894027-4894099,
4894177-4894247,4894325-4894374,4895263-4895375,
4895461-4895513
Length = 505
Score = 94.3 bits (224), Expect = 1e-19
Identities = 57/196 (29%), Positives = 97/196 (49%)
Frame = +1
Query: 172 TQYSRLDNGLTIATEERESYNTCVGLFIDAGSRYEDNFENGVGHFFEHLAFKGTKCRTKT 351
T+ + L NG+ IA+E + VG++++ GS +E G + +A+ T R+
Sbjct: 77 TKITTLANGVKIASETTPGPSCSVGVYVNCGSVHEAPETLGATQLLKKMAYTTTTNRSHL 136
Query: 352 LLEDQISSSGAIFKCFTTREMVAYYADCLSYDLPRVVEILTDCIYNNNFATADIELQRKI 531
+ +I + G K REM++Y L +P +VE+L DC+ N F +++ Q
Sbjct: 137 RVVREIEAVGGNVKASANREMMSYSYAALKTYMPEMVEVLIDCVRNPAFLDWEVKEQIMK 196
Query: 532 VYAEMIEQDKNSNTVLYDYLHSTAFQGTPLAQTVMGPSCNLYNFTDMTISRYLAKRFDPA 711
+ AE+ E N T L + LHST + G LA ++ ++ + +LA+ +
Sbjct: 197 LKAELAEASSNPETFLLEALHSTGYSGA-LATPLIASESSVSRLNTNVLEYFLAENYTAP 255
Query: 712 RTVLVAVGGVKHDQMV 759
R VL A GV HD++V
Sbjct: 256 RIVLAAT-GVDHDELV 270
>01_05_0343 +
21155237-21155496,21155596-21155842,21155939-21156064,
21156291-21156428,21156513-21156650,21156756-21157013,
21157404-21157541,21158023-21158092,21158267-21158480,
21158614-21158719,21159844-21160077,21160836-21161000,
21161083-21161232,21161308-21161399,21161631-21161712,
21161800-21161883,21161980-21162096,21162179-21162289,
21162698-21162892,21164495-21164575,21165671-21165720,
21165978-21165990,21166518-21166600,21166693-21166833,
21166879-21166936,21167023-21167072,21167474-21167582,
21167666-21167727,21168321-21168363
Length = 1204
Score = 47.6 bits (108), Expect = 1e-05
Identities = 49/204 (24%), Positives = 80/204 (39%), Gaps = 10/204 (4%)
Frame = +1
Query: 178 YSRLDNGLT--IATEERESYNTCVGLFIDAGSRYEDNFENGVGHFFEHLAFKGTKCRTKT 351
Y RL NGL + + + + L + GS E+ E GV H EHLAF T T
Sbjct: 57 YGRLANGLAYYVRSNPKPRMRAALSLAVKVGSVVEEEDERGVAHIVEHLAFSATSRYTNH 116
Query: 352 LLEDQISSSGAIF-KC--FTTREMVAYYADCLSYDLP----RVVEILTDCIYNNNFATAD 510
+ + S GA F C T Y + D P + + +L + + D
Sbjct: 117 DIVKFLESIGAEFGACQNALTSSDETIYELLVPVDKPGLLSQAISVLAEFSSEVRVSAED 176
Query: 511 IELQRKIVYAEMIEQDKNSNTVLYDYLHSTAFQGTPLAQTV-MGPSCNLYNFTDMTISRY 687
+E +R V E +N+ + D + F+G+ A+ + +G + T+ +
Sbjct: 177 LEKERGAVLEE-YRGGRNATGRMQDSHWALLFEGSKYAERLPIGTEKVIRTVPHETVRHF 235
Query: 688 LAKRFDPARTVLVAVGGVKHDQMV 759
K + + + AVG Q V
Sbjct: 236 YHKWYHLSNMAVFAVGDFPDTQAV 259
>06_03_0810 -
24817268-24817350,24817547-24817697,24818441-24818542,
24818722-24818802,24818900-24819020,24819284-24819401,
24819514-24819637,24819898-24819963,24820117-24820407,
24820455-24820592,24820967-24821116,24821240-24821410,
24821543-24821746,24821880-24822104,24822461-24822595,
24822995-24823096,24823586-24823882,24823979-24824167,
24824581-24824628,24824872-24825070,24825501-24825730,
24826373-24826568,24826695-24826882
Length = 1202
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 253 IDAGSRYEDNFENGVGHFFEHLAFKGTKCRTKTL 354
