Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6h22
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF478687-1|AAL78657.1| 776|Caenorhabditis elegans systemic RNAi... 32 0.40
AF101305-9|AAF98593.3| 776|Caenorhabditis elegans Systemic rna ... 32 0.40
L10986-12|AAA28011.1| 197|Caenorhabditis elegans Hypothetical p... 29 3.7
Z82077-5|CAB63333.1| 783|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81143-7|CAB03517.2| 383|Caenorhabditis elegans Hypothetical pr... 28 4.9
AC084158-16|AAK68571.2| 347|Caenorhabditis elegans Hypothetical... 28 6.5
Z81530-2|CAB04306.1| 359|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 27 8.6
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81121-3|CAJ80825.1| 501|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z70308-15|CAJ80814.1| 501|Caenorhabditis elegans Hypothetical p... 27 8.6
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 27 8.6
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 27 8.6
Z70308-8|CAJ76942.1| 475|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z70308-7|CAA94352.1| 508|Caenorhabditis elegans Hypothetical pr... 27 8.6
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 27 8.6
>AF478687-1|AAL78657.1| 776|Caenorhabditis elegans systemic RNAi
enabling proteinSID-1 protein.
Length = 776
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -1
Query: 369 DISNAVPLSVTKKTASFIYKNKLTENVF*IVKIIY*DGRDVFLLKLPAQY 220
++ + L +TK A + +K ++ I+++ +GRD FLLKLP Y
Sbjct: 62 ELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVY 111
>AF101305-9|AAF98593.3| 776|Caenorhabditis elegans Systemic rna
interference defectiveprotein 1 protein.
Length = 776
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -1
Query: 369 DISNAVPLSVTKKTASFIYKNKLTENVF*IVKIIY*DGRDVFLLKLPAQY 220
++ + L +TK A + +K ++ I+++ +GRD FLLKLP Y
Sbjct: 62 ELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVY 111
>L10986-12|AAA28011.1| 197|Caenorhabditis elegans Hypothetical
protein F10E9.1 protein.
Length = 197
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 453 HQIGIISWNINKYPSIAIYTNVSYY-YDWIFRNFKLLYC 566
H +GI+ + NKY I+I V YY + +F + L+C
Sbjct: 124 HNLGIMGFKDNKYNDISIIWFVYYYNFMLVFLAIQRLFC 162
>Z82077-5|CAB63333.1| 783|Caenorhabditis elegans Hypothetical
protein W09C5.7 protein.
Length = 783
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +2
Query: 41 DNVKRVIITKTFPF---TTEACIAGWGLIN 121
+N+ R++ T+T F T + IAGWGLIN
Sbjct: 538 ENISRMV-TETIQFLVPTQQTVIAGWGLIN 566
>Z81143-7|CAB03517.2| 383|Caenorhabditis elegans Hypothetical
protein ZK265.5 protein.
Length = 383
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 432 VNCNGKTHQIGIISWNINKYPSIAIYTNVSYYY 530
+ CN + H G S N + SI I N+ Y+Y
Sbjct: 104 IKCNDECHHFGRCSVAKNMFDSIFIAANMRYHY 136
>AC084158-16|AAK68571.2| 347|Caenorhabditis elegans Hypothetical
protein Y69A2AR.26 protein.
Length = 347
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 304 LVFINKACCFLGHGKWYCIRN 366
LVF + C G KWYC+RN
Sbjct: 42 LVFFRRMTC--GEKKWYCLRN 60
>Z81530-2|CAB04306.1| 359|Caenorhabditis elegans Hypothetical
protein F36D1.2 protein.
Length = 359
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 423 SALVNCNGKTHQIGIISWNINKYPSIAIYTNVSYYY 530
S ++C+ + H +G S+ NK+ I I + Y+Y
Sbjct: 81 SKAIDCDDECHHLGRCSFEKNKFDPIFISAIMRYHY 116
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = -1
Query: 222 YIPSYNFPIIEHAILGSNFCVPHLSWSANTLVLSLISPQPAIQASVVNGNVFVIITRFTL 43
YI S F ILG+ + +P WS ++ L++ P + N + +II +
Sbjct: 621 YIQS-RFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGM 679
Query: 42 SPNNNLRSS 16
P +L ++
Sbjct: 680 PPPKSLETA 688
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = -1
Query: 222 YIPSYNFPIIEHAILGSNFCVPHLSWSANTLVLSLISPQPAIQASVVNGNVFVIITRFTL 43
YI S F ILG+ + +P WS ++ L++ P + N + +II +
Sbjct: 621 YIQS-RFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGM 679
Query: 42 SPNNNLRSS 16
P +L ++
Sbjct: 680 PPPKSLETA 688
>Z81121-3|CAJ80825.1| 501|Caenorhabditis elegans Hypothetical
protein F49E11.1e protein.
