Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6h22
(645 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69978-1|CAA93818.1| 268|Anopheles gambiae serine protease prot... 42 1e-05
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 38 2e-04
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 38 2e-04
Z49813-1|CAA89967.1| 247|Anopheles gambiae serine proteinase pr... 38 3e-04
AY341206-1|AAR13770.1| 196|Anopheles gambiae SP14D1 protein. 37 5e-04
AY341209-1|AAR13773.1| 196|Anopheles gambiae SP14D1 protein. 37 6e-04
AY341208-1|AAR13772.1| 196|Anopheles gambiae SP14D1 protein. 37 6e-04
AY341207-1|AAR13771.1| 196|Anopheles gambiae SP14D1 protein. 37 6e-04
AF007166-1|AAB62929.1| 360|Anopheles gambiae serine protease 14... 37 6e-04
AJ271117-1|CAB88872.1| 355|Anopheles gambiae serine protease pr... 35 0.002
AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease pr... 32 0.018
AF045250-1|AAC02700.1| 259|Anopheles gambiae serine proteinase ... 31 0.024
Z49815-1|CAA89969.1| 237|Anopheles gambiae serine proteinase pr... 30 0.072
AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14... 28 0.22
Z32645-2|CAA83568.1| 259|Anopheles gambiae chymotrypsin-like pr... 28 0.29
Z18887-1|CAA79325.1| 259|Anopheles gambiae chymotrypsin 1 protein. 28 0.29
AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease pr... 27 0.51
AJ276486-1|CAB90818.1| 364|Anopheles gambiae serine protease pr... 27 0.51
AF203334-1|AAF19829.1| 110|Anopheles gambiae immune-responsive ... 26 1.2
Z32645-1|CAA83567.1| 258|Anopheles gambiae chymotrypsinogen-lik... 25 1.6
Z18888-1|CAA79326.1| 258|Anopheles gambiae chymotrypsin 2 protein. 25 1.6
AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine... 25 1.6
Z49814-1|CAA89968.1| 137|Anopheles gambiae serine proteinase pr... 25 2.0
DQ989011-1|ABK97612.1| 467|Anopheles gambiae gustatory receptor... 25 2.7
CR954256-10|CAJ14151.1| 548|Anopheles gambiae putative alkaline... 24 3.6
AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14... 24 3.6
CR954257-6|CAJ14157.1| 375|Anopheles gambiae RrnaAD, ribosomal ... 23 6.3
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 23 8.3
CR954256-9|CAJ14150.1| 872|Anopheles gambiae putative calcium/c... 23 8.3
AJ441131-4|CAD29633.1| 566|Anopheles gambiae putative apyrase/n... 23 8.3
AF117750-1|AAD38336.1| 380|Anopheles gambiae serine protease 18... 23 8.3
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 23 8.3
>Z69978-1|CAA93818.1| 268|Anopheles gambiae serine protease
protein.
Length = 268
Score = 42.3 bits (95), Expect = 1e-05
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 408 SGDSGSALVNCNGKTHQIGIISWN---INKYPSIAIYTNVSYYYDWI 539
SGDSG LV + + Q+GI+SW Y + ++ VSY+ DWI
Sbjct: 216 SGDSGGPLVQIDDEIVQVGIVSWGGIPCGGYKNPGVFVRVSYFIDWI 262
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 38.3 bits (85), Expect = 2e-04
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Frame = +2
Query: 2 IAILWLDRRLLFGDNVKRVII-TKTFPFTT-EAC-IAGWGLINERTKVLADQLKWGTQKL 172
IA++ L + F D V+ + + + P+ + C I+GWG +K + L+ GT L
Sbjct: 1169 IAVVVLKTPVRFNDYVQPICLPARDAPYLPGQNCTISGWGATEAGSKDSSYDLRAGTVPL 1228
Query: 173 LPKIAC---SMIG-KLYDGMYCAGS 235
LP C + G L DGM+CAG+
Sbjct: 1229 LPDSVCRRPEVYGDSLIDGMFCAGT 1253
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 38.3 bits (85), Expect = 2e-04
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Frame = +2
Query: 2 IAILWLDRRLLFGDNVKRVII-TKTFPFTT-EAC-IAGWGLINERTKVLADQLKWGTQKL 172
IA++ L + F D V+ + + + P+ + C I+GWG +K + L+ GT L
Sbjct: 1169 IAVVVLKTPVRFNDYVQPICLPARDAPYLPGQNCTISGWGATEAGSKDSSYDLRAGTVPL 1228
Query: 173 LPKIAC---SMIG-KLYDGMYCAGS 235
LP C + G L DGM+CAG+
Sbjct: 1229 LPDSVCRRPEVYGDSLIDGMFCAGT 1253
>Z49813-1|CAA89967.1| 247|Anopheles gambiae serine proteinase
protein.