+ GS E+ E G+ H EH+AF G+K R K L
Sbjct: 212 VHVGSIDEEEDEQGIAHMIEHVAFLGSKKREKLL 245
>03_02_0924 +
12429764-12430120,12430562-12430637,12430803-12430849,
12431850-12431962,12432056-12432129,12432258-12432353,
12432440-12432559,12432660-12432893,12433486-12433634,
12434145-12434301,12434387-12434542,12435359-12435735,
12435871-12436020,12437071-12437253,12437440-12437643,
12437869-12437975,12438253-12438406,12438796-12438917,
12439541-12439787
Length = 1040
Score = 33.1 bits (72), Expect = 0.25
Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 1/153 (0%)
Frame = +1
Query: 184 RLDNGLTIATEERESYNTCVGLFIDAGSRYEDNFENGVGHFFEHLAFKG-TKCRTKTLLE 360
R + G + ++ + CVG+ GS + G+ HF EH+ F G ++ + +
Sbjct: 107 RKEKGSSEPLVKKAAAAMCVGM----GSFADPPKAQGLAHFLEHMLFMGSSEFPDENEYD 162
Query: 361 DQISSSGAIFKCFTTREMVAYYADCLSYDLPRVVEILTDCIYNNNFATADIELQRKIVYA 540
+S G FT E Y+ + L ++ + + ++ + V +
Sbjct: 163 SYLSKHGGSSNAFTETEYTCYHFEVKREYLKGALDRFSQFFVSPLVKAEAMDREILAVDS 222
Query: 541 EMIEQDKNSNTVLYDYLHSTAFQGTPLAQTVMG 639
E + ++ + LY T QG PL + G
Sbjct: 223 EFNQVLQSDSCRLYQLQSHTCSQGHPLNRFTWG 255
>09_04_0704 +
19623046-19623386,19623583-19623792,19623872-19624223,
19624320-19624444,19624578-19624668,19624817-19625050
Length = 450
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = -2
Query: 648 TARSHYGLRERRTLKCCGMQVIVKYSVRIFVLFDHFRVNNLSLKFDVSRRKVVIIY 481
T+ G+ R + G+ V + +V +V HF VN + + + +++IY
Sbjct: 105 TSAPETGVLMNRAQRLLGILVAILGAVNFYVRSQHFTVNTVLIMLQILCSDIIVIY 160
>07_03_0959 -
22885750-22886001,22886073-22886195,22886343-22886429,
22886504-22886555,22886701-22886825,22887002-22887213,
22887317-22887518,22887928-22888032,22889643-22889704,
22889998-22890187,22890260-22890355,22890442-22890544,
22891448-22891551,22893284-22893370,22894033-22894118,
22894397-22894489,22895615-22895777,22895899-22896011,
22896113-22896235,22897393-22897444,22897843-22897886,
22897975-22898048,22898133-22898224,22899374-22899441,
22900817-22900892,22900952-22901215
Length = 1015
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 292 GVGHFFEHLAFKGT-KCRTKTLLEDQISSSGAIFKCFTTREMVAYYAD 432
G+ HF EH+ F + K + I+ G FT RE +Y D
Sbjct: 108 GLAHFLEHMLFYASEKYPVEDDYSKYIAEHGGSTNAFTCRERTNFYFD 155
>05_01_0168 +
1162459-1162785,1163609-1163719,1163853-1163969,
1164082-1164240,1164663-1164797,1165116-1165268,
1165358-1165479,1165599-1166541,1166677-1166728,
1166873-1167963,1168058-1168384,1168479-1168559,
1168649-1168717,1168809-1168937,1169038-1169121,
1169210-1169275
Length = 1321
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +1
Query: 262 GSRYEDNFENGVGHFFEHLAF--KGTKCRTKTLLEDQISSS 378
GSR NG GH F L F KGT+ ++ T L + I S
Sbjct: 697 GSRKSVGLRNGDGHKFSRLKFSYKGTQLQSSTPLFESILRS 737
>01_06_0910 -
