Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6i02
         (306 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O69825 Cluster: Putative peptide synthase; n=1; Strepto...    33   0.94 
UniRef50_A6DY13 Cluster: Patatin; n=1; Roseovarius sp. TM1035|Re...    31   5.0  
UniRef50_Q5KKX3 Cluster: Fermentation-related protein, putative;...    31   6.7  
UniRef50_A6G634 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  
UniRef50_A3FQK3 Cluster: Co-chaperone GrpE, putative; n=2; Crypt...    30   8.8  

>UniRef50_O69825 Cluster: Putative peptide synthase; n=1;
           Streptomyces coelicolor|Rep: Putative peptide synthase -
           Streptomyces coelicolor
          Length = 1171

 Score = 33.5 bits (73), Expect = 0.94
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -3

Query: 160 YWHLVLISFSLFFSRLPQLWVHHSSLVGILPAYRP 56
           Y HL+L ++SLF      L ++HS L G LP  RP
Sbjct: 749 YHHLILDAWSLFVLLRDSLEIYHSGLEGRLPELRP 783


>UniRef50_A6DY13 Cluster: Patatin; n=1; Roseovarius sp. TM1035|Rep:
           Patatin - Roseovarius sp. TM1035
          Length = 199

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 177 GDPLVDTGIWC*YPLVCSLVDFLNCGSITP 88
           G  LVD G+W   P++ ++++ L C  +TP
Sbjct: 53  GYQLVDGGVWANNPIMLAVIEALTCFDVTP 82


>UniRef50_Q5KKX3 Cluster: Fermentation-related protein, putative;
           n=2; Filobasidiella neoformans|Rep: Fermentation-related
           protein, putative - Cryptococcus neoformans
           (Filobasidiella neoformans)
          Length = 2933

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -3

Query: 160 YWHLVLISFSLFFSRLPQLWVHHSSL-VGILPAYRPAFLLAYRRAPHRAS 14
           YW+ +L SF  F  RL    VHH+ + +G L     A  L++R A + +S
Sbjct: 26  YWNRLLASFVAFLIRLYAWRVHHAYISIGSLQISPLAGRLSFRNAEYHSS 75


>UniRef50_A6G634 Cluster: Putative uncharacterized protein; n=1;
           Plesiocystis pacifica SIR-1|Rep: Putative
           uncharacterized protein - Plesiocystis pacifica SIR-1
          Length = 181

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -3

Query: 160 YWHLVLISFSLFFSRLPQLWVHHSSLVGILPAYRPAFLLA 41
           YW   ++     F+ L + W+   +L  + PAY  AF+LA
Sbjct: 49  YWMFFVLHTGWLFAWLAEAWLRGPALATLWPAYVGAFVLA 88


>UniRef50_A3FQK3 Cluster: Co-chaperone GrpE, putative; n=2;
           Cryptosporidium|Rep: Co-chaperone GrpE, putative -
           Cryptosporidium parvum Iowa II
          Length = 234

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = +2

Query: 35  AVCQEECRAVCREDTNKRGVMDPQLRKSTKEQTKGYQHQMPVS 163
           +VC+EE RA+   +  K GV+  ++ K+ ++   GY H++  S
Sbjct: 53  SVCEEEERAILEAEVAKIGVLQERI-KTLEKDASGYIHKIEES 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,059,074
Number of Sequences: 1657284
Number of extensions: 4338704
Number of successful extensions: 10231
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10221
length of database: 575,637,011
effective HSP length: 78
effective length of database: 446,368,859
effective search space used: 10266483757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)