Length = 247
Score = 37.9 bits (84), Expect = 3e-04
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +3
Query: 411 GDSGSALVNCNGKTHQI-GIISWNIN----KYPSIAIYTNVSYYYDWIFRN 548
GDSG L+ NG H+I GI+SW + YP +YT V+ Y W+ N
Sbjct: 190 GDSGGPLLVRNGDKHEIVGIVSWGVGCGRAGYP--GVYTRVARYLPWLRAN 238
>AY341206-1|AAR13770.1| 196|Anopheles gambiae SP14D1 protein.
Length = 196
Score = 37.1 bits (82), Expect = 5e-04
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +3
Query: 408 SGDSGSALVN-CNGKTHQIGIISWNINKY--PSI-AIYTNVSYYYDWIFRN 548
SGDSG L+ +G + IG++S+ K P + +YTNV+ Y DWI N
Sbjct: 144 SGDSGGPLMRQMSGSWYLIGVVSFGPQKCGAPGVPGVYTNVAEYVDWIKDN 194
>AY341209-1|AAR13773.1| 196|Anopheles gambiae SP14D1 protein.
Length = 196
Score = 36.7 bits (81), Expect = 6e-04
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +3
Query: 408 SGDSGSALVN-CNGKTHQIGIISWNINKY--PSI-AIYTNVSYYYDWIFRN 548
SGDSG L+ G + IG++S+ K P + +YTNV+ Y DWI N
Sbjct: 144 SGDSGGPLMRQMTGSWYLIGVVSFGPQKCGAPGVPGVYTNVAEYVDWIKDN 194
>AY341208-1|AAR13772.1| 196|Anopheles gambiae SP14D1 protein.
Length = 196
Score = 36.7 bits (81), Expect = 6e-04
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +3
Query: 408 SGDSGSALVN-CNGKTHQIGIISWNINKY--PSI-AIYTNVSYYYDWIFRN 548
SGDSG L+ G + IG++S+ K P + +YTNV+ Y DWI N
Sbjct: 144 SGDSGGPLMRQMTGSWYLIGVVSFGPQKCGAPGVPGVYTNVAEYVDWIKDN 194
>AY341207-1|AAR13771.1| 196|Anopheles gambiae SP14D1 protein.
Length = 196
Score = 36.7 bits (81), Expect = 6e-04
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +3
Query: 408 SGDSGSALVN-CNGKTHQIGIISWNINKY--PSI-AIYTNVSYYYDWIFRN 548
SGDSG L+ G + IG++S+ K P + +YTNV+ Y DWI N
Sbjct: 144 SGDSGGPLMRQMTGSWYLIGVVSFGPQKCGAPGVPGVYTNVAEYVDWIKDN 194
>AF007166-1|AAB62929.1| 360|Anopheles gambiae serine protease 14D
protein.
