Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6i01
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-10|AAC46644.3| 294|Caenorhabditis elegans Hypothetical p... 182 2e-46
U13070-8|AAN84828.1| 433|Caenorhabditis elegans Hypothetical pr... 182 2e-46
AB079783-1|BAB84821.1| 433|Caenorhabditis elegans endo-beta-N-a... 182 2e-46
U13070-9|AAU05578.1| 388|Caenorhabditis elegans Hypothetical pr... 171 3e-43
Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical pr... 32 0.36
X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger pro... 32 0.36
AF125965-2|AAL38961.1| 366|Caenorhabditis elegans Hypothetical ... 29 2.5
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL132876-15|CAD21668.2| 722|Caenorhabditis elegans Hypothetical... 28 7.7
AB096636-1|BAC76736.1| 722|Caenorhabditis elegans tyrosyl-tRNA ... 28 7.7
>U13070-10|AAC46644.3| 294|Caenorhabditis elegans Hypothetical
protein F01F1.10a protein.
Length = 294
Score = 182 bits (444), Expect = 2e-46
Identities = 93/241 (38%), Positives = 129/241 (53%), Gaps = 5/241 (2%)
Frame = +3
Query: 3 VCHDMANGYHDDSTVDGTGCH---HAYTFYNWAAVDIFCYFSHHLITIPPLSWINVGHAH 173
VCHDM GY ++ + +G + Y F NW +DIF YFSHH +TIPP + + H H
Sbjct: 42 VCHDMRGGYLEEESTEGKKFEKDRYPYMFLNWWQIDIFNYFSHHFVTIPPEDYTRIAHKH 101
Query: 174 GVKVIGTVITEWNDGVAFWNKMLASEAVYRYFASALVSVAKVLKFDGWLLNIENQI--AK 347
GV +GT ITEW G +K+L +E LV+VA+ FDGWL+NIEN+I K
Sbjct: 102 GVLSLGTFITEWIPGYDICSKILENEGSVEKTVDCLVAVARFFGFDGWLINIENKIDAGK 161
Query: 348 PEMLLDFVRYFHRILHQELDDPVLIWYDSVTIQGTLIWQNGLNHKNRPFFDACDGIFTNY 527
++L+ F + ++ +IWYDSV G L WQN LN NR F+DACD I+ NY
Sbjct: 162 IDLLIQFCSSLTEKSKKMNENSKVIWYDSVLDNGKLHWQNELNEMNRKFYDACDAIYLNY 221
Query: 528 XXXXXXXXXXXXXXGDRLTDLYIGIDVWGRNFYGGGQLNTQSAVKIAHKYGCSMAIFAPA 707
L +++GIDVW R G+ + + +A + S+A+FAP
Sbjct: 222 NWKDKELLRSAEF--GVLDRIFVGIDVWARGCV--GEFHCDQSFALAKLFHMSVALFAPG 277
Query: 708 W 710
W
Sbjct: 278 W 278
>U13070-8|AAN84828.1| 433|Caenorhabditis elegans Hypothetical
protein F01F1.10b protein.
Length = 433
Score = 182 bits (444), Expect = 2e-46
Identities = 93/241 (38%), Positives = 129/241 (53%), Gaps = 5/241 (2%)
Frame = +3
Query: 3 VCHDMANGYHDDSTVDGTGCH---HAYTFYNWAAVDIFCYFSHHLITIPPLSWINVGHAH 173
VCHDM GY ++ + +G + Y F NW +DIF YFSHH +TIPP + + H H
Sbjct: 42 VCHDMRGGYLEEESTEGKKFEKDRYPYMFLNWWQIDIFNYFSHHFVTIPPEDYTRIAHKH 101
Query: 174 GVKVIGTVITEWNDGVAFWNKMLASEAVYRYFASALVSVAKVLKFDGWLLNIENQI--AK 347
GV +GT ITEW G +K+L +E LV+VA+ FDGWL+NIEN+I K
Sbjct: 102 GVLSLGTFITEWIPGYDICSKILENEGSVEKTVDCLVAVARFFGFDGWLINIENKIDAGK 161
Query: 348 PEMLLDFVRYFHRILHQELDDPVLIWYDSVTIQGTLIWQNGLNHKNRPFFDACDGIFTNY 527
++L+ F + ++ +IWYDSV G L WQN LN NR F+DACD I+ NY
Sbjct: 162 IDLLIQFCSSLTEKSKKMNENSKVIWYDSVLDNGKLHWQNELNEMNRKFYDACDAIYLNY 221
Query: 528 XXXXXXXXXXXXXXGDRLTDLYIGIDVWGRNFYGGGQLNTQSAVKIAHKYGCSMAIFAPA 707
L +++GIDVW R G+ + + +A + S+A+FAP
Sbjct: 222 NWKDKELLRSAEF--GVLDRIFVGIDVWARGCV--GEFHCDQSFALAKLFHMSVALFAPG 277
Query: 708 W 710
W
Sbjct: 278 W 278
>AB079783-1|BAB84821.1| 433|Caenorhabditis elegans
endo-beta-N-acetylglucosaminidase protein.
