Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6i02
         (306 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069185-1|AAL39330.1| 1385|Drosophila melanogaster GH23617p pro...    30   0.64 
AE014296-2853|AAF49385.1| 1385|Drosophila melanogaster CG3764-PA...    30   0.64 
AY061327-1|AAL28875.1|  719|Drosophila melanogaster LD24749p pro...    29   0.85 
AJ243916-1|CAB51032.1|  719|Drosophila melanogaster DOMINA prote...    29   0.85 
AJ243814-1|CAB51073.1|  719|Drosophila melanogaster DOMINA prote...    29   0.85 
AF264033-1|AAF91395.1|  719|Drosophila melanogaster winged-helix...    29   0.85 
AE014297-1143|AAF54525.1|  719|Drosophila melanogaster CG4029-PA...    29   0.85 
AB028890-1|BAA94598.1|  719|Drosophila melanogaster Winged-helix...    29   0.85 

>AY069185-1|AAL39330.1| 1385|Drosophila melanogaster GH23617p
           protein.
          Length = 1385

 Score = 29.9 bits (64), Expect = 0.64
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 41  CQEECRAVCREDTNKRGVMDPQLRKSTKEQTKGYQ-HQMPVSTK 169
           C E  RA  RED NK+ + D   +  TK QT   + H+ P + K
Sbjct: 605 CSEVRRAAKREDFNKQLINDLAAQSQTKNQTGTQERHKSPPTQK 648


>AE014296-2853|AAF49385.1| 1385|Drosophila melanogaster CG3764-PA
           protein.
          Length = 1385

 Score = 29.9 bits (64), Expect = 0.64
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 41  CQEECRAVCREDTNKRGVMDPQLRKSTKEQTKGYQ-HQMPVSTK 169
           C E  RA  RED NK+ + D   +  TK QT   + H+ P + K
Sbjct: 605 CSEVRRAAKREDFNKQLINDLAAQSQTKNQTGTQERHKSPPTQK 648


>AY061327-1|AAL28875.1|  719|Drosophila melanogaster LD24749p
           protein.
          Length = 719

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 68  REDTNKRGVMDPQLRKSTKEQTKGYQHQMPVS-TKGSPFKLGS 193
           RED+NKRG+      KS         HQM  + + GSP  L S
Sbjct: 322 REDSNKRGLQASTTPKSIASAANSPHHQMQSNYSLGSPSSLSS 364


>AJ243916-1|CAB51032.1|  719|Drosophila melanogaster DOMINA protein
           (WHN-homologue) protein.
          Length = 719

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 68  REDTNKRGVMDPQLRKSTKEQTKGYQHQMPVS-TKGSPFKLGS 193
           RED+NKRG+      KS         HQM  + + GSP  L S
Sbjct: 322 REDSNKRGLQASTTPKSIASAANSPHHQMQSNYSLGSPSSLSS 364


>AJ243814-1|CAB51073.1|  719|Drosophila melanogaster DOMINA protein
           protein.
          Length = 719

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 68  REDTNKRGVMDPQLRKSTKEQTKGYQHQMPVS-TKGSPFKLGS 193
           RED+NKRG+      KS         HQM  + + GSP  L S
Sbjct: 322 REDSNKRGLQASTTPKSIASAANSPHHQMQSNYSLGSPSSLSS 364


>AF264033-1|AAF91395.1|  719|Drosophila melanogaster winged-helix
           protein jumeaux protein.
          Length = 719

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 68  REDTNKRGVMDPQLRKSTKEQTKGYQHQMPVS-TKGSPFKLGS 193
           RED+NKRG+      KS         HQM  + + GSP  L S
Sbjct: 322 REDSNKRGLQASTTPKSIASAANSPHHQMQSNYSLGSPSSLSS 364


>AE014297-1143|AAF54525.1|  719|Drosophila melanogaster CG4029-PA
           protein.
          Length = 719

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 68  REDTNKRGVMDPQLRKSTKEQTKGYQHQMPVS-TKGSPFKLGS 193
           RED+NKRG+      KS         HQM  + + GSP  L S
Sbjct: 322 REDSNKRGLQASTTPKSIASAANSPHHQMQSNYSLGSPSSLSS 364


>AB028890-1|BAA94598.1|  719|Drosophila melanogaster Winged-helix
           nude transcriptionfactor protein.
          Length = 719

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 68  REDTNKRGVMDPQLRKSTKEQTKGYQHQMPVS-TKGSPFKLGS 193
           RED+NKRG+      KS         HQM  + + GSP  L S
Sbjct: 322 REDSNKRGLQASTTPKSIASAANSPHHQMQSNYSLGSPSSLSS 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,497,927
Number of Sequences: 53049
Number of extensions: 200669
Number of successful extensions: 736
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)