Length = 360
Score = 36.7 bits (81), Expect = 6e-04
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +3
Query: 408 SGDSGSALVN-CNGKTHQIGIISWNINKY--PSI-AIYTNVSYYYDWIFRN 548
SGDSG L+ G + IG++S+ K P + +YTNV+ Y DWI N
Sbjct: 308 SGDSGGPLMRQMTGSWYLIGVVSFGPQKCGAPGVPGVYTNVAEYVDWIKDN 358
>AJ271117-1|CAB88872.1| 355|Anopheles gambiae serine protease
protein.
Length = 355
Score = 35.1 bits (77), Expect = 0.002
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Frame = +3
Query: 408 SGDSGSALV-NCNGKTHQIGIISWNINK-----YPSIAIYTNVSYYYDWIFRN 548
+GDSG L+ G + IG++S+ ++K YP + YTNV Y DWI N
Sbjct: 303 TGDSGGPLMAKSAGAWYLIGVVSFGLSKCGTAGYPGV--YTNVVEYLDWIESN 353
>AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease
protein.
Length = 435
Score = 31.9 bits (69), Expect = 0.018
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +3
Query: 411 GDSGSALVNC--NGKTHQIGIISWNIN--KYPSIAIYTNVSYYYDWIFRN 548
GDSG L+ N + +GI+SW I + IYT VS Y WI N
Sbjct: 383 GDSGGPLMIQLPNRRWAVVGIVSWGIRCGEANHPGIYTRVSSYVRWIIEN 432
>AF045250-1|AAC02700.1| 259|Anopheles gambiae serine proteinase
protein.
Length = 259
Score = 31.5 bits (68), Expect = 0.024
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +2
Query: 2 IAILWLDRRLLFGDNVKRV-IITK-TFPFTTEACIAGWGLINERTK-VLADQLKWGTQKL 172
I +L L L N+K + + TK T A AGWG I++ + + D+L L
Sbjct: 118 IGVLQLSHPLDLTRNIKTMRLATKDTLIHQKIAKFAGWGSISKTWEDIYPDKLMKVNLIL 177
Query: 173 LPKIACSMIGKLYDGMYCAGSFNKKT 250
+ C IGK+ + CAG + T
Sbjct: 178 RTEEDCQTIGKIDETQICAGGYKNVT 203
Score = 31.5 bits (68), Expect = 0.024
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +3
Query: 408 SGDSGSAL-VNCNGKTHQIGIISWNINKYPSIA--IYTNVSYYYDWI 539
+ DSG L V +G+ QIG++S+ + +Y++V Y++DWI
Sbjct: 206 TADSGGPLTVTIDGEQMQIGVLSYGEKPCQARLPIVYSSVMYFHDWI 252
>Z49815-1|CAA89969.1| 237|Anopheles gambiae serine proteinase
protein.
Length = 237
Score = 29.9 bits (64), Expect = 0.072
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +3
Query: 411 GDSGSAL-VNCNGKTHQIGIISWNIN----KYPSIAIYTNVSYYYDWIFRN 548
GDSG L V + +GI+SW YP + YT V+ Y +WI N
Sbjct: 177 GDSGGPLNVGDSNFRELVGIVSWGEGCARPNYPGV--YTRVTRYLNWIKSN 225
>AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14A
protein.
Length = 365
Score = 28.3 bits (60), Expect = 0.22
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +3
Query: 408 SGDSGSALVNCNGKTHQIGIISWN----INKYPSIAIYTNVSYYYDWIFRNFK 554
SGDSG L+ Q G+IS+ + +P + YT VS Y WI +N +
Sbjct: 314 SGDSGGPLMVKRFYWIQEGVISFGNQCALEGWPGV--YTRVSSYLGWIRQNIR 364
>Z32645-2|CAA83568.1| 259|Anopheles gambiae chymotrypsin-like
protease ANCHYM1 protein.