Length = 433
Score = 182 bits (444), Expect = 2e-46
Identities = 93/241 (38%), Positives = 129/241 (53%), Gaps = 5/241 (2%)
Frame = +3
Query: 3 VCHDMANGYHDDSTVDGTGCH---HAYTFYNWAAVDIFCYFSHHLITIPPLSWINVGHAH 173
VCHDM GY ++ + +G + Y F NW +DIF YFSHH +TIPP + + H H
Sbjct: 42 VCHDMRGGYLEEESTEGKKFEKDRYPYMFLNWWQIDIFNYFSHHFVTIPPEDYTRIAHKH 101
Query: 174 GVKVIGTVITEWNDGVAFWNKMLASEAVYRYFASALVSVAKVLKFDGWLLNIENQI--AK 347
GV +GT ITEW G +K+L +E LV+VA+ FDGWL+NIEN+I K
Sbjct: 102 GVLSLGTFITEWIPGYDICSKILENEGSVEKTVDCLVAVARFFGFDGWLINIENKIDAGK 161
Query: 348 PEMLLDFVRYFHRILHQELDDPVLIWYDSVTIQGTLIWQNGLNHKNRPFFDACDGIFTNY 527
++L+ F + ++ +IWYDSV G L WQN LN NR F+DACD I+ NY
Sbjct: 162 IDLLIQFCSSLTEKSKKMNENSKVIWYDSVLDNGKLHWQNELNEMNRKFYDACDAIYLNY 221
Query: 528 XXXXXXXXXXXXXXGDRLTDLYIGIDVWGRNFYGGGQLNTQSAVKIAHKYGCSMAIFAPA 707
L +++GIDVW R G+ + + +A + S+A+FAP
Sbjct: 222 NWKDKELLRSAEF--GVLDRIFVGIDVWARGCV--GEFHCDQSFALAKLFHMSVALFAPG 277
Query: 708 W 710
W
Sbjct: 278 W 278
>U13070-9|AAU05578.1| 388|Caenorhabditis elegans Hypothetical
protein F01F1.10c protein.
Length = 388
Score = 171 bits (417), Expect = 3e-43
Identities = 89/237 (37%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Frame = +3
Query: 15 MANGYHDDSTVDGTGCH---HAYTFYNWAAVDIFCYFSHHLITIPPLSWINVGHAHGVKV 185
M GY ++ + +G + Y F NW +DIF YFSHH +TIPP + + H HGV
Sbjct: 1 MRGGYLEEESTEGKKFEKDRYPYMFLNWWQIDIFNYFSHHFVTIPPEDYTRIAHKHGVLS 60
Query: 186 IGTVITEWNDGVAFWNKMLASEAVYRYFASALVSVAKVLKFDGWLLNIENQI--AKPEML 359
+GT ITEW G +K+L +E LV+VA+ FDGWL+NIEN+I K ++L
Sbjct: 61 LGTFITEWIPGYDICSKILENEGSVEKTVDCLVAVARFFGFDGWLINIENKIDAGKIDLL 120
Query: 360 LDFVRYFHRILHQELDDPVLIWYDSVTIQGTLIWQNGLNHKNRPFFDACDGIFTNYXXXX 539
+ F + ++ +IWYDSV G L WQN LN NR F+DACD I+ NY
Sbjct: 121 IQFCSSLTEKSKKMNENSKVIWYDSVLDNGKLHWQNELNEMNRKFYDACDAIYLNYNWKD 180
Query: 540 XXXXXXXXXXGDRLTDLYIGIDVWGRNFYGGGQLNTQSAVKIAHKYGCSMAIFAPAW 710
L +++GIDVW R G+ + + +A + S+A+FAP W
Sbjct: 181 KELLRSAEF--GVLDRIFVGIDVWARGCV--GEFHCDQSFALAKLFHMSVALFAPGW 233
>Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical
protein F52E10.1 protein.
Length = 1201
Score = 32.3 bits (70), Expect = 0.36
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Frame = +3
Query: 135 IPPLSWINVGHAH-GVKVIGTVITEWNDGVAFW--NKMLASEAVYRYFASALVSVAKVLK 305
+PPLS V H G + T++ + D +W NK L +E +++ + + +V+K
Sbjct: 644 LPPLSTPVVVCFHCGTRCHYTLLHDHLDYCHYWPRNKRLVNEEFHKWKKNGCRNTWRVMK 703
Query: 306 FDGWLLNIENQIAKPEM---LLDFVRYFHRILHQELDDPVLIWYDSVTIQ 446
+ IE E +LD+ YF ++ D + W D TI+
Sbjct: 704 SVAEAMQIEVPFISEEQYSKILDYHTYFCNDTRYKVQDSINNWNDCSTIR 753
>X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger
protein protein.
