Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6i01
         (718 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2571|AAO41694.1|  592|Drosophila melanogaster CG5613-PB...   156   3e-38
AE014298-2570|AAF48729.1|  655|Drosophila melanogaster CG5613-PA...   156   3e-38
AY075262-1|AAL68129.1|  656|Drosophila melanogaster AT22312p pro...   151   1e-36

>AE014298-2571|AAO41694.1|  592|Drosophila melanogaster CG5613-PB,
           isoform B protein.
          Length = 592

 Score =  156 bits (378), Expect = 3e-38
 Identities = 87/242 (35%), Positives = 119/242 (49%), Gaps = 5/242 (2%)
 Frame = +3

Query: 3   VCHDMANGYHDDSTVDGTGCHHAYTFYNWAAVDIFCYFSHHLITIPPLSWINVGHAHGVK 182
           VCHDM   Y +D     +  +  Y F +W+AVD FCYFSH  +TIPP  W+N  H HGV 
Sbjct: 82  VCHDMMGNYLEDRHFHSSQKYDDYRFVHWSAVDYFCYFSHDYVTIPPCGWLNAAHRHGVP 141

Query: 183 VIGTVITEWNDGVAFWNKMLASEAVYRYFASALVSVAKVLKFDGWLLNIENQI--AKPEM 356
           V+GT I E     A  ++ LASE        AL  + +   F+GWL+N+E  +  AK   
Sbjct: 142 VVGTFIVE---ATARLDEFLASEESVESTVEALTRLCEHFGFEGWLVNVEVTVPLAKMPR 198

Query: 357 LLDFVRYFHRILHQELDDPVLIWYDSVTIQGTLIWQNGLNHKNRPFFDACDGIFTNYXXX 536
           L  FVR         +    + WYDSVT  G L WQN LN +N  FF    G   NY   
Sbjct: 199 LYRFVRQLTAATESRVPHGRVFWYDSVTDDGQLRWQNELNSRNAKFFRHSHGTLINYAWD 258

Query: 537 XXXXXXXXXXXGDRLTD---LYIGIDVWGRNFYGGGQLNTQSAVKIAHKYGCSMAIFAPA 707
                          +    +++G+DV+GR+  GG   ++   +++  K G S  IFAP 
Sbjct: 259 EGHLERSAQQVRREQSPRHRVFMGLDVFGRSRKGG--FHSWETMELIAKNGFSAGIFAPG 316

Query: 708 WS 713
           W+
Sbjct: 317 WT 318


>AE014298-2570|AAF48729.1|  655|Drosophila melanogaster CG5613-PA,
           isoform A protein.
          Length = 655

 Score =  156 bits (378), Expect = 3e-38
 Identities = 87/242 (35%), Positives = 119/242 (49%), Gaps = 5/242 (2%)
 Frame = +3

Query: 3   VCHDMANGYHDDSTVDGTGCHHAYTFYNWAAVDIFCYFSHHLITIPPLSWINVGHAHGVK 182
           VCHDM   Y +D     +  +  Y F +W+AVD FCYFSH  +TIPP  W+N  H HGV 
Sbjct: 145 VCHDMMGNYLEDRHFHSSQKYDDYRFVHWSAVDYFCYFSHDYVTIPPCGWLNAAHRHGVP 204

Query: 183 VIGTVITEWNDGVAFWNKMLASEAVYRYFASALVSVAKVLKFDGWLLNIENQI--AKPEM 356
           V+GT I E     A  ++ LASE        AL  + +   F+GWL+N+E  +  AK   
Sbjct: 205 VVGTFIVE---ATARLDEFLASEESVESTVEALTRLCEHFGFEGWLVNVEVTVPLAKMPR 261

Query: 357 LLDFVRYFHRILHQELDDPVLIWYDSVTIQGTLIWQNGLNHKNRPFFDACDGIFTNYXXX 536
           L  FVR         +    + WYDSVT  G L WQN LN +N  FF    G   NY   
Sbjct: 262 LYRFVRQLTAATESRVPHGRVFWYDSVTDDGQLRWQNELNSRNAKFFRHSHGTLINYAWD 321

Query: 537 XXXXXXXXXXXGDRLTD---LYIGIDVWGRNFYGGGQLNTQSAVKIAHKYGCSMAIFAPA 707
                          +    +++G+DV+GR+  GG   ++   +++  K G S  IFAP 
Sbjct: 322 EGHLERSAQQVRREQSPRHRVFMGLDVFGRSRKGG--FHSWETMELIAKNGFSAGIFAPG 379

Query: 708 WS 713
           W+
Sbjct: 380 WT 381


>AY075262-1|AAL68129.1|  656|Drosophila melanogaster AT22312p
           protein.
          Length = 656

 Score =  151 bits (365), Expect = 1e-36
 Identities = 85/242 (35%), Positives = 117/242 (48%), Gaps = 5/242 (2%)
 Frame = +3

Query: 3   VCHDMANGYHDDSTVDGTGCHHAYTFYNWAAVDIFCYFSHHLITIPPLSWINVGHAHGVK 182
           VCHDM   Y +D     +  +  Y F +W+AVD FCYFSH  +TIPP  W+N  H HGV 
Sbjct: 146 VCHDMMGNYLEDRHFYSSQKYDDYRFVHWSAVDYFCYFSHDYVTIPPCGWLNAAHRHGVP 205

Query: 183 VIGTVITEWNDGVAFWNKMLASEAVYRYFASALVSVAKVLKFDGWLLNIENQI--AKPEM 356
           V+GT I E     A  ++ L SE        AL  + +   F+GWL+N+E  +  AK   
Sbjct: 206 VLGTFIVE---ATARLDEFLVSEESVESTVEALTRLCEHFGFEGWLVNVEVTVPLAKMPS 262

Query: 357 LLDFVRYFHRILHQELDDPVLIWYDSVTIQGTLIWQNGLNHKNRPFFDACDGIFTNYXXX 536
           L  FVR         +    + WYDSVT  G L WQN LN +N  FF    G   NY   
Sbjct: 263 LYRFVRQLTAATESRVPHGRVFWYDSVTDDGQLRWQNELNSRNAEFFRHSHGTLINYAWD 322

Query: 537 XXXXXXXXXXXGDRLTD---LYIGIDVWGRNFYGGGQLNTQSAVKIAHKYGCSMAIFAPA 707
                          +    +++G+DV+GR+  GG   ++   +++  K G S  I AP 
Sbjct: 323 EGHLERSAQQVRREQSPRHRVFMGLDVFGRSRKGG--FHSWETMELIAKNGFSAGILAPG 380

Query: 708 WS 713
           W+
Sbjct: 381 WT 382


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,919,596
Number of Sequences: 53049
Number of extensions: 818976
Number of successful extensions: 2583
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2572
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)