Length = 259
Score = 27.9 bits (59), Expect = 0.29
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 408 SGDSGSALVNCNGKTHQIGIISWNIN---KYPSIAIYTNVSYYYDWI 539
+GDSG LV GK +G++++ + YP + VSYY+DW+
Sbjct: 209 NGDSGGPLVY-EGKL--VGVVNFGVPCALGYPDG--FARVSYYHDWV 250
>Z18887-1|CAA79325.1| 259|Anopheles gambiae chymotrypsin 1 protein.
Length = 259
Score = 27.9 bits (59), Expect = 0.29
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 408 SGDSGSALVNCNGKTHQIGIISWNIN---KYPSIAIYTNVSYYYDWI 539
+GDSG LV GK +G++++ + YP + VSYY+DW+
Sbjct: 209 NGDSGGPLVY-EGKL--VGVVNFGVPCALGYPDG--FARVSYYHDWV 250
>AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease
protein.
Length = 375
Score = 27.1 bits (57), Expect = 0.51
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 411 GDSGSALVNC-NGKTHQIGIIS--W-NINKYPSIAIYTNVSYYYDWIFR 545
GDSG L+ G + GI S W + +YTN+S+Y W+ R
Sbjct: 319 GDSGGPLMEAVGGVWYLAGITSFGWPRCGRDGVPGVYTNISHYMGWLER 367
>AJ276486-1|CAB90818.1| 364|Anopheles gambiae serine protease
protein.
Length = 364
Score = 27.1 bits (57), Expect = 0.51
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +3
Query: 411 GDSGSALVN-CNGKTHQIGIISWNINKYPSI---AIYTNVSYYYDWI 539
GDSG L+ G IG++S+ + +YTNV+ Y DW+
Sbjct: 308 GDSGGPLMREVRGGWFLIGVVSFGARFCGTQNLPGVYTNVAKYLDWM 354
>AF203334-1|AAF19829.1| 110|Anopheles gambiae immune-responsive
serine protease-relatedprotein ISPR5 protein.
Length = 110
Score = 25.8 bits (54), Expect = 1.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 501 AIYTNVSYYYDWI 539
AIYT VS YY WI
Sbjct: 96 AIYTRVSEYYPWI 108
>Z32645-1|CAA83567.1| 258|Anopheles gambiae chymotrypsinogen-like
protease ANCHYM2 protein.
Length = 258
Score = 25.4 bits (53), Expect = 1.6
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 408 SGDSGSALVNCNGKTHQIGIISWNI---NKYPSIAIYTNVSYYYDWI 539
+GDSG LV GK +G++++ + +P + VSYY++W+
Sbjct: 209 NGDSGGPLVY-EGKL--VGVVNFGVPCGRGFPDG--FARVSYYHEWV 250
>Z18888-1|CAA79326.1| 258|Anopheles gambiae chymotrypsin 2 protein.
Length = 258
Score = 25.4 bits (53), Expect = 1.6
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 408 SGDSGSALVNCNGKTHQIGIISWNI---NKYPSIAIYTNVSYYYDWI 539
+GDSG LV GK +G++++ + +P + VSYY++W+
Sbjct: 209 NGDSGGPLVY-EGKL--VGVVNFGVPCGRGFPDG--FARVSYYHEWV 250
>AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine
protease protein.
Length = 405
Score = 25.4 bits (53), Expect = 1.6
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = +3
Query: 408 SGDSGSALVNCNGKT---HQIGIISWNINKYPSIA---IYTNVSYYYDWI 539
+GDSGS L++ + K + GI+S + +YTNV +Y WI
Sbjct: 350 AGDSGSPLMSYDMKRAIWYITGIVSLGVRGCGVEGLPGVYTNVHHYLPWI 399
>Z49814-1|CAA89968.1| 137|Anopheles gambiae serine proteinase
protein.