Length = 501
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = -1
Query: 222 YIPSYNFPIIEHAILGSNFCVPHLSWSANTLVLSLISPQPAIQASVVNGNVFVIITRFTL 43
YI S F ILG+ + +P WS ++ L++ P + N + +II +
Sbjct: 320 YIQS-RFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGM 378
Query: 42 SPNNNLRSS 16
P +L ++
Sbjct: 379 PPPKSLETA 387
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = -1
Query: 222 YIPSYNFPIIEHAILGSNFCVPHLSWSANTLVLSLISPQPAIQASVVNGNVFVIITRFTL 43
YI S F ILG+ + +P WS ++ L++ P + N + +II +
Sbjct: 621 YIQS-RFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGM 679
Query: 42 SPNNNLRSS 16
P +L ++
Sbjct: 680 PPPKSLETA 688
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = -1
Query: 222 YIPSYNFPIIEHAILGSNFCVPHLSWSANTLVLSLISPQPAIQASVVNGNVFVIITRFTL 43
YI S F ILG+ + +P WS ++ L++ P + N + +II +
Sbjct: 621 YIQS-RFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGM 679
Query: 42 SPNNNLRSS 16
P +L ++
Sbjct: 680 PPPKSLETA 688
>Z70308-15|CAJ80814.1| 501|Caenorhabditis elegans Hypothetical
protein F49E11.1e protein.
Length = 501
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = -1
Query: 222 YIPSYNFPIIEHAILGSNFCVPHLSWSANTLVLSLISPQPAIQASVVNGNVFVIITRFTL 43
YI S F ILG+ + +P WS ++ L++ P + N + +II +
Sbjct: 320 YIQS-RFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGM 378
Query: 42 SPNNNLRSS 16
P +L ++
Sbjct: 379 PPPKSLETA 387
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = -1
Query: 222 YIPSYNFPIIEHAILGSNFCVPHLSWSANTLVLSLISPQPAIQASVVNGNVFVIITRFTL 43
YI S F ILG+ + +P WS ++ L++ P + N + +II +
Sbjct: 621 YIQS-RFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGM 679
Query: 42 SPNNNLRSS 16
P +L ++
Sbjct: 680 PPPKSLETA 688
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = -1
Query: 222 YIPSYNFPIIEHAILGSNFCVPHLSWSANTLVLSLISPQPAIQASVVNGNVFVIITRFTL 43
YI S F ILG+ + +P WS ++ L++ P + N + +II +
Sbjct: 621 YIQS-RFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGM 679
Query: 42 SPNNNLRSS 16
P +L ++
Sbjct: 680 PPPKSLETA 688
>Z70308-8|CAJ76942.1| 475|Caenorhabditis elegans Hypothetical
protein F49E11.1d protein.
Length = 475
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = -1
Query: 222 YIPSYNFPIIEHAILGSNFCVPHLSWSANTLVLSLISPQPAIQASVVNGNVFVIITRFTL 43
YI S F ILG+ + +P WS ++ L++ P + N + +II +
Sbjct: 294 YIQS-RFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGM 352
Query: 42 SPNNNLRSS 16
P +L ++
Sbjct: 353 PPPKSLETA 361
>Z70308-7|CAA94352.1| 508|Caenorhabditis elegans Hypothetical
protein F49E11.1a protein.
Length = 508
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = -1
Query: 222 YIPSYNFPIIEHAILGSNFCVPHLSWSANTLVLSLISPQPAIQASVVNGNVFVIITRFTL 43
YI S F ILG+ + +P WS ++ L++ P + N + +II +
Sbjct: 327 YIQS-RFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGM 385
Query: 42 SPNNNLRSS 16
P +L ++
Sbjct: 386 PPPKSLETA 394
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = -1
Query: 222 YIPSYNFPIIEHAILGSNFCVPHLSWSANTLVLSLISPQPAIQASVVNGNVFVIITRFTL 43
YI S F ILG+ + +P WS ++ L++ P + N + +II +
Sbjct: 621 YIQS-RFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGM 679
Query: 42 SPNNNLRSS 16
P +L ++
Sbjct: 680 PPPKSLETA 688
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,858,248
Number of Sequences: 27780
Number of extensions: 313913
Number of successful extensions: 753
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -