Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6h21
         (618 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28738-2|AAA68309.4|  982|Caenorhabditis elegans Hypothetical pr...    32   0.38 
AL132876-7|CAD21659.1|  449|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z67754-1|CAA91751.1|  483|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p...    28   6.1  
AF003137-5|AAB93643.1|  491|Caenorhabditis elegans Hypothetical ...    27   8.1  

>U28738-2|AAA68309.4|  982|Caenorhabditis elegans Hypothetical
           protein T28D9.7 protein.
          Length = 982

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +1

Query: 256 KDVKYSA-ANLNAFLQRVMPGMLEQLDENKENAYESSESDED 378
           K + Y+A  ++N   Q +MP ++E+ +E+ E+  E  E DE+
Sbjct: 413 KSIDYTAWQDMNRLPQNLMPALIEEQEEDDEDDVEQEELDEN 454


>AL132876-7|CAD21659.1|  449|Caenorhabditis elegans Hypothetical
           protein Y105E8A.8 protein.
          Length = 449

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
 Frame = +1

Query: 334 ENKENAYESSESDEDNEILTA---KLVQELKVRE---VQGSGDQALSVLDLSWSNTGNSL 495
           EN    + S ++++ N  L A   + ++  K+ E   V    +    VLD  W N+G  +
Sbjct: 124 ENNNFVHFSIQNEQGNRALVASQDRFIRMYKIDETPEVIWKHNTGNLVLDSCWENSGKGV 183

Query: 496 AVSLGQKQHENWCTDNG-LIRFYTVKVSAGDKLVHSMDINE 615
             S   +  + + T+NG ++  Y  K  AGD +  +M I +
Sbjct: 184 FSSSKLRPIQLFDTENGSILGAYNGK-DAGDNITAAMSIGQ 223


>Z67754-1|CAA91751.1|  483|Caenorhabditis elegans Hypothetical
           protein C34E11.1 protein.
          Length = 483

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 210 QRRFIDDLS-YRGFDDKRRKIFGSQFKCVPPKSNAGY 317
           Q+   DD S YRGFD    K+ GS FK     SN+GY
Sbjct: 170 QKANSDDKSKYRGFDQYDMKMSGSSFK----SSNSGY 202


>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
            protein C34D4.14 protein.
          Length = 2761

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/77 (20%), Positives = 32/77 (41%)
 Frame = +1

Query: 217  GSSMTSPTEDLTTKDVKYSAANLNAFLQRVMPGMLEQLDENKENAYESSESDEDNEILTA 396
            G S+ S  +  + + +++   +L   L R MP    ++ EN+E   E    +E +   + 
Sbjct: 1725 GPSVASTGQAASAESLQHQTPSLENLLARAMPHAFGRIAENQEPEDEPMGGEESDSAASM 1784

Query: 397  KLVQELKVREVQGSGDQ 447
            +       +   GS  Q
Sbjct: 1785 RSAASSNSQMSMGSSSQ 1801


>AF003137-5|AAB93643.1|  491|Caenorhabditis elegans Hypothetical
           protein C27A12.6 protein.
          Length = 491

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 49  FCGAFVLKMWNLSGYDSEAVGFDSVAVKKTEDA 147
           FC    L+ W   GY     G+D  AVK  +DA
Sbjct: 307 FCW-MCLEPWTKHGYQYACNGYDETAVKNPQDA 338


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.315    0.129    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,334,836
Number of Sequences: 27780
Number of extensions: 260208
Number of successful extensions: 903
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)