32922459-32922646,32922725-32922823,32923371-32923502,
32923585-32923743,32924553-32924711,32924897-32925052,
32925846-32926044
Length = 363
Score = 28.3 bits (60), Expect = 7.1
Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 3/135 (2%)
Frame = +1
Query: 115 VRNRPYPIPFIDFLKNIPDTQYSRLDNGLTIATEERESYNTCVGLF--IDAGSRYEDNFE 288
V N P+P + F +N T S N AT+ + + G F + AG + N
Sbjct: 87 VENIPHP-KLVKFFENYMITCVSAGWNHSGFATDSGQLFMCGDGSFGQLGAGDNHPRNLP 145
Query: 289 NGVGHFF-EHLAFKGTKCRTKTLLEDQISSSGAIFKCFTTREMVAYYADCLSYDLPRVVE 465
V +F +H+ R +L S G F ++ + YD+PR+++
Sbjct: 146 FEVAYFTTKHVVRLALGMRHSLVLLKDNSVYG--FGSTRRGQIGRCTRNQKFYDVPRIID 203
Query: 466 ILTDCIYNNNFATAD 510
DC N +A D
Sbjct: 204 GFPDCKIGNIYANGD 218
>11_01_0710 - 5830475-5830595,5831498-5834124
Length = 915
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 238 KYCNFPFLQWQLSNHYPA 185
K+C P QW L +H PA
Sbjct: 677 KFCTLPLSQWSLLHHLPA 694
>07_03_1049 +
23566140-23566403,23567453-23567525,23567591-23567742,
23567835-23568524,23568643-23568869,23569118-23569208
Length = 498
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 381 RHLQMLHY*RNGGVLRRLSFLR 446
+H Q+LHY G+L R++FLR
Sbjct: 354 KHPQLLHYSIEDGILPRINFLR 375
>07_03_0960 -
22902279-22902530,22902604-22902726,22902855-22902941,
22903017-22903068,22903197-22903321,22903476-22903684,
22903990-22904191,22906205-22906309,22907264-22907325,
22907625-22907814,22907887-22907982,22908069-22908171,
22909117-22909220,22910239-22910325,22911238-22911323,
22911410-22911502,22912586-22912673,22912786-22912898,
22912989-22913111,22914473-22914524,22915185-22915286,
22915539-22915582,22915667-22915740,22915825-22915916,
22916566-22916633,22918572-22918647,22918767-22918952
Length = 997
Score = 27.9 bits (59), Expect = 9.4
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +1
Query: 226 SYNTCVGLFIDAGSRYEDNFENGVGHFFEHLAFKGT-KCRTKTLLEDQISSSGAIFKCFT 402
S N VG F D + E G+ HF EH+ F + K + I+ G FT
Sbjct: 66 SMNVSVGYFCDP-----EGLE-GLAHFLEHMLFYASEKYPIEDSYSKYITEHGGSTNAFT 119
Query: 403 TREMVAYY----ADCLSYDLPRVVE 465
T E ++ DCL+ L R +
Sbjct: 120 TCEHTNFFFDVNHDCLNDALDRFAQ 144
>02_04_0550 -
23795957-23796154,23796596-23796650,23797324-23797376,
23797453-23797529,23797613-23797736,23797848-23797964,
23798439-23798547,23798724-23798829,23799043-23799106,
23799214-23799333
Length = 340
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +1
Query: 145 IDFLKNIPDTQYS---RLDNGLTIATEERESYNTC 240
+D++ N+P+ S RLD+ L + E RES N C
Sbjct: 81 VDYINNLPNAITSVCFRLDDDLQRSNEWRESLNPC 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,605,056
Number of Sequences: 37544
Number of extensions: 429038
Number of successful extensions: 954
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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