Length = 1203
Score = 32.3 bits (70), Expect = 0.36
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Frame = +3
Query: 135 IPPLSWINVGHAH-GVKVIGTVITEWNDGVAFW--NKMLASEAVYRYFASALVSVAKVLK 305
+PPLS V H G + T++ + D +W NK L +E +++ + + +V+K
Sbjct: 646 LPPLSTPVVVCFHCGTRCHYTLLHDHLDYCHYWPRNKRLVNEEFHKWKKNGCRNTWRVMK 705
Query: 306 FDGWLLNIENQIAKPEM---LLDFVRYFHRILHQELDDPVLIWYDSVTIQ 446
+ IE E +LD+ YF ++ D + W D TI+
Sbjct: 706 SVAEAMQIEVPFISEEQYSKILDYHTYFCNDTRYKVQDSINNWNDCSTIR 755
>AF125965-2|AAL38961.1| 366|Caenorhabditis elegans Hypothetical
protein H43I07.2 protein.
Length = 366
Score = 29.5 bits (63), Expect = 2.5
Identities = 26/86 (30%), Positives = 36/86 (41%)
Frame = -3
Query: 401 FLVQNSMEITDKVQ*HLRFGYLILYIEKPSIKLKDLGDGDQSTGEISVHCFRGQHFIPKR 222
+L QN+ I D+V H R G L L ++ + + E V C P +
Sbjct: 100 YLYQNTSVIQDEVLCH-RLGLLPLRVDPRGFQFPK--EKVVGINEKGVDCDEEPEGDPAK 156
Query: 221 NPIVPLRYHCTDNFDAVRVANIDPAQ 144
N I + CT N +AV A DP Q
Sbjct: 157 NLIFKINVSCTKNRNAVPTAT-DPKQ 181
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
F54B3.1b protein.
Length = 3394
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +3
Query: 258 YRYFASALVSVAKVLKFDGWLLNIENQIAKPEMLLDFVRYFHRILHQELDDPVLIWYDSV 437
Y A+ K++ F + +I +M + + FH + E D VLIW D +
Sbjct: 2589 YSIHKEAVDCTNKIVGFHNAKSRLLREIGLHKMGITHLSPFHTEPNNEYDYEVLIWTDPM 2648
Query: 438 TIQGTLIWQNGLNHKNRPFF---DACDGIF 518
T+ + + ++HK P F C IF
Sbjct: 2649 TL---ISKEFPMDHKTPPQFMREPQCSNIF 2675
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
F54B3.1a protein.
Length = 3396
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +3
Query: 258 YRYFASALVSVAKVLKFDGWLLNIENQIAKPEMLLDFVRYFHRILHQELDDPVLIWYDSV 437
Y A+ K++ F + +I +M + + FH + E D VLIW D +
Sbjct: 2589 YSIHKEAVDCTNKIVGFHNAKSRLLREIGLHKMGITHLSPFHTEPNNEYDYEVLIWTDPM 2648
Query: 438 TIQGTLIWQNGLNHKNRPFF---DACDGIF 518
T+ + + ++HK P F C IF
Sbjct: 2649 TL---ISKEFPMDHKTPPQFMREPQCSNIF 2675
>AL132876-15|CAD21668.2| 722|Caenorhabditis elegans Hypothetical
protein Y105E8A.19 protein.
Length = 722
Score = 27.9 bits (59), Expect = 7.7
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Frame = +3
Query: 123 HLITIPPLSWIN-VGHAHGVKVIGTVITEWNDGVAFWNKMLASEAVYR---YFASALVSV 290
HL I PL I + A GV VI T++ + N+ +A A+ YF +S+
Sbjct: 417 HLGFIAPLLKIKEISDAGGVPVIATILVSPLEAFLD-NEKVAWAAIQSRAVYFREMFISL 475
Query: 291 AKVLKFDGWLLNIE-----NQIAKPEMLLDFVRYFHRILHQE 401
K LK DG L+ +E ++ E +LDF + + E
Sbjct: 476 IKHLKLDG-LVKVEIAGEHDKYLDREYVLDFYKMASAVSRDE 516
>AB096636-1|BAC76736.1| 722|Caenorhabditis elegans tyrosyl-tRNA
synthetase (cytoplasmic)protein.
Length = 722
Score = 27.9 bits (59), Expect = 7.7
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Frame = +3
Query: 123 HLITIPPLSWIN-VGHAHGVKVIGTVITEWNDGVAFWNKMLASEAVYR---YFASALVSV 290
HL I PL I + A GV VI T++ + N+ +A A+ YF +S+
Sbjct: 417 HLGFIAPLLKIKEISDAGGVPVIATILVSPLEAFLD-NEKVAWAAIQSRAVYFREMFISL 475
Query: 291 AKVLKFDGWLLNIE-----NQIAKPEMLLDFVRYFHRILHQE 401
K LK DG L+ +E ++ E +LDF + + E
Sbjct: 476 IKHLKLDG-LVKVEIAGEHDKYLDREYVLDFYKMASAVSRDE 516
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,060,376
Number of Sequences: 27780
Number of extensions: 405100
Number of successful extensions: 1231
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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