Length = 137
Score = 25.0 bits (52), Expect = 2.0
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 459 IGIISWNINKYP-SIAIYTNVSYYYDWI 539
+G++S+ S +YT VS Y DWI
Sbjct: 62 VGVVSFGTPCVEGSTGVYTRVSSYLDWI 89
>DQ989011-1|ABK97612.1| 467|Anopheles gambiae gustatory receptor 22
protein.
Length = 467
Score = 24.6 bits (51), Expect = 2.7
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +2
Query: 50 KRVIITKTFPFTTEACIAGWGL 115
K ++ K +P T CI W L
Sbjct: 192 KPIVFPKLYPITWTLCIVSWSL 213
>CR954256-10|CAJ14151.1| 548|Anopheles gambiae putative alkaline
phosphatase protein.
Length = 548
Score = 24.2 bits (50), Expect = 3.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 132 KYWRTSSSGGHRNYYLKSRVQ*LENYT 212
K+W+ S HR+ Y+++RVQ LE T
Sbjct: 297 KHWQHHHSH-HRSAYVQNRVQLLETNT 322
>AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14D2
protein.
Length = 372
Score = 24.2 bits (50), Expect = 3.6
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 9/52 (17%)
Frame = +3
Query: 411 GDSGSALVNC-NGKT-----HQIGIISWNINKYPSIAI---YTNVSYYYDWI 539
GDSG L+ +G++ + IG++S+ + + + + YT +S Y DW+
Sbjct: 316 GDSGGPLMRYGDGRSSTKSWYLIGLVSFGLEQCGTDGVPGVYTRMSEYMDWV 367
>CR954257-6|CAJ14157.1| 375|Anopheles gambiae RrnaAD, ribosomal RNA
adenine dimethylaseprotein.
Length = 375
Score = 23.4 bits (48), Expect = 6.3
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 184 RVFNDWKIIRRNVLRGKLQQKNISTILVYD 273
R+F W+ + ++ R L Q+N+ + +Y+
Sbjct: 11 RIFPRWRSAQTSLCRTILLQRNVRNLRLYE 40
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 23.0 bits (47), Expect = 8.3
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +3
Query: 111 DLLTKEPKYWRTSSSGGHRNYYLKSRVQ*LENYTTECTAREAS 239
D L K+PK+W + G+ K Q T C +E S
Sbjct: 1192 DWLVKDPKHWPKNIESGNTCETAKEEKQ--TKTTLTCMVKEES 1232
>CR954256-9|CAJ14150.1| 872|Anopheles gambiae putative
calcium/calmodulin-dependentprotein kinase, CAKI
protein.
Length = 872
Score = 23.0 bits (47), Expect = 8.3
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -1
Query: 156 HLSWSANTLVLSLISPQPAIQASV 85
H+S +A LVL +++P P + ++
Sbjct: 225 HISSNAKDLVLKMLAPNPISRPTI 248
>AJ441131-4|CAD29633.1| 566|Anopheles gambiae putative
apyrase/nucleotidase protein.
Length = 566
Score = 23.0 bits (47), Expect = 8.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 59 IITKTFPFTTEACIAGWGLINERTKVLADQ 148
+ T+ P E CI G+G + R K L +
Sbjct: 68 VSTRCKPDEGERCIGGYGRVVSRVKSLQQE 97
>AF117750-1|AAD38336.1| 380|Anopheles gambiae serine protease 18D
protein.
Length = 380
Score = 23.0 bits (47), Expect = 8.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 501 AIYTNVSYYYDWI 539
AIYT V Y DWI
Sbjct: 362 AIYTKVHPYLDWI 374
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 23.0 bits (47), Expect = 8.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 114 SPQPAIQASVVNGNVFVIITRFTLSPNNNLRS 19
SPQP++ + V NG+ R TL+ + R+
Sbjct: 148 SPQPSMASVVANGDTASTSHRVTLTQSQYRRA 179
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,106
Number of Sequences: 2352
Number of extensions: 13209
Number of successful extensions